ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX244180 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◣ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

HIKESHI
SMPD3
FASTKD1
PHB
COX7C
NAA80
IFRD2
HYAL3
BTRC
NUDCD1
CALR3
C19orf44
ZNF749
DDX23
KBTBD6
ZNF225
ST3GAL2
TMEM115
NPRL2
CYB561D2
TMTC3
CEP290
MRI1
C19orf53
INVS
ERP44
BOD1
CTU1
PAFAH2
GSPT1
TCEA2
NUDT13
NTAN1
CALCOCO1
SLC35B4
STK25
CLPB
SV2A
BOLA1
CCDC146
ZNF189
MRPL50
SCRIB
MED15
LARS1
GPBAR1
PNKD
AAMP
PYCR3
GFUS
PANK4
HES5
ZNF513
SNX17
EIF2B4
ING4
ATP5PO
C1orf159
UBAC1
TNFAIP1
IFT20
TSNAXIP1
RANBP10
ZFYVE28
CFAP99
ZFYVE1
RPIA
TESK2
MMACHC
CCDC163
CCP110
UNKL
C16orf91
PERCC1
SYMPK
FOXA3
TTC13
TMEM208
LRRC29
AHCYL2
TTC33
KBTBD7
ODF3L2
MADCAM1
MIDN
ATP5F1D
CBARP
AP2S1
ARHGAP35
UBE2T
PPP1R12B
ZNF56
ORMDL3
GSDMB
VARS2
GTF2H4
SIRT2
NFKBIB
TTC1
PPRC1
ZNF235
SMUG1
PPP1R12C
DEXI
CLEC16A
CNIH4
WDR87
SIPA1L3
RALBP1
PEMT
CTF1
BCL7C
SNX27
GATB
TSC2
NTHL1
MAD2L1BP
GTPBP2
TRAPPC3
MAP7D1
GPR15
CLDND1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
UCKL1
ZSCAN22
BUB1B
TMEM127
CIAO1
NOP14
GRK4
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
ZFYVE19
DNAJC17
LETM1
STAU1
ZNF517
ZNF34
RPL8
BUB3
HMX2
ZNF420
ZNF169
UBR2
ZNF350
CHPF2
ABCF2
ZNF337
TIMM21
FBXO15
RPGRIP1L
FTO
VCPIP1
C8orf44-SGK3
SLC39A1
CREB3L4
CRTC2
NFXL1
RASSF1
ZMYND10
TFEB
PSMD11
TTBK1
GPKOW
ZNF384
MARS1
ARHGAP9
THRAP3
ING3
SMARCAL1
TMEM59
ZNF354A
ZNF444
RAD51AP2
NDUFS2
ADAMTS4
RTN2
CCDC174
ZNF547
TRAPPC2B
DYNC1I2
RPS2
RNF151
TBL3
NOXO1
JOSD2
ASPDH
UFSP2
C4orf47
AP2M1
AKIRIN2
SEPTIN9
PHF13
CLP1
YPEL4
DESI2
RAB5C
POLR2E
GPX4
FAM185A
ZNF32
CWC22
EMILIN1
KHK
OST4
TSSC4
SLMAP
ZNF37A
ENOX2
RAB1A
SSBP1
PRRG2
NOSIP
MON1A
RBM6
OSCAR
NDUFA3
STK17A
THYN1
ACAD8
TRAK2
STRADB
CHCHD3
DDX49
COPE
RPL36
MICOS13
HSD11B1L
LMNB2
KAT7
UBQLN4
LAMTOR2
EXOC4
CHMP4B
BANP
ASIC3
SLC4A2
CDK5
NMT1
DCAKD
RAB29
SOX6
C11orf58
SLC25A19
CNOT1
RIC8B
PEX14
DFFA
CCDC150
ZNF514
ZNF2
UTP11
FHL3
DSTYK
ZC3H11A
ZBED6
ZNF419
ZNF772
PSMD2
UNK
H3-3B
ZNF554
MXI1
PSMC4
FBXO46
MEIOSIN
SCAF1
RRAS
MYLK4
WRNIP1
PEX26
FEM1A
SERPINI1
PDCD10
MED27
HTRA2
DQX1
B3GALNT2
WNK1
HDGF
MRPL24
ZNF224
PHF12
PRR5L
COMMD9
ZNF133
FBXW11
RPL18A
PANK3
SAMD1
MISP3
C19orf67
SEC61A1
VPS50
HEPACAM2
ZNF343
ZNF527
RALGAPA2
PKLR
FDPS
AURKAIP1
