ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728779 | THP-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◣ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

GNA15
DCAF12
CD40
RLF
UBAP1
ZNF684
IPPK
ZMPSTE24
TMCO2
CAP1
MTMR9
CMIP
MAP3K5
EXO5
DEFA1B
DEFA1
CD33
CCAR2
C8orf58
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
PRSS3
GRPEL2
ITGB2
ZFP69B
SH3BP2
RPS19
ZDHHC3
EXOSC7
LAMP1
NCF2
ALOX5AP
GLRX
ZNF696
NLRP12
SPATC1
NFYC
CAB39
NCF1
CD1C
TEAD3
IL1B
RAB24
PRELID1
NDUFS2
ADAMTS4
PGK1
B4GALT3
LGALS8
RXRA
APOA2
FCER1G
TLE3
DUX4
GPBAR1
PGA4
PGA3
CSF1R
NLRP2
PAQR8
TMEM45B
PNP
PIP4P1
CEBPD
WDFY3
AGTRAP
MTF2
ZNF408
ARHGAP1
ZFP69
SETDB1
YES1
FRG2
PPT1
HBS1L
ITLN1
LILRB5
LILRA6
FLI1
ADGB
MTPN
LUZP6
CD244
CDKN2C
PSTPIP1
FAF1
DEFA3
TP53I11
RNF149
SDCCAG8
CEP170
URM1
VASP
VPS33B
AXL
AKR1A1
SLC38A10
THEMIS2
PGA5
STEAP4
TDRD9
ATP5MPL
SNRNP200
SMAP2
PPP1R12C
TLE4
XRCC5
ARHGAP30
ZNF227
NDRG1
ACTN2
MFSD2A
IL7R
TIGD4
ARFIP1
SUN1
STK36
RNF25
ARHGEF12
MEFV
RUNX1
DENND3
TESK2
MMACHC
CCDC163
TDRD10
SHE
POMP
VCPIP1
C8orf44-SGK3
RUBCNL
FAM207A
MDM4
FOXJ3
MRPS18C
HELQ
NUDT4B
CCL3
CCL3L3
CCL3L1
EXOSC3
TRIT1
APPL2
HSPA6
CEACAM21
FCAMR
NUF2
ITGAM
TMEM30A
DUSP7
KLHL33
IPCEF1
TRPV4
F11R
UXS1
VPS13C
FEM1A
SREK1IP1
CWC27
VTA1
NMBR
CLIC5
KRT36
KRT13
AKR1C3
MMP9
SASS6
PISD
CITED4
TTC14
NUBP1
PPIH
CPLX1
ABT1
RASA1
PRR5
CXCL8
RAB3IL1
HDGF
MRPL24
SP140
SP110
C4orf3
DOCK10
CARD8
MSH6
KIF5C
GABRR2
SEC11A
MIA3
GOLGA7
LCP2
MED23
ENPP3
MXD3
TEKT2
ADPRS
CES1
HAUS6
NIBAN3
KIFAP3
SELENOH
MED18
MED10
IL16
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
OAS3
OAS2
OR52K2
MTRNR2L8
TEP1
SEMA4C
PTTG1IP
ZNF780A
CD1A
LCP1
RNPEP
PDCD2
C5AR2
ROPN1L
FCGR2B
PDF
NIP7
COG8
PPIAL4G
UBXN8
MTRNR2L2
MSH3
DHFR
UGGT1
OTUD7B
DOCK8
ARPC2
C22orf34
CTDSP1
PIKFYVE
UBL7
PALLD
KLF2
TSSC4
USF1
TSTD1
RHEX
RNASE10
UTP3
SLC12A6
NUTM1
NOP10
TCF12
KBTBD7
UBR7
GON7
ARID2
B3GALNT2
EPRS1
ZNF56
NFATC3
COL9A2
GTPBP10
LOC102724770
DGCR6
BRIX1
LYN
UCHL5
RO60
CD53
UCKL1
NCSTN
COPA
SCAF11
USP3
INPP4B
INAVA
TLR4
RPL37A
SIGLEC11
FAM167A
SIGLEC16
ID1
CTSB
ELOF1
SERPINB13
CHMP4B
PIGM
MAP2K1
IFNGR1
TNS1
HIBCH
NAIP
ZDHHC19
FCGR2A
TMEM154
TFB2M
CNST
SDHC
MPZ
DPYSL2
CCDC149
C6orf89
MTFP1
EXT1
RMND1
ARMT1
IFI16
DBI
C2orf76
NAA80
IFRD2
