ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501657 | A-375
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◣ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

GSTA4
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
WDR74
STX5
TMEM107
EAPP
COL23A1
GBA
NUF2
FRA10AC1
DSTYK
TAF12
MTRNR2L1
PHC2
MTRNR2L8
SF3A3
MRPL21
IGHMBP2
INTS5
GANAB
POLDIP3
CCDC200
STX16
RBBP5
PTPN6
C12orf57
PARP16
H2BC21
H2AC21
H2AC20
SAR1B
S100A2
UCKL1
EIF2D
DUX4
SNAP47
JMJD4
FAM227B
DTWD1
MPZL1
SSBP1
KIF5C
HMGB1
USPL1
INTS12
GSTCD
NR1H3
ACP2
SELENOH
H4C8
S100A14
S100A16
CRTC1
ZBTB45
SLC27A5
TRIP4
PCLAF
DRG2
NDUFC2-KCTD14
NDUFC2
TATDN3
NSL1
SMG8
RPS7
CCNL1
RPL37
CARD6
H3C13
H2BC18
NPAS4
SIRT4
PYGB
TBC1D19
ZNFX1
NDUFS3
KBTBD4
FAM180B
FXYD3
PSMF1
SIT1
CCDC107
ARHGEF39
RAD54L2
PARD6B
H4C12
H4C11
H2BC14
H2AC14
EIF1AD
CST6
BANF1
DCP1A
NMNAT1
LZIC
LMNA
MTRNR2L2
MSH3
DHFR
CCDC88A
METTL9
YARS1
S100PBP
STAT3
DPY19L4
H4C6
H3C6
H1-3
SLC44A1
NOC4L
DDX51
GARS1
POLR3E
MRPS23
ZNF207
C17orf75
H2BC5
H1-4
LAMP1
SEC13
NME1-NME2
NME1
MRPS18C
HELQ
ERCC6L2
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
RUVBL1
LRRC37A3
DMAP1
COL16A1
PCID2
CUL4A
UQCC1
ADPRHL1
ETV4
RPS6
STAT1
STOML2
PIGO
FAM214B
H1-2
PRRG2
NOSIP
SRSF4
MGAT5B
JRK
GTF2H2C_2
GTF2H2C
TUBGCP3
DDIT4
H2BC15
H2AC15
MRPL40
HIRA
PTPRH
MTF2
KIF2C
H3C3
H2BC3
KLHL20
AAR2
LRRC59
PPIP5K2
GIN1
NUP54
TAF1D
C11orf54
AURKAIP1
TVP23B
SNAI1
ARTN
PTPRN2
CALHM2
CALHM1
MAT2A
CDKN2AIPNL
KMT2C
RGPD1
RGPD2
MPHOSPH10
MCEE
DYNLRB1
SNX24
ARL8B
TSC2
NTHL1
PSMD9
HPD
STX18
CLUH
TEX9
RFX7
NFE2L2
KNL1
TMEM262
VPS28
RASA3
POLG
KMT2E
TTC4
FAM187A
EFTUD2
CCDC103
H4C9
H2BC11
H2AC11
RPLP1
STAG1
GFAP
MRPL1
WDR24
STUB1
JMJD8
BSPRY
C12orf65
ELAVL3
TTLL11
SMARCD2
PSMD6
JUNB
TSFM
RARA
DHRS3
DNAJC25-GNG10
DNAJC25
SCAND1
ATP5MC2
GEMIN7
ZNF296
BNIP1
ZC3H10
RPL41
SYT7
SRSF7
DUS1L
RANBP2
NT5C
REXO4
ADAMTS13
SNRPE
GTF2H2
DDX1
MLEC
F2RL1
ST3GAL2
GINS3
LAMTOR5
RPS20
NUP153
COMMD2
NSUN4
C8orf37
GRAMD1C
MRPL34
DDA1
ABHD8
TEKT2
ADPRS
FAM98B
PAFAH2
CCAR2
C8orf58
AQR
RPS5
SDHAF3
RPS2
RNF151
TBL3
NOXO1
ZNF358
MCOLN1
G6PC3
LSM12
BANP
POLD1
NR1H2
COMMD1
CCT4
SLC33A1
MRPS14
DDX19A
ISLR
DCAF10
ADNP
PYROXD2
STN1
WBP1
INO80B
RPS19
ALG10B
TEX46
KDM1A
MRPS35
TMED2
PHF12
ESCO1
VIM
NSA2
GFM2