FBXO48
APLF
TMEM70
ELOC
CAPN15
ZW10
CLDN25
IPPK
TMEM101
KBTBD8
SUFU
ACTR1A
SSR3
NCDN
KIAA0319L
RPS20
USP48
VIPAS39
AHSA1
RABAC1
TFPT
PRPF31
PSMD4
ZNF230
RANGAP1
VPS4B
GPT2
CNOT4
UBE2Q1
CHRNB2
PA2G4
KMT2B
RPS6KB2
PTPRCAP
LY6G5B
GPANK1
CSNK2B
C6orf47
APOM
GINS3
TMEM43
CHCHD4
ZNF484
USP31
WBP2
ZMYND15
MED11
CXCL16
PCM1
NDUFB5
MRPL47
ZNF585A
TMEM245
VAPA
GID4
ATPAF2
PTDSS2
ANO9
PHB2
WDPCP
MDH1
PIH1D1
ALDH16A1
SLC17A7
WAPL
UCHL5
RO60
PGBD4
EMC7
UBL7
INTS1
ZNF773
RPS13
LEMD2
DDX47
IGSF8
CCDC90B
SCAMP4
ADAT3
DCAF1
PRR14
FBRS
L3MBTL2
RETSAT
ZNF25
TOR1AIP2
TOR1AIP1
RPS26
PDE6D
COPS7B
TMEM160
PSMB4
SCAMP3
FAM189B
RPS3
ZNF586
PRCC
SSR2
ZNF26
C12orf43
LTA4H
ZNF599
ZNF451
ZNF140
NFKBIL1
DDX39B
ATP6V1G2
RPS7
FAM193A
SKIV2L
NELFE
CDCA8
C1orf109
CTDP1
SNX1
CIAO2A
CNOT6
METTL3
EIF1B
GFM1
BICD2
ZNF226
SYPL1
ZNF416
ZIK1
THRA
MED24
CDK5RAP2
NUP205
ZNF776
CDK8
PIGU
YPEL3
TBX6
WDR53
FBXO45
ZNF768
ZNF747
USP35
KCTD21
TXNDC9
EIF5B
ILF3
TMEM33
TIMM13
PES1
ZNF17
DNAJC28
ZNF227
GEMIN6
GPAA1
EXOSC4
DBP
CA11
RPL34
COPS7A
THAP1
PUS3
DDX25
XPOT
HSPA13
EML6
RACGAP1
DEDD
WASF1
CDC40
ZCCHC8
GABARAP
PHF23
DVL2
DNM1L
NOLC1
SEC11C
PTBP1
TMEM186
PMM2
METTL26
WFIKKN1
CARS1
RAB30
VMO1
PSMB6
GLTPD2
CLDN6
TNFRSF12A
THOC6
HCFC1R1
DYRK1B
EIF2S2
ZNF805
AURKC
NARS1
TOGARAM1
KLHL28
SDCCAG8
CEP170
MORF4L1
WBP1
INO80B
KATNB1
INTS9
HMBOX1
ITPR1
MED23
ENPP3
BET1
QTRT2
CCDC191
GSC2
PNPLA6
MAX
UBA1
DCP1A
FAM222A
WASHC3
RXFP4
KHDC4
VEZT
FGD6
CRK
SKP2
LMBRD2
TERF2
ACLY
NUF2
RBL1
RAB3C
TRAF7
RAB26
TRMT1L
SWT1
NUP153
TMEM69
GPBP1L1
SNRPE
MRPL20
CCNL2
WDR45
ZNF221
PRAF2
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
TMEM94
TXNL4B
DHX38
ZGPAT
ARFRP1
CFAP410
ABCC5
ZNF155
SUGP1
MAU2
ADSS2
CATSPERE
LRFN3
SF3A3
ZNF862
ZNF548
RAB13
RPS27
RPP40
HPS6
ARMH3
ZNF530
CCNT2
BOD1L1
MAF1
CYC1
WDR97
SYNGR4
ZMAT5
UQCR10
EMP3
CCDC114
ZNF584
GPR108
TRIP10
SEL1L
ZNF567
NOP53
BDP1
NEK8
RPL23A
RAB34
PROCA1
TLCD1
GALM
SPHK2
RPL18
FAM83E
FHIT
TSNAX
ZNF45
ZNF277
DOCK4
TMED9
B4GALT7
MITF
NKIRAS1
RPL15
OPA1
SLC50A1
DPM3
SERP1
EIF2A
SLC38A9
RAB7A
SCRT1
DGAT1
AHCTF1
TRUB1
UBALD1
MGRN1
PPP6C
CAND1
CCDC124
ZBTB7A
AQR
LUC7L
FAM234A
SUCLG1
RBL2
STRN
DPH2
B4GALT2
ATP6V0B
ZNF764
ZCCHC4
SF3B2
GAL3ST3
MEN1
MAP4K2
CCDC117
LIN37
PROSER3
HSPB6
PSENEN
UBA52
TMEM199
SEBOX
POLDIP2
