ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637470 | MOLT-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◣ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

DUX4
HHIP
PEBP4
CALCOCO1
UCKL1
CDPF1
PRCC
TCEA2
BTRC
CYTH1
TSNAXIP1
RANBP10
TMEM115
NPRL2
CYB561D2
TESK2
MMACHC
CCDC163
CCDC200
PKIG
AP2S1
ARHGAP35
CCM2
CHMP4B
NUDCD1
ALDOC
NAA80
IFRD2
HYAL3
PLCL2
PHF12
KBTBD7
FEM1A
UTP3
CLPB
LOC102724770
DGCR6
HPSE
VARS2
GTF2H4
PHB
SMPD3
PPIAL4C
AHCYL2
TMEM236
CALR
FARSA
RAD23A
PCDH10
ALDH1A2
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
HDGF
MRPL24
GSPT1
ST3GAL2
ATP2C1
CALR3
C19orf44
SRPK2
BANP
ARHGAP39
NKAIN4
ATG4D
APBA2
ZNF704
ADA
WDPCP
MDH1
RHEX
STAU2
LAIR1
KBTBD6
STATH
KANSL1
CXCR4
RASSF1
ZMYND10
NFE2
HIKESHI
NRROS
INTS9
HMBOX1
TNIP3
CR2
PI16
IL33
C1orf159
RBL1
PEMT
RPL36
MICOS13
HSD11B1L
RTL3
ACADM
VCPIP1
C8orf44-SGK3
IQGAP2
NPIPA1
SLC39A1
CREB3L4
CRTC2
BOD1
C3orf86
KMT2B
STK17B
DEGS1
ZFYVE1
ASIC3
SLC4A2
CDK5
TRIB1
PPRC1
FRG2C
AGBL1
ZNF444
SHQ1
DGKA
PYM1
CHD1