GTF3C3
C2orf66
RPL27
IFI35
BAX
TEFM
MAPK1IP1L
WSB2
PRRT2
MAZ
FAM133B
ZNF749
RPS3A
SPRYD4
TRMT61B
PMPCA
ENTR1
TRPM7
TIMM22
SNRPB
MRPS31
TDG
C12orf73
LDAH
CBX5
HNRNPA1
CLCN7
SNRNP70
KCNMA1
WDR36
SFPQ
ABCC3
UCHL5
RO60
TMEM222
BRF2
RAB5IF
AP3S2
NFX1
H4C3
H1-6
PSMC2
DNAJC2
MED4
TESC
RCAN1
CIAO3
MRPL55
EIF1
PTGES2
RPL12
LRSAM1
MORF4L1
USP30
MTIF2
ZNF398
ZNF425
ADAR
EFCAB2
NCOA7
PHLDA1
ITPKC
COQ8B
UTP3
ILF3
VIRMA
H2BC12
H2AC12
ERCC1
GTF3C5
ACYP2
OMA1
DAB1
RPL29
TOR1A
MED18
PPP1R14B
LOC114841035
FKBP2
PLCB3
FZD1
MRPL58
EMC3
PPRC1
MRPL20
CCNL2
PURB
TOB2
ID1
NPR1
ILF2
FCGR3A
CKAP2
VPS36
FURIN
AARS2
GPRC5A
HEXIM2
FAM207A
BMS1
BRMS1
RIN1
H4C2
H4C1
H3C2
H2AC4
H3C1
H1-1
CZIB
RPL22
RNF207
CDK5RAP1
C8orf33
NOTCH2NLC
COX16
NOL11
POLR2J
ATXN2L
MRPS2
C9orf116
TMEM101
FAM228B
TP53I3
SF3B6
TACO1
INO80C
BHLHE40
PDE6A
TTI2
ZER1
TMEM167B
BCL3
RPL26L1
GTF2B
VMAC
NDUFA11
OTUD7B
PLEKHB1
CAPS
PPP4R2
YIPF2
TIMM29
PRPF4
CDC26
ZC3H6
AP5S1
ZNF581
ZNF580
VPS72
PIP5K1A
MBTPS2
HSPA6
FBN3
SAMD1
MISP3
C19orf67
UBA52
ZC3HC1
CCDC59
ZNF3
COPS6
CCDC15
H4C7
H3C7
MAP2K3
S1PR2
UBL7
KCTD5
RRP15
P2RY11
PNPT1
DPP8
EIF3G
TMEM39B
CCNT1
SYT5
TBC1D13
HIPK1
RPS15A
ATAD2B
PHB2
RPTOR
CTNNB1
DCAF8
HROB
PANK4
HES5
MAF1
CYC1
WDR97
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
NFKB2
IDH3B
LIG4
ABHD13
GPN1
CCDC121
SNRPD1
EPHB4
UQCC3
LBHD1
MRPL27
EME1
NANOS3
CSKMT
C11orf98
GSN
FAF2
UBA2
PRMT5
MBNL2
TOR2A
WDTC1
DUS2
DPEP2NB
DDX28
EMC4
CRB1
PRDX1
RASA1
MYL5
ATP5ME
PAQR5
ANGPTL4
EIF2B5
ARID3B
SEC22B
RPGR
TMA16
SLC39A4
CPSF1
MLLT11
TMEM250
ALDOA
TBL1X
NFYC
ARL6IP1
PARP2
CCNB1IP1
YWHAE
PECAM1
TMEM238
TMEM190
RPL28
CDC42SE1
TRAF7
RAB26
PRR5L
COMMD9
ZNF789
ATP5MF-PTCD1
ATP5MF
ZMPSTE24
WDR70
NUP155
MACC1
TBPL1
MAN2C1
SMG7
H3C10
H2BC13
H2AC13
PLIN3
H2BC4
H2AC6
DGKD
MRI1
C19orf53
OAZ3
MRPL9
EIF2B3
SOS1
ADAM22
ZFAND2A
TAS1R1
NOL9
NBPF1
POU2F1
CLUAP1
FCHSD2
C16orf90
RIPOR3
RAB13
RPS27
TPD52L2
ABHD16B
ITGB3BP
EFCAB7
RRP9
PARP3
BICD1
SIRPD
BTRC
OPA1
DPP9
SNRPB2
LRWD1
ALKBH4
HEXA
H2BC17
H2AC17
H3C12
S100A10
H3-2
NTSR1
MTR
MRPL3
DRAP1
C11orf68
RPS24
POLR3A
RRAD
CIAO2B
CES2
BIRC2
NID1
SHMT1
SV2A
RNASEH2C
KAT5
RAD52
CD2BP2
MTMR11
SF3B4
SRCAP
LOC730183
TRIB1
RPL5
SAAL1
ARID1A
MALL
TSNAX
MIA3
TMEM230
PCNA
RFXANK
BORCS8
YTHDF2
TCF12
BCAT2