HYAL3
CD79A
RASSF5
TOMM34
STK4
NECAP2
IL1RN
PGBD4
EMC7
TCTE3
ERMARD
CXCL1
TUBA8
KBTBD6
EIF2D
METTL18
C1orf112
SCAMP2
ZNF622
YIF1B
KCNK6
FAM227B
DTWD1
DAP
MFN2
RPL37
CARD6
PPIAL4H
HIGD2B
BBS4
DEFA4
PA2G4
ARPC3
TNFAIP1
IFT20
DCAF10
TBPL1
FASLG
ZNF484
DENND4B
RMDN1
CPNE3
C1orf198
SUSD6
MEF2C
ATP2B4
AP1B1
CTSG
WDR70
NUP155
TMEM53
ARMH1
ADGRE1
INTS9
HMBOX1
RAPGEF1
PDXK
ARHGEF1
GPR68
TIPRL
ZNF410
TLN2
CCND3
TCTEX1D1
TMEM39B
ALDOA
NOTCH1
TRIAP1
COX6A1
DDO
NR3C1
DISC1
RGL1
ARPC5
ZP3
LRFN3
SNAPC3
CHCHD5
PDLIM2
HLA-DOA
THYN1
ACAD8
MTMR14
SCRG1
TPRKB
XRN2
TNIP1
NDFIP2
TMEM231
GPAA1
EXOSC4
FBXO38
LILRA2
NUDCD1
TATDN3
NSL1
APOL6
HM13
COL8A2
NOTCH2NLC
IPP
TMEM59
CMTR1
SBNO2
S100A8
HK3
NOL11
LAMB3
MARCO
TAF11
ANKS1A
SDHAF3
CFAP298-TCP10L
CFAP298
MAPKAPK2
SKP2
LMBRD2
DAZAP2
LYRM1
ADAM10
HMGB1
USPL1
SEPTIN9
ZNF226
GALK2
COPS2
CPNE5
TOMM20
MAP1S
AOPEP
ZMAT2
HARS2
HARS1
LILRB4
TMEM208
LRRC29
EIF3D
ITGA4
ZDHHC7
ZNF658
SLC22A16
STAU1
MRPS23
TLE1
HEXA
PRPF3
JAML
MPL
KCTD5
FCRL4
MS4A3
FKBP1A
NOTCH2
FUCA1
WDR86
DUSP6
ARHGEF10
SNRPC
TOX2
NME7
BLZF1
VIRMA
LMNA
RGS12
GPIHBP1
NSUN5
EIF2B3
RAB7B
TPT1
PHIP
PLEC
MIDEAS
P2RY12
TRIM35
PTK2B
IL6R
SRSF11
LRRC40
ATG16L1
TPM3
TOR1AIP2
TOR1AIP1
NCOA3
ERLIN2
RNGTT
OTULINL
ALG10
AK2
KIAA0895L
EXOC3L1
E2F4
ELMO3
SDHAF2
CPSF7
TMIGD3
ADORA3
PKN2
TMEM104
NAT9
PPP4R3A
ISY1-RAB43
ISY1
CBWD1
TRIB3
KIF2C
FIGNL2
DNAJC10
WNT10A
IRAK1BP1
XRRA1
SPCS2
TLE2
MRPL3
IKBKE
PRRG2
NOSIP
TBRG4
SCRN2
MRPL10
LRRC46
OSBPL7
MRPL2
KLC4
CUL7
EAPP
THOC5
DPY19L3
TATDN1
NDUFB9
CYB5R1
FCAR
SCAF1
RRAS
MAMDC2
WDR61
NMNAT1
LZIC
TFIP11
CCL22
ADORA1
JOSD2
ASPDH
TMEM33
SNX3
PPIAL4F
PPIAL4E
PPIAL4D
ZNF197
SORBS3
DCSTAMP
KLHL20
ZC3H3
LMO2
PRAM1
VASH1
ZWILCH
SNAPC5
RPL4
ATG5
SMARCA4
ZNF614
FAM200B
GGPS1
ARID4B
TACC1
NCR3
LTB
LST1
PHACTR4
PDPR
MAGEF1
BCAS1
SAMHD1
LY6G5B
GPANK1
CSNK2B
C6orf47
APOM
TRIP4
PCLAF
RTF2
SRP9
SEC22B
ARHGEF3
SSC4D
SV2A
BOLA1
STYXL1
GHRL
TREM1
ZNF221
LYPLA2
GALE
SNX19
HEATR1
TPK1
SLC8A1
PHB
TBL2
RPS2
RNF151
TBL3
NOXO1
INTS12
GSTCD
MOB4
CNGA1
BOD1L1
FBF1
MYBL1
NAT10
MAP3K7CL
CCT8
CMPK2
TTC13
NDUFS3
KBTBD4
FAM180B
DR1
RPS6KA2
PEX12
AP2B1
ZNF668
ZNF646
NDUFA12
SCML1
RTCA
OSCAR
NDUFA3
WNK4
VPS25
TPST2
GADD45B
SUCNR1
MAML2
PCM1
TOR1A
THAP9
SEC31A
ZFYVE1
DDX18
LAMTOR5
CD99
TRNP1