DOHH
FZR1
CSRNP2
PEX12
AP2B1
CORO1A
SAP30
RPL27
IFI35
SMN2
SMN1
DARS2
CENPL
TSACC
CCT3
FBXL18
MBD1
CXXC1
CWC25
IPO7
ABRAXAS2
EEF1AKMT2
CAPG
VRK1
SH2D6
EIF3D
CNPY2
TOR2A
ZDHHC16
EXOSC1
VAMP7
POLRMT
FGF22
FAM228B
TP53I3
SF3B6
NCBP2AS2
NCBP2
RAB8B
CANT1
ZNF417
SLC25A44
DHX8
CHCHD6
IPO8
PPP1R7
PASK
HEXIM2
EMSY
COPS8
CLPP
PRKCI
CUEDC2
INTS4
IFRD1
TOR1A
ZNF691
BLOC1S5
SHPK
CTNS
ASXL1
OSBPL11
MRPS16
DNAJC9
SCYL3
FBXO38
LSG1
RRP36
MEA1
KLHDC3
FBXL19
PSMA2
MRPL32
ZSWIM9
LIG1
STMN3
RTEL1
PSMD10
ATG4A
PUM3
ZNF571
ZNF540
PRR22
DUS3L
FAM53C
CDC25C
VKORC1
PRSS53
CAPN10
NUMA1
LRTOMT
TCTEX1D4
BTBD19
TMEM79
SMG5
ZNF550
BIRC5
ZSCAN5A
SESN1
CEP57L1
ZNF304
HBP1
ZNF684
CIAO3
WDTC1
RPS3A
SETMAR
ALG10B
FBXO9
CILK1
TCOF1
TMEM109
PRPF19
SH2D3C
CDK9
REXO2
SLC37A3
RAB19
CD2BP2
ESCO2
USHBP1
BABAM1
TOMM22
PPP1R13L
POLR1G
SNIP1
DNALI1
CMPK1
THAP11
SNAPIN
CTNNBL1
DAZAP1
GAMT
GALK2
COPS2
SHLD1
ZMAT2
HARS2
HARS1
C1orf54
APH1A
ARPP19
ZNF180
LAT
SPNS1
PNISR
RBM41
TLE3
MRPL54
APBA3
RAX2
PIP5KL1
DPM2
CBR4
SZRD1
WIZ
ZNF317
S1PR4
NCLN
NAT14
ZNF605
ZNF628
TSN
ZBTB6
RC3H2
ZNF500
DPP9
FAM149B1
ECD
EIF3C
EIF3CL
ITSN1
CRYZL1
DMAC1
ZNF436
TRABD
PSMC3
HIRIP3
ZSCAN32
ZNF174
TMEM147
MVB12A
SASS6
ZNF211
TPGS1
FBF1
CCAR2
C8orf58
MUS81
CFL1
MACC1
ELP6
GGPS1
ARID4B
FAM168A
CCDC77
USP39
C2orf68
RNF181
TMEM150A
RAB1B
OAZ3
MRPL9
UBE2V1
USP15
TM9SF4
UBE2N
TOE1
MUTYH
SDF4
B3GALT6
ZNF165
OR1F12
RCAN1
TMEM222
MRPS22
PARK7
NAPB
CAMLG
TIMM22
YWHAG
DYNC2LI1
TMEM88
NAA38
CYB5D1
STX10
IER2
SNAPC3
ABLIM2
OLFML2A
NR6A1
SPEGNB
GMPPA
MTR
RGL2
PFDN6
WDR46
ADO
ETFDH
C4orf46
RAD52
HSPH1
ZNF268
CCDC142
TTC31
FCSK
ZNF774
ACP6
RPL29
RPS19
ZBTB45
SLC27A5
PSMD3
CACTIN
UFD1
CDC45
ATG4C
CCND3
EIF3F
DNAJC14
TAF8
TMEM258
FEN1
ZNF286A
DNAJC11
SUCO
SFXN5
SPC25
CEP350
SMIM13
TTLL11
AKAP8
RBBP5
NDUFS3
KBTBD4
FAM180B
N4BP2L2
ANGEL2
RPS23
ATP6AP1L
TP73
WRAP73
TMEM230
PCNA
TRMT2A
RANBP1
HSP90B1
ZNF565
ZNF146
VPS41
PRKCSH
CCDC151
IPO13
STXBP2
XAB2
PCP2
RPL12
LRSAM1
MIA3
UCK1
COG2
ZNF789
ATP5MF-PTCD1
ATP5MF
GRIN2D
R3HDM1
ZRANB3
BIVM-ERCC5
POGLUT2
BIVM
KIF15
KIAA1143
PRPF4
CDC26
ATE1
LCORL
SLC33A1
GPR137
SUPT5H
RPS16
IZUMO1
FUT1
RASIP1
FGF21
EXO1
ZC3H10
RPL41
ESYT1
PRPSAP1
YY1AP1
DAP3
CENPB
CDC25B
SPEF1
NME1-NME2
NME1
AMT
NICN1
C7orf25
KPTN
CDC34
SNRPB2
RDH14
YIPF2
TIMM29
NUTF2
CENPT