ACBD3
TNFRSF10B
MYH7B
GSS
INPP4B
FRMD4A
PRRT3
SH3TC2
OSCAR
NDUFA3
SUPT5H
RPS16
EPRS1
H3C4
ZBTB40
H2AC7
H4C5
H2BC7
HSD17B12
TCF7L2
CORO2B
CALR3
C19orf44
PARK7
ATF6
IQCH
AAGAB
RBM45
PDE11A
PCIF1
TAF5
ZNF106
SNAP23
CSRP1
IQSEC3
SYT8
PHLDB2
POLR2J3
SART1
HEATR1
RPL26
KRBA2
NACA
NAA20
DCLRE1B
AP4B1
DNAJB1
R3HDM2
INHBC
HPCAL1
C5orf15
TAF6
MBLAC1
CNPY4
CPT2
SLC20A1
TECR
TGFA
RPS3
BOD1L1
CNPY2
TMEM79
SMG5
ZNF286A
USE1
TMEM259
CNN2
FAM3C
TPCN1
IQCD
OCIAD1
PDS5A
GALK2
FAM53C
CDC25C
COPS2
PUM3
NDUFAF5
ESF1
POLR3B
PPP6R1
SYCE2
NAA80
IFRD2
HYAL3
ZNF513
SNX17
EIF2B4
NUP107
MTOR
GATAD2B
ETV3
PRKAR1B
CDK12
MED1
FAM200B
NBPF15
CRTAM
H2AX
DPAGT1
RBSN
UBE2H
GOLGA1
THEM4
PBRM1
GNL3
HOOK2
BUD13
YTHDF1
TGDS
GPR180
SRA1
SLC35A4
APBB3
HMBS
QTRT1
EIF4EBP3
CEP135
SEMA3B
LSMEM2
MRPL24
NDUFS7
MDM4
SRFBP1
C16orf86
PARD6A
ACD
STYXL1
ASB6
ZCWPW2
AZI2
LCMT2
ADAL
TNFRSF1A
CAAP1
BLOC1S6
POLM
ASIC3
RBM28
NUCKS1
INPP5F
LY6E
WWTR1
PCM1
INTS4
ZNF696
TSSK6
NDUFA13
NDUFA12
ADGRG1
H4C4
H2BC6
ZSCAN30
PCARE
DOHH
NARS1
FZR1
ACBD5
SNX19
PSMA1
ARHGAP19
NUP133
NCOA5
SQSTM1
CUTC
COX15
PUSL1
ACAP3
GPR25
ITGB3
PSCA
CD22
DHX8
DIAPH1
AP1G1
LARS2
PGP
SNF8
SECISBP2L
E4F1
UBE2D3
SACM1L
BIN3
KLF9
RABGAP1L
FOSL1
SH2B3
CISD2
FCRLA
CALR
FARSA
SMN2
SMN1
CCDC124
UTP25
WDR11
ULK4
IRF2BP2
DUSP7
HAUS5
ENO1
CFAP45
SPHK2
RPL18
FAM83E
KRR1
USF1
TSTD1
MAGOH
SLC3A2
TRIAP1
COX6A1
TPK1
H3C8
H2BC10
B4GALNT3
AVPI1
CWC25
MITD1
ARHGEF12
TBC1D23
TTC17
CDC73
RNF166
CTU2
TAMM41
NDUFAF3
IMPDH2
DALRD3
TEDC1
YAE1
PKMYT1
PEMT
ZNF721
PIGG
RPL6
PTPN11
MAP1LC3B
FBXO31
POLR2C
C1orf74
MAPK8IP3
PHAX
ALDH7A1
IREB2
COMMD4
ETS1
AMACR
SSH1
ALDH1A3
ZCCHC4
SLC30A6
MFSD12
HMG20B
COPS7A
SLC39A3
ZNF668
ZNF646
TBRG4
GTF2H3
EIF2B1
BORCS7
POR
SRSF2
MFSD11
MSL2
GGCX
NOL12
SEC11A
PKM
SLTM
COA7
LGALS1
PDS5B
TOR1AIP2
TOR1AIP1
TTC1
PEX12
AP2B1
PSMD3
HSPA9
STX4
AGAP3
TMUB1
FASTK
EXOSC6
NUP42
INAVA
FLOT2
DHRS13
VAMP1
INKA2
DDX20
CLDN4
IL37
PTBP1
TSN
NSFL1C
ESYT1
SSNA1
ANAPC2
DIDO1
GID8
POLR2M
MUL1
NOC3L
DDX59
HSPA8
B3GNT7
CLDN20
ING4
TMEM208
LRRC29
RMND1
ARMT1
STMP1
ROM1
EML3
B3GAT3
RSRP1
UNK
H3-3B
C8orf76
SLC35E2B
NOTCH2NLA
ZCWPW1
PPP1R35
MEPCE
NOL7
RARS1
VAMP4
KLHL12
ORC5
ZDHHC7
SOAT2
IGFBP6
MARCHF2
MTAP
LURAP1L
LAT
SPNS1
FBXO24
LRCH4
ZBTB11
RPL24
M6PR
KLRG1
CHD1L