ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX367328 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◣ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

SRSF7
EAPP
HEXIM1
JPT1
SRSF2
MFSD11
TAF12
JUN
ZBTB45
TRIM28
PPM1D
FAM53C
CDC25C
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
ZBTB4
SLC35G6
POLR2A
RPL5
RPL3
NGRN
RHOB
ID4
NPR1
ILF2
C15orf39
TMEM167B
EIF4G2
CIRBP
FAM174C
HNRNPAB
TUBA1B
FUS
SFPQ
PIK3R3
HSPA1B
C12orf65
BCAR3
TAF4
THADA
KLF6
TRA2B
SRSF6
POLG
H1-10
EEF1A1
RSRP1
CALR
FARSA
RAD23A
ALDOA
PPP4C
ATF4
ZC3H10
RPL41
RSPH3
RPLP1
MDM4
IQCN
JUND
PRDX1
UNK
H3-3B
EIF4A2
CDH11
SND1
SLC38A2
ZBTB37
RCC1
COQ8A
PARP16
NCOA7
POLG2
DDX5
HNRNPH1
INTS6
DUSP1
YWHAE
SOD1
TPI1
SPSB2
GTF3C6
RPS14
GTF2H5
SRCAP
LOC730183
RPS11
RPL13A
TRAF7
RAB26
HNRNPA2B1
CBX3
TMEM242
SETD5
KCTD13
INTS2
WDR1
GPR61
GNAI3
SIRT4
SESN2
COQ2
FAM219B
SEPHS2
PABPC4
GBA
RPS8
H2BU1
H2AW
KNTC1
ECI1
NUP133
CITED2
CD68
EIF4A1
TFRC
UBB
EIF5
FBXL3
RPL11
EEF2
NKIRAS1
RPL15
DNTTIP2
BTG3
CZIB
AAAS
UBE2S
RPS2
RNF151
TBL3
NDUFB10
RPL3L
VPS72
PIP5K1A
ACTB
NOL11
NASP
STMN1
ZNF143
DLG2
CBX5
HNRNPA1
SNRNP48
FSCN1
MRPS18B
ATAT1
ZBED8
OAZ1
E2F3
CALM2
LTA4H
MYLIP
MTRNR2L1
SRSF1
SLFN11
MAT2A
BAMBI
IDH2
TOB1
SMOC1
RBM26
TP53BP2
SLC27A3
PRRC2B
C19orf48
SRSF5
SPECC1L
RNF220
POLE4
S100A13
S100A1
CHTOP
SCAMP2
NDUFV3
RRP1B
HSF2BP
MAPT
LUC7L
FAM234A
RPL6
PTPN11
EFCAB2
PPIA
NFYC
HMGN2
LTN1
TUBD1
RPS6KB1
NOP14
GRK4
C16orf72
FAM166A
STPG3
TUBB4B
SIPA1L1
SV2A
DPP9
MTMR11
SF3B4
PSRC1
HSP90AA1
HSDL2
WDR74
STX5
SOD2
WTAP
CCDC200
TMEM107
ITFG2
DDX17
SLC1A5
B4GALT3
UBC
EIF1
ARIH1
MTHFS
ATP5PO
NUP214
NABP1
TBCE
RPL31
PSMC6
TSPAN3
POLR2J3
KIF5B
RPL19
CACNB1
MTHFD2
ABCA5
LUC7L2
FMC1-LUC7L2
FMC1
LSM14A
LOC105378979
LAP3
TIA1
PCYOX1
BBC3
HINT3
RBM12
CPNE1
ALOXE3
HES7
DEGS1
MKNK2
MESD
HSPA5
XBP1
DGCR8
DCPS
GADD45A
MCMBP
ALDH3A2
MTRNR2L2
MSH3
DHFR
CHRNA5
MORC3
DYNLL2
ZDHHC4
RPS15
YBX1
LIN9
FAM200B
BTBD10
SDHAF4
HEXIM2
WRAP53
TP53
DCAF8
RAB11A
UGP2
VAMP1
SRSF3
UGCG
DHX9
EIF4A3
PKM
AFF1
TRAF4
DLX1
SRRM2
GDI2
H4C2
H4C1
H3C1
H1-1
CDK1
TGOLN2
AMD1
AGL
FAM71E1
EMC10
OAZ3
MRPL9
MYBL2
NCL
ACTRT3
MYNN
CHEK1
C1QTNF6
TAF1D
C11orf54
RPP25L
DCTN3
CFAP20DC
ACAD9
CALM1
SACM1L
MCL1
TM2D3
DHRS12
TEDDM1
GLUL
PHAX
ALDH7A1
RNPS1
H2AX
DPAGT1
SNX3
TAF15
HMBS
TAOK1
ZNF771
ESR2
YWHAQ
ULBP1
STAT1
YWHAG
RBM25
KLHL11
SMYD4
RPA1
PHF10
FZD8
C6orf62
ACSL3
GGA2
COMMD4
RNF122
ZNFX1
MTF2
THOC3
GORASP2
HDAC1
TRA2A
BLOC1S5
NDUFAF3
IMPDH2
DALRD3
MANSC1
BORCS5
RCBTB2
KLC1
ARPC1A
HNRNPDL
ENOPH1
NCOA5
CENPH
USP10
ASCC1
ANAPC16
MSH6
LRIF1
H2AZ1
DNAJB14
WBP11
C12orf60
RBBP6
ID2
KIF2C
HSPA1L
HSPA1A
LSM2
TXNDC15
NCAPG
MAPK3
GDPD3
RNF146
INTS5
GANAB
RPL37A
POLR3E
PMF1-BGLAP
PMF1
LENG8
MICU2
PSMA3
MAP3K21
CEBPA
TMED4
DDX56
SPTAN1
MAD1L1
NUDT1
MRM2
MTRNR2L8
H2AZ2
UFL1
TSC22D2
BRD2
ATP1A1
NFKBIL1
DDX39B
ATP6V1G2
NXF1
AMZ2
IER5
ZSWIM7
TTC19
MSX1
MPZL1
BCLAF1
IFIT3
RPSA
USP1
ADPGK
SP1
HERPUD1
GGPS1
ARID4B
ZBTB11
RPL24
CDK12
TEX30
DYNLL1
SRSF9
SOAT1
SLC22A4
HDHD3
RPL22L1
PUM2
SLC20A1
CLSPN
HFM1
BUB3
HMX2
EXOSC9
NGB
MTF1
PUM1
EPC2
WDR35
HACD3
ING3
NEK4
ITIH1
EZR
MTMR2
PTPN6
C12orf57
RGPD1
RGPD2
FDXR
PCIF1
CKB
TRMT61A
ATF3
ZWILCH
SNAPC5
RPL4
UMPS
RPL13
ADAM17
HMGB2
UCHL1
TRIM7
MESP1
PPP6R2
DNAJC25-GNG10
DNAJC25
TCTE3
ERMARD
CLN5
GLS
LRCH3
RBM15B
MANF
RPL10A
SLIT2
ISL2
FTL
IL4I1
NUP62
ATF5
ZBED4
INTS7
DTL
DNAH14
NDEL1
PPY
PHGDH
THAP9
SEC31A
HINFP
MRPL17
ARF6
LEFTY1
DDX19B
AARS1
RTL10
GNB1L
TMEM63A
RPL29
PABPC1
KANSL2
DPY30
THUMPD2
FBF1
ZNF830
CCT6B
DMWD
PRMT2
UBA2
EPC1
TARS3
ANKRD13C
CSNK1E
TSNAX
TTLL12
TUBGCP3
PMPCA
ENTR1
DDIT4
SIL1
MAN2C1
HSP90B1
ZCCHC17
SNRNP40
ZBTB25
ZBTB1
MFSD14A
CBY3
RPAP2
GLMN
SLC16A1
BOD1L1
HIRIP3
HNRNPR
PCBP1
CHIC2
ZMYM1
HOXD13
HOXD12
EVX2
TLE3
COX20
ADAMTS1
TMSB10
PIGF
CRIPT
GNA13
CSRNP2
RPL12
LRSAM1
CD164
EXOC7
RAP1GDS1
BPHL
MSRB2
TUSC1
RPS7
PRADC1
CCT7
TMEM39B
COMMD6
FASN
YWHAH
DNMT1
ZNF627
C22orf24
MRPS21
PELP1
ARRB2
BTG1
ZBTB2
ZYG11B
FTH1
RPS19
ATXN2L
SLC25A3
ZKSCAN2
NUP188
DOLK
HSPA8
DHX15
PRKACB
CASP3
SLC5A3
MRPS6
RBMXL1
KYAT3
SLC35E2A
CCDC137
CYCS
POLR2J2
PDE6G
SOX4
POLR3B
EPM2A
LRRC37A3
PDSS2
SURF2
SURF1
RPL7A
MED22
ADM
PHF14
FAM89A
ACTN4
MCM5
CPT2
SETD9
LAG3
PTMS
SLC25A19
C7orf25
AKR1A1
TOMM20
RBM34
ZNF131
USP25
TAOK2
URB2
TAF5L
MACROH2A1
PIP4K2B
MATR3
STT3B
ATP2A2
SLC3A2
SLC7A5
NEFL
RXFP4
KHDC4
TOB2
CANX
HES1
VPS37B
MIF
CANT1
SRP68
ZACN
GALR2
ING5
PAN2
IL23A
SCAF4
FAM117B
AKAP7
MAGI3
MYL6B
MYL6
MRPL40
HIRA
RPLP0
GCN1
SLC26A2
NSUN4
HSPA6
TTC32
TEX14
RAD51C
USP38
SLC25A4
YEATS4
SMURF2
ZMYND15
MED11
CXCL16
REEP5
ARL1
IP6K1
DNAJB1
C22orf39
C15orf61
CSDE1
ATXN7L2
CYB561D1
SRSF4
PRPF38B
GPATCH3
ELOVL1
CDC20
SAE1
ZFAND5
BORCS6
SUMF2
SLC33A1
TM9SF4
CKS2
SECISBP2
ZNF3
COPS6
TBC1D22A
MCM7
AP4M1
SZT2
MED8
EZH2
PRDX3
SREBF1
SLC39A10
RBM8A
PEX11B
RPL9
LIAS
RNF149
RPL23
PPP1R8
H4C8
CLNS1A
NPIPA3
NPIPA2
ILKAP
OSTM1
PLA2G10
NAV2
MPI
SMIM13
LUC7L3
ARL6IP1
MDM2
ADI1
BCAS4
RPS15A
ATG16L2
NTMT1
C9orf50
NCKIPSD
RASSF1
ZMYND10
RPS3
H4C3
H1-6
ERO1B
SLC35F5
TUSC2
DNAJC27
LDHA
TCAIM
TIPIN
GAPDH
USP24
NT5DC1
TMEM129
TACC3
SLBP
MOB4
TBC1D2B
MYO1G
LATS1
BCL2L13
ATP6V1E1
CSE1L
IFNAR1
OGFR
TRIM13
CDKN2AIPNL
RANBP2
EIF3A
SLC16A10
MBOAT2
PRPSAP2
ZNF589
TRIM65
MRPL38
PSMG3
NARF
CYBC1
KEAP1
C21orf91
UCHL3
MAP3K3
PPP1R27
MCRIP1
STIL
OLA1
ANKRD31
UHRF1BP1L
NMT1
DCAKD
TSEN34
PYCR2
PRPF4
CDC26
ZDHHC14
MAP4K1
EIF3K
THNSL1
NSRP1
FOXO3
UBE2Z
PARN
BFAR
ZC3H4
MEF2A
GTF2A1
ACACA
SLC25A11
RNF167
PFN1
TADA2A
GP1BA
NDUFS7
H2BC21
H2AC21
H2AC20
XPO1
HACL1
BTD
BMP2K
ENO1
TBC1D4
ALG6
POLE3
C9orf43
ALAD
UBAP2L
C1orf43
MRFAP1L1
BLOC1S4
IREB2
ING1
CARS2
POU4F1
KIF5C
USP39
C2orf68
TMEM150A
SEC14L1
SGTA
THOP1
SNRNP70
CD320
GABPB2
EIF3L
ANKRD54
MRPS14
ZSCAN12
MLLT11
PPP6R1
SQSTM1
NBPF1
DBNDD2
H4-16
H2AJ
SMARCC1
HASPIN
TMEM116
ERP29
ENAH
NAXE
GPATCH4
NUCB2
UGT1A4
UGT1A3
SELENOW
KMT5B
TNRC6B
PCDH9
ARL15
PITRM1
FARP2
LZTR1
C10orf143
PHF2
RACK1
DIS3L
SRRM1
TNKS2
IPO7
SP2
TOE1
MUTYH
FBXW2
MSTO1
LYPLAL1
ZNF326
ANXA11
CCDC136
OPN1SW
HEATR1
FAM133B
IMMT
MRPL35
CNOT11
PMPCB
NPM1
SF3B1
PCGF6
MVK
PSMA4
EXOSC10
MRPS15
ZC3H6
ADIPOR2
SPRYD3
MAP2K2
RPP38
ACBD7
DIP2A
HYLS1
GEMIN4
TRIM26
VIM
CCSER1
RNF130
TBX2
VARS2
GTF2H4
MRPL39
OSCP1
BTBD1
DDX6
RNF135
SIN3B
TIMM44
TRAP1
HMGN1
ZNF574
GRIK5
MUC1
TIMELESS
MIP
CKAP2
VPS36
RPS13
RAB13
RPS27
RBSN
NUCKS1
PRRC2C
HNRNPU
ZFP36L2
UBTD1
MMS19
HNRNPD
MYDGF
TRIM25
TNFRSF10B
CSK
MICOS10-NBL1
MICOS10
TMX1
POLR2E
GPX4
CWC25
CDC6
THAP6
RPS24
POLR3A
INTS3
RPF2
ZNHIT6
CDR2
SLC25A36
ZNF839
SNRNP25
POLR3K
TXN
PPP1R12C
USP48
C2orf42
PUS7
RINT1
FAM162A
CCDC58
SIRT1
RPRD2
TNIP2
PCMT1
PRMT5
RASA2
C16orf95
FER
AUH
WNK1
PTBP1
TNPO1
PSTK
ZDHHC7
TPRA1
MCM2
ZNF282
TARBP1
RNF19B
KAT7
METTL23
JMJD6
NRDC
TMEM128
KNL1
BSG
SERTAD2