MTERF1
CASS4
CDKN1A
MFSD10
GPA33
MTRNR2L1
RPS20
RAB1A
ERI1
GPR88
SLC34A1
ASXL2
CHMP5
BAG1
P3H1
LRRFIP1
TMEM43
CHCHD4
HSPA13
PEX3
ADAT2
TBC1D8B
CAVIN2
TMEM222
NUS1
PBK
ZNF224
ZNF26
GTF2H2C
GTF2H2
GTF2H3
EIF2B1
DHDDS
CHMP7
SLC35F6
CMKLR1
FCGRT
MYL5
ATP5ME
STK38L
NUP133
SLC35B4
PHC2
CCDC86
A2M
POR
SNUPN
PPIE
NR1D1
PPIL4
WASHC5
NSMCE2
BID
ZNF398
ZNF425
TRIP11
PLEKHO1
CERS2
ANXA9
NCF4
CCNT2
MRPS35
DNAJC5B
CSF2RB
LRP3
ALG10B
MTIF2
ATG7
WDR55
DND1
TCHP
TMX3
CCDC102B
RPL36
MICOS13
HSD11B1L
TAGAP
TNFSF10
CIITA
RAB44
TMTC3
CEP290
MFSD4B
RPAP3
LMBR1
CBFA2T3
ZNF142
BCS1L
NEK7
BIN2
UBAP2L
C1orf43
PPP1R8
TAF1B
RGS18
LTBP2
ZNF350
DOK2
MMUT
CENPQ
ARHGAP18
ORMDL3
GSDMB
STK25
PRKCSH
CCDC151
RWDD1
SRPRA
TRAPPC8
AOAH
NECTIN4
WNT2B
CHPF2
ABCF2
ABRAXAS2
EEF1AKMT2
GTF2H2C_2
PSMD7
PIGF
CRIPT
UNK
H3-3B
TMEM127
CIAO1
WBP1
INO80B
VPS26C
ACSL3
DECR1
FPR2
FPR1
SYMPK
FOXA3
PSMD3
SCAND1
RCSD1
GNPAT
C1orf131
TRIM25
CEACAM4
IBA57
RNF139
SERPINB6
MR1
TTYH2
RPL38
SPG11
PTPN4
PPP6C
UBE4A
SEMA4B
TNPO1
MINDY3
AHI1
TERF2
PPME1
C2CD3
RBM45
PDE11A
SF3B1
ZC3H13
RPIA
RPL27A
WIPF2
SRFBP1
LARS2
PDSS2
KIZ
RAD50
RAB27B
BAZ1A
CLPP
BCL3
MRPS14
RPL5
MLKL
HMOX1
PGLYRP4
GIMAP6
S100A9
MAD2L1BP
GTPBP2
NTAN1
CAPG
EPN1
TIMM10
SMTNL1
FAM120B
TIMM21
FBXO15
ZNF697
TMEM121B
COX7A2
WDR7
UBLCP1
CCDC30
ZMYND12
PPCS
SYK
LY6E
CD5L
NOTCH2NLA
TBC1D23
GNAL
CHMP1B
MAGOH
CBWD5
LATS1
ZNF513
SNX17
EIF2B4
PRR22
DUS3L
RPL27
IFI35
GET4
ARL4A
ATP6V1C1
KPNA5
ZNF3
COPS6
FRG1
OTUD6B
MS4A7
C1orf74
PARP10
GRINA
TMEM115
NPRL2
CYB561D2
ZNF225
RPS6KB2
PTPRCAP
THEM4
CBWD3
CBWD6
PUM1
IL10RB
VIT
PHLPP1
CYB5B
NLRP3
DCANP1
TIFAB
SLC24A1
INTS14
ARID3B
SF3B5
COX16
TLN1
CREB3
ADAR
NGB
NUP42
ARHGAP42
DAGLA
FRG2C
N4BP2L2
PGS1
COX5B
PRKCB
BATF
MYCL
LPAR5
ACRBP
DCP1A
SNAP47
JMJD4
TPR
ODR4
METTL9
ANXA2R
ATP13A2
HCN3
CLK2
SLC30A5
PICALM
ETNK1
IRF8
CCDC182
CBWD2
CYRIB
RANBP3
ZNF318
WDR27
C6orf120
VSIR
SECISBP2L
MDN1
CASP8AP2
ATP1A4
SLC33A1
NKIRAS1
RPL15
GYPC
NCKAP1L
ZNF337
SESN1
CEP57L1
HIP1
NUP58
PIGBOS1
PIGB
CLASP1
PRCC
TRAK2
STRADB
CDCA8
C1orf109
CTNNB1
STK10
ICAM1
CALHM6
NCALD
OR4D9
OR4D11
AHCTF1
DCLRE1B
AP4B1
RASA3
SH2B3
IGF2R
ACSL1
NFKBIL1
DDX39B
ATP6V1G2
ETFDH
C4orf46
YTHDF2
SMARCD3
SUCLA2
ZC3HAV1
TOMM40
WDR43
FCGR3A
MCPH1
DESI2
RIC8B
TAF12
RRS1
ADHFE1
AP3S2