ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CPSF3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◣ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

GH1
CSHL1
RABL2B
ZNF335
RABL2A
TSN
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
MAPKAPK5
DUX4
SRD5A1
DYNC1LI2
ICE1
NUP85
NVL
CACTIN
C19orf48
VDAC2
PSMD12
REXO1
POLR3F
DZANK1
OAZ3
MRPL9
MRPS7
MIF4GD
GGA3
RWDD1
IPO13
S1PR4
NCLN
NME6
CAPRIN1
HSPA9
VPS52
RPS18
B3GALT4
UBE2I
ZC3H10
RPL41
ESYT1
GOSR2
POLR2E
GPX4
FAM187A
EFTUD2
CCDC103
TAOK3
SUDS3
SLC35B1
LYRM4
FARS2
SUCLG1
DCTN1
VTI1B
ZNF576
IRGQ
UPF2
MRPS5
ZWILCH
SNAPC5
RPL4
NNAT
BLCAP
VEZF1
PSMG2
CEP76
EXOSC5
BCKDHA
H2AZ1
DNAJB14
COX20
PSMD1
ACTR10
VARS1
CDC73
COX7A2L
RBBP5
VPS28
FRG2C
COMMD1
CCT4
SEC61B
ALG2
SCRIB
SART3
ISCU
STAM
TSNAX
PI4KB
RABGGTB
HADHB
HADHA
SKP1
POLG2
DDX5
ATP6V0C
AMDHD2
PHF23
GABARAP
DVL2
SUMF2
C6orf226
RRP36
MEA1
KLHDC3
USP1
EDC4
PES1
RPL17-C18orf32
RPL17
C18orf32
STAM2
POLR2J3
COL23A1
PDAP1
BUD31
MTRNR2L8
FARSB
RPL26
KRBA2
EPN1
NDUFA4
FRG2
TLCD1
RPL23A
RAB34
NEK8
PTGES2
ATP5F1E
ZRANB2
SYNRG
CIRBP
SELENOF
HS2ST1
H4C12
H4C11
TAF9
RAD17
AK6
SFI1
EIF4ENIF1
H2BC5
H1-4
ATP5MG
MYC
IER3
FLOT1
H1-2
PIN4
NUP205
NRAS
SUPV3L1
ZNF34
RPL8
FAM174C
SECISBP2
CKS2
RPL21
EIF2S3
H2BC21
H2AC21
H2AC20
RPLP0
PAK1IP1
GCN1
C6orf52
RPS27A
CLHC1
H2BC15
H2AC15
PNO1
PDHX
APIP
H2BC14
H2AC14
HDGF
TM9SF1
IPO4
RPS11
CTDSP1
ZBTB37
PRRT2
MAZ
MPDU1
LOC100996842
EIF4A1
CD68
TSSK4
EFNA2
MTRNR2L1
AXDND1
WDR37
IDI1
H3C3
H4C3
H1-6
RHBDL1
MRPL2
KLC4
CUL7
INPP5E
RIT1
GADD45GIP1
AKAP8
H2BC4
H2AC6
UBE2M
CHMP2A
NFKBIL1
DDX39B
ATP6V1G2
MRPL24
AVPI1
ANAPC7
KMT2A
FAM131A
GOLGA5
WDR24
STUB1
JMJD8
PAGR1
HSPA1B
MRPS16
DNAJC9
TM4SF1
TMED1
DPH7
RNASEK
C17orf49
BCL6B
RXYLT1
MVP
VPS9D1
MRTO4
EMC1
TRIM65
MRPL38
C6orf47
BAG6
APOM
NECAB3
ACTL10
ALLC
TTC8
RPS23
ATP6AP1L
THAP9
SEC31A
RCOR3
RPL13A
YJU2
SMC2
DPH6
PCBP1
NFE2
HNRNPA1
CBX5
SRSF11
GPAA1
EXOSC4
ZNF581
ZNF580
NRIP1
MMP24OS
MMP24-AS1-EDEM2
CCDC106
H3-3A
PCBD2
OR6B2
NDUFA10
EEF1A1
EIF4A2
SYCE2
PEAK3
OAZ1
H4C2
H3C2
H2AC4
SGSM3
FAM104A
C17orf80
BICRA
TMEM132A
RPL35A
LMLN
IQCG
H4C9
RPS5
RPL27A
MRI1
H4C1
C19orf53
H3C13
H2BC18
RABL6
CCDC183
GLRX2
CHD2
MRM1
DHRS11
ADK
ECI1
H2BC11
H2AC11
TIMM13
GET4
SHC1
PYGO2
PBXIP1
LOC101928120
NAT10
PIP4K2B
RAD23A
CALR
MRPS18B
ATAT1
PROCA1
RBKS
BABAM2
PACSIN3
ARFGAP2
DDIT4
ENAH
SLC25A10
MRPL12
SLC3A2
MAT2A
FADD
TBK1
MED1
CDK12
SIRT7
PCYT2
MAFG
PTMA
NUDT1
MRM2
MAD1L1
RPN1
ID3
RPL7
RDH10
EXOSC6
SGK1
LOC105372440
ACP4
NAA10
ARHGAP4
PROSER1
NHLRC3
MAPK8IP3
SNAP47
JMJD4
MAN2C1
HNRNPU
NANOS1
ABTB1
TMPPE
GLB1
DENR
TMEM230
PCNA
DONSON
RPS12
IRF2BP2
SYNGAP1
PHF1
CUTA
ASB13
DAPK3
GGA2
H3C1
H1-1
PTPN6
NDST2
C12orf57
ATN1
GTF2IRD2B
ANKLE2
SCAMP3
FAM189B
OTUD7B
BAZ2A
TARBP2
MAP3K12
MEMO1
CENPVL3
ZNF513
GTF3C4
DDX31
SF3B3
COG4
AP3M1
DPY19L4
SH2D3C
MSH4
LRRC37A3
DENND4B
TBCK
EIF2D
AIMP1
PRKAG1
MRPL40
MORC3
HIRA
PRDM10
UFM1
DRAP1
C11orf68
CCDC138
RPL22L1
HOXA3
BCAP29
ZNF341
ZBTB26
RABGAP1
KIF27
CYB561D1
ATXN7L2
TAF10
RRP8
ILK
PRELID3B
TPP1
TARS3
PFDN5
MYG1
RHOT2
DYRK1B
USP21
UFC1
PPOX
GRAMD2A
XPNPEP3
ST13
DNAJB7
CMTR1
PPARA
CISD3
MAML1
RPS2
RPL3L
RNF151
NDUFB10
MTRNR2L2
MSH3
DHFR
SNX17
WDR90
POLR2C
CDK9
CNPY2
CTNNB1
PAF1
H2BC12
H2AC12
DGKZ
NDUFAF3
DALRD3
PNMA1
HYI
ADNP
C7orf26
WDR74
ZCWPW1
PPP1R35
MEPCE
SPATC1L
CLK3
ZNF398
EGLN1
KLF12
NDUFS3
NAXE
KBTBD4
GPATCH4
FAM180B
C5orf24
GTPBP6
TBC1D13
PPFIA4
SMIM22
ROGDI
PACS1
ID2
PPP3CB
GPS2
EIF5A
CCDC34
RNF166
CTU2
AGO3
ALKBH5
MORF4L1
TOM1
TFAP2A
ADARB1
EIF2B4
LAMP1
MOV10
H4C5
H3C4
H2BC7
H2AC7
TUBB
MRPS34
MDC1
EME2
ATXN2
ZNF653
UCKL1
RPS29
LRR1
FTH1
NFAT5
RCC1
PABPN1
ZNF76
POMZP3
SURF6
LRRC24
C8orf82
BTNL9
CXorf38
BRWD1
STRIP1
SETD1A
ORAI3
UPF3A
TUBGCP6
SRF
HDAC10
RECQL4
POLDIP3
LRRC14
CCDC200
NME3
XRN1
ABHD17A
FUT11
CHCHD1
TXNRD2
PRRC2B
COMT
MAMDC2
DESI2
ATP5F1B
TRAP1
ZMIZ2
IMPDH2
H4C8
GBA
RUFY2
FLOT2
DHRS13
TMED9
RANBP6
KIAA2026
B4GALT7
PCDH9
HMCES
RNF225
RAB4A
RPL3
PRKRIP1
SELENOH
ZNF862
RUVBL1
EEFSEC
ZNF585B
ZNF383
NOXA1
FAM118A
IBA57
RACK1
PIP4P1
OSGEP
APEX1
KMT5B
RPL37
ZNF865
ZNF524
FIZ1
ZNF207
TTC33
C17orf75
SLC39A13
TSPAN10
NPLOC4
PRSS27
TRABD
TXLNA
CELF1
NOLC1
FBXO4
FBF1
HMGN2
TMEM223
TMEM179B
SMYD2
RICTOR
RHOB
NOTCH2NLA
PPP1CC
MLX
COASY
BAG2
SNAPC4
MTHFS
GPX1
ZGLP1
FDX2
ROM1
RCE1
EML3
B3GAT3
RPL6
PAXBP1
NOXO1
FNBP1
ST3GAL3
POGZ
GORAB
BNIP3
PGP
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
CLCN5
TTYH2
RPL38
CHAF1B
SLC25A42
FLYWCH1
PURA
SH3BGRL3
NDUFS7
STMP1
KAT6A
VARS2
GTF2H4
AKT3
RPL13
HIPK1
TMEM79
SMG5
FBXL3
ASXL1
SETD6
ZFAND6
LMBR1
H4C4
HDHD5
GPSM1
CARD9
PCBP2
CUL9
TRMU
PRDX2
JUNB
TOB1
TEX38
MKRN2OS
MKRN2
ATPAF1
RASA4B
TRIP6
SRRT
SSX2IP
SAMD1
CTNNAL1
C19orf67
RRM2
DNAJC21
VPS4A
TMEM250
MTF2
NKIRAS1
USP39
TMEM150A
RNF181
NOTCH2NLB
C2orf68
UFSP1
SPHK2
SPACA4
RPL18
FAM83E
ACHE
ACBD6
NPM3
FGF8
COX18
DNAJC25-GNG10
DNAJC25
TSEN54
LLGL2
CASKIN2
NCBP3
HMGN1
CPNE7
DIDO1
HNRNPF
SLC39A4
CPSF1
SLC50A1
NUB1
EFNA1
SLC39A7
RXRB
RING1
KDM3B
HSD17B8
SRCAP
LUC7L2
LOC730183
FOXD3
TMEM267
CHD1L
TP53BP2
TIGD3
NUDT16L1
SLC39A1
NOTCH2NLC
CRTC2
CREB3L4
DSTYK
RAD9A
PPP1CA
SPCS1
GLT8D1
C7orf25
EIF3L
CCDC88A
ANKRD54
ABL2
ZBTB45
PDCD6
ARF3
NPFF
NAPRT
MROH6
SLC27A5
PHF2
CSRNP2
DDX59
AGK
TYMP
SCO2
ODF3B
NUDT4B
NCOA7
SRSF4
RFX1
NDUFB2
GOLGA1
SPSB3
KMT2C
FAM207A
GTPBP3
ANO8
BHLHE40
CD320
KANSL1
TAOK2
PYCR2
DERA
NBPF1
NXF1
INTS5
GANAB
HAGHL
CCDC78
ANTKMT
THEM4
GDI1
FAM50A
ATP6AP1
CD79A
ATF3
UBA2
TRAPPC8
SOD2
BHLHA9
ACBD3
CYP2W1
COX19
GTF2H2C_2
NME4
MSH5
MPIG6B
LY6G6C
DECR2
DDAH2
CLIC1
MTRF1L
TM2D3
PDCD2
BOLA3
SCAP
PARP1
MFSD14A
TSC22D1
ACADM
SYNGR3
GFER
ERCC6L2
EAPP
H4-16
H2AJ
GPN2
BEST1
ARHGEF1
TUSC2
RASSF1
RABIF
LRRC40
STIMATE-MUSTN1
STIMATE
RSAD1
CHAD
MARCHF7
PRKAB2
P4HB
BTBD18
WDR73
STK36
RNF25
PANK3
NMB
TNKS1BP1
DIAPH1
COMMD3-BMI1
COMMD3
BMI1
TCF3
MYBL2
MLST8
CASKIN1
ARHGEF11
SLC24A1
SKIDA1
MLLT10
INTS14
DLG4
BRAF
ACADVL
ZNHIT2
TM7SF2
SLAIN1
FAU
PDE4DIP
MARCHF6
GAA
FAM20B
ZNF358
MCOLN1
CCZ1B
MTARC1
DEDD
WIZ
LBR
VANGL2
H3C10
H2BC13
H2AC13
WDR27
IREB2
DNAJB12
CDH24
C6orf120
PRRC2A
AIF1
KCTD5
VWA7
PMF1-BGLAP
PMF1
ANKFY1
TMEM109
SLC25A53
SEC61A2
RRNAD1
ISG20L2
FAM199X
CALM1
THAP11
PHIP
NUTF2
CENPT
TRIP13
TIGD1
EIF4E2
BRD9
PDPK1
FAM228B
CEMP1
THOC5
LRP6
H3C12
H2BC17
H2AC17
ARHGAP35
AP2S1
SMIM19
SLC20A2
RPEL1
NSFL1C
RNF187
HYAL2
TMSB10
ARSG
TTC5
CDK11A
TFAP4
COG2
NUCKS1
JAK1
CCDC38
AMDHD1
TGDS
GPR180
SLC25A11
RNF167
PFN1
FOXJ3
ENO3
PXK
BCKDK
SPDYE5
POM121C
FPGS
CHD8
KLHL11
THAP3
PATJ
ZBTB6
TOMM20
RC3H2
PRDX1
SMIM13
SDCCAG8
EHMT1
CEP170
ARID3B
LATS1
GMPPB
GATAD2B
EPHX1
AMIGO3
URB2
TAF5L
FAM219B
ARHGAP11A-SCG5
ARHGAP11A
VKORC1
EDEM1
URGCP
SCFD1
NCAM2
CCSAP
BAHCC1
METRN
TPTEP2-CSNK1E
RPS10-NUDT3
RPS10
SCAI
DCAF10
CCDC97
RIPK1
RAD54L2
SMN2
SMN1
SLC44A1
UNC119
TMA7
SRRM3
SP2
PIDD1
CCDC51
ATRIP
WDR48
SCN11A
NUDT4
MAP3K2
AKT2
UBE2J2
INKA2
DDX20
ZNF48
NUF2
B3GALNT2
ZER1
CACFD1
STPG3