ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4023330 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◣ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

SPATC1L
FBH1
ANKRD16
HIBADH
SP2
PKNOX1
ACAP2
GOLGA6L4
SESN1
RFX1
RAB5B
PMEL
CDK2
KDM4B
DNM2
NLK
MAF1
CYC1
WDR97
ZSWIM3
ACOT8
GOLGA6L10
SHC1
FLAD1
CKS1B
G3BP1
GTPBP6
CYTH2
KAT6B
SP1
TMEM60
PHTF2
ZNF687
DUX4
ZNF595
FRMD5
MRTFA
ZBTB32
ANKHD1-EIF4EBP3
ANKHD1
ZNF718
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
STT3A
CBX5
HNRNPA1
GOLGA6L3
PLAG1
CHCHD7
UBE2J2
DCAF7
BAZ2A
ATP5F1B
FRG2C
JUP
SUFU
ACTR1A
SLC19A1
RBM27
TRAF2
HIP1
ZNF141
CGGBP1
ZNF654
AK2
TOP1MT
RHPN1
CIC
OSBP
GATAD2A
EVI5L
SLC25A25
NAIF1
PANK2
OSBPL2
FBXO24
LRCH4
H2AZ2
FRG2
ZMYM5
TLE3
OGDH
DCTN4
RAB40C
PPIA
AKTIP
ATG9A
ANKZF1
HTT
NFE2L1
ABHD2
FAM166A
STPG3
SLC34A3
TUBB4B
TMEM45A
PWWP2A
NFATC2IP
ETV5
CD68
EIF4A1
PPP1R36
HSPA2
FKBP5
RPLP0
GCN1
PABPN1
KHSRP
RAB11B
CTTNBP2NL
ENSA
MSANTD4
BCL2L1
STK17A
PXMP4
SAP30L
NCOA2
CHD6
MAP3K3
HBP1
ELMO2
ZNF564
C7orf50
GDI2
TMEM160
MED30
PRRC2B
STIP1
TOM1L2
DRC3
SLC26A2
CEP131
FAM126A
PRC1
MPZL1
TCERG1
WFS1
XPO1
NUMB
MEAK7
GATAD2B
EPHA7
TDRKH
SFXN5
CENPA
TMEM218
MYH10
RNF34
FRYL
TNIP1
IER5L
HNRNPC
FANCF
SCAI
ZMYM2
PODNL1
DCAF15
HLTF
MTMR12
MLLT1
RRBP1
TOP2A
TRAFD1
SPRYD3
TXNDC16
GPR137C
DNAJC14
KIF1B
FMNL3
RPL36AL
MGAT2
EIF2AK3
TEPSIN
NDUFAF8
CYB5A
RAB3A
SPATA25
NEURL2
CTSA
ZSWIM1
ZNF492
JOSD1
GTPBP1
SEL1L2
MACROD2
ERCC2
HNRNPL
PHF20
YPEL2
RAB5C
TP53BP1
IGSF8
UGP2
SIPA1L2
ZSWIM4
DCUN1D4
PLCL1
IP6K1
TCF3
TRAPPC6B
PNN
PRDM11
MEF2D
KMT5C
SFXN3
PDZD7
CANX
BCAS3
EPHB3
TRIM9
CCDC61
ORC2
JPT1
IRS2
TRIM32
ASTN2
PCF11
DNAJB5
TRIM35
PTK2B
CCDC137
PDE6G
ERI3
FOXK2
EHBP1
KCTD7
CNNM2
ENPP5
RPN2
MROH8
PGAP2
RPL10
CBLB
ZNF48
MYLPF
TBC1D10B
PCDHGA1
TAF7
CRLF3
ATAD5
DAZAP2
ATF7-NPFF
ATF7
EFNB2
MYH9
PLEKHA8
MXD4
SEPTIN9
CEBPG
SYPL1
ZSCAN32
ZNF174
SEPHS2
ACTR2
UBP1
SLC25A42
KIAA0232
KLF5
ZNF281
RAB40B
DOC2A
TLCD3B
C16orf92
CDR2
ARAF
ZNF691
TLE1
ARL4A
RPUSD3
MAML1
OTULINL
PMS1
ORMDL1
MTRNR2L8
NR3C2
TSACC
CCT3
GLRX5
RPS24
POLR3A
EEA1
OSBPL3
HDGFL2
R3HDM1
ZRANB3
KIAA0513
PBX1
SP4
HESX1
APPL1
HNRNPR
GLCCI1
MTRNR2L1
ALKBH5
PODXL2
GNAZ
SPSB3
MRPS34
EME2
HGH1
GOLIM4
MRPL37
CYB5RL
PDXP
IVD
MPHOSPH8
PPP2R5A
SYP
PRICKLE3
MEGF9
MEFV
KMT5A
SLC41A1
C12orf65
PLIN3
DIAPH3
MAST4
FAM222B
CAMTA1
SLC46A3
SMAD2
ENO1
KCTD9
CDCA2
ASPH
CDH15
PPFIBP1
AGER
RNF5
AGPAT1
ZCCHC14
ENTPD7
AKAP8
TSPAN15
UVRAG
MPRIP
BAIAP2
NR2C2
MYH14
RHCE
MACO1
ECHS1
BPGM
ZNF555
MIEF2
FLII
KANSL1
FZD4
TOP2B
GET4
PPM1K
NXT1
FAM72C
JAKMIP1
ZC3H6
PITX3
GBF1
TRAPPC11
RWDD4
NCK1
LLGL1
TPCN1
IQCD
RMI1
HNRNPK
DCAF4
RPUSD1
CHTF18
SP3
RAPGEF2
TTBK2
STPG1
NIPAL3
VIPR1
RUVBL1
RAB39A
IFT27
RPS11
RPL13A
RSBN1L
GATM
SPATA5L1
MAFA
AMD1
ERAP1
TRAF7
RAB26
TMCC2
HOOK1
ITFG2
EIF5
RAB8A
LRRC56
HRAS
NUFIP2
PRMT1
SMIM22
ROGDI
OTX1
FOXO1
PEF1
ZFYVE21
XRCC3
NUBP1
PCNX3
MAP3K11
HNRNPAB
PAX9
SHKBP1
WBP1L
PC
MLH1
EPM2AIP1
IVNS1ABP
SSBP2
INTS3
HACL1
BTD
JPT2
RTRAF
DDX19B
AARS1
SRGAP2
FAM72A
NXPE3
GOLPH3L
ZBTB7A
NAXD
WBP1
INO80B
GPR108
TRIP10
MOGS
FOXN3
EIF3L
ANKRD54
HEY1
BBX
SRGAP2B
FAM72D
ME2
N6AMT1
TUBB
MDC1
GRK6
PLEKHH2
SARNP
ORMDL2
CCNG1
PIM1
GRSF1
SETD1A
ORAI3
HDAC4
MARCHF3
CIT
HSPA5
ARRDC3
SLC25A19
ANP32E
PPM1B
SPAG7
LIX1L
POLR3GL
ANKRD34A
ADRM1
COL23A1
PDPK1
CEMP1
YWHAZ
RPS5
ZNF774
CIRBP
STARD3NL
KDM6A
KBTBD3
AASDHPPT
PPP3CA
PDE6D
COPS7B
ANP32A
ZNF626
FYN
RGS9BP
ANKRD27
BAHCC1
LOC102724770
DGCR6
KSR2
SMARCD2
CFAP410
TIAM1
LOC150051
USP20
C9orf78
C16orf72
KAT7
OTUD5
SRP19
CREB3L2
ACTN1
ALKBH7
PSPN
PITPNM1
PCGF2
OPA3
PSKH1
NRN1L
TDP1
EFCAB11
ZNF443
ZNF724
TSKS
AP2A1
CCDC153
TSEN54
LLGL2
CASKIN2
TANGO2
ARVCF
GNA12
IL6ST
WDR74
STX5
ZNF200
DNAJC27
NUPR2
CHCHD2
IGSF9B
SDC2
CREBRF
MIA3
INIP
PADI2
COQ7
DAPK3
SLC39A1
CREB3L4
CRTC2
PTPN13
ZC2HC1C
ACYP1
PRKD2
GPR158
RGS14
LMAN2
LMTK2
ESR2
ATP7B
ALG11
MTOR
APOA2
TOMM40L
C22orf39
ZNF563
C5orf38
IRX2
RGMB
AKAP5
FMN1
MROH1
SLC25A28
BAZ1B
MRPL20
CCNL2
GAS2L3
PDP2
CNOT3
LIN37
PROSER3
HSPB6
TOM1
GLCE
SELENOO
TYW1
SBDS
AKAP13
TMEM53
ARMH1
GALNT18
F11R
ZDHHC24
ACTN3
FAM111B
GRPEL1
LINC02210-CRHR1
LOC100129484
TNRC18
ACTR1B
OXSR1
MAPK9
VPS35
ING1
CARS2
ATP5F1E
MUC3A
UBTD1
MMS19
DPP3
NF2
FHIT
PLCG1
JTB
RNF20
MUC20
DYNLRB1
GPBAR1
PNKD
AAMP
EIF4A2
AZIN1
RALGPS1
NBR1
TMTC4
SRGAP1
ZNF211
CNFN
RSPH4A
TNRC6B
STXBP2
XAB2
PCP2
MAMDC2
KCNAB2
GDI1
ATP6AP1
ZNF367
PSENEN
ZNF493
UBFD1
EARS2
PDIA6
MBIP
ITSN1
CRYZL1
EFNA3
ABCA7
CAND1
STAT3
CCDC102A
ADGRG5
PER2
PBX3
PGK1
SORT1
SLC39A3
HMGN1
MAPK8IP3
SPC24
GFPT1
RFX2
DRAP1
C11orf68
RTTN
SLF2
PRKACA
NADSYN1
DHCR7
COPG2
FAM228B
DUSP10
SLC4A7
PFN4
YJU2
RBM4
LTN1
LCORL
ARL17B
ARL17A
FICD
PCYOX1L
FGFR3
FKBP3
FANCM
PRSS16
PCP4L1
INPP5B
DPY19L3
SUN2
OTUB2
ZNRF2
PACSIN2
CREB3L3
CHD8
C19orf81
MRPL34
DDA1
ABHD8
POLD2
SCAMP2
ZBTB18
BBS12
NFIL3
BBS10
RBM15
ZBTB25
ZBTB1
DMBX1
FAM53C
CDC25C
DDX11
ZNF77
GNA11
KMT5B
ZBTB20
LAMTOR1
ANAPC15
FKBP8
SUZ12
MED7
DNAL4
RWDD2B
USP16
NSD3
LETM2
SMARCA2
MACROD1
ZNF823
AP5Z1
KLHL25
MAF
CHPF2
ABCF2
PGD
PPP6R3
NGDN
HNRNPLL
NEMP1
TBC1D10A
NAB2
GLIS1
TERT
SLC15A4
FAM174C
CPT1A
TRIM45
RRAGC
BUB3
HMX2
HDAC11
STARD5
NOVA1
ZNF341
COPZ1
MAFB
ID2
AMER1
TLE2
YIF1A
TMEM151A
PRKCI
KMT2A
MAP11
LAMTOR4
PRDM15
TEN1
ACOX1
ZNF441
CNTN1
RPL18A
MCM3
H4-16
H2AJ
STX7
MEX3C
RAB22A
HERC3
PTDSS1
MTERF3
SWSAP1
BAMBI
MAGI1
ZNF91
IL10RA
ZNF418
HS3ST3B1
MCM7
AP4M1
DGCR8
MCU
TMEM14A
HEXIM2
ZNF143
JARID2
ZNF775
WDR81
TMEM161A
TLCD2
RNF187
NEK7
ZNF44
PER3
RRP36
MEA1
KLHDC3
TMEM41A
ZBED5
SSBP3
STK11
DLGAP5
GALNT2
SAMD4B
GMFG
ATP6AP2
INAFM2
ZNF516
FOXK1
SIX2
UBE2C
INPP5A
SNX18
SLFN5
MARCHF2
PAX5
MTHFD1
ZNF440
ZNF436
EIF1
FAM76B
CEP57
KDM4A
SMDT1
PHETA2
NAGA
SYCE1L
MON1B
PRADC1
CCT7
KIAA0895L
EXOC3L1
E2F4
FAM118A
TPRG1L
NOL3
ZNF727
DDX49
COPE
SFPQ
MAD1L1
NUDT1
MRM2
HNRNPA0
CCDC91
ZNF726
C19orf48
ELAVL1
ZNF98
USP15
PCYT1A
IBA57
FUT8
CTPS1
STARD7
TMEM242
INTS9
HMBOX1
ZNF776
ZNF14
NOTCH2NLA
ARHGEF9
HAUS7
NRXN2
PRPF40A
ARL6IP6
RHOB
KANK3
GBA
DGLUCY
C1QTNF6
RPS6KA5
MAN1A1
LMO4
TYW1B
LRP10
EIF2B3
GALNT10
KANSL2
ZNF92
FOXO3
SNX25
CFAP97
BNIP3L
TSPAN31
MARCHF9
CDK4
AGAP2
CBX8
NUF2
CNTRL
ISOC2
PAFAH1B2
GPR84
HEATR5A
ITGB1BP1
CPSF3
PRDM9
OPA1
INTS10
GNAL
ECM1
ATP5PD
KCTD2
ECHDC3
ZNF66
GLRA3
ETFBKMT
USF3
FAM117A
INTS4
LANCL2
MAP2K3
LSM4
NSMCE1
EAPP
VEZT
FGD6
TTLL5
ERG28
RFWD3
HINFP
RCOR1
DDX59
BICRA
HLA-DRB1
ZNF875
GTF2A2
PSMD3
RHBDD1
NBPF1
EPB41
IRS1
ZIC3
SHPK
CTNS
GNL3L
ERV3-1-ZNF117
ERV3-1
CCDC200
YARS1
S100PBP
YBX1
PTMA
FAM161A
PJA2
SPATA33
MZF1
CDC73
CHD2
CERS6
ZNF17
LUC7L2
PGP
E4F1
PMF1-BGLAP
PMF1
SUOX
CAPSL
ZNF101
ATP13A1
USP3
PEX2
KDSR
NPIPB9
ZER1
NOTCH2
PPM1D
MRPL18
TCP1
PNLDC1
ZNF491
NUP93
RNF139
CDCA7L
SNX15
LAPTM4A
MTRES1
BCDIN3D
ANKRD18B
RFX3
KAT6A
CDON
MTFR1
TMEM9
LY6L
RAD54L
TCTEX1D2
NKX3-2
ZNF799
SPRYD7
NOTCH2NLB
NEU1
TM2D2
ADAM9
CEP152
SLC35E2A
DNAJB1
TECR
NUDT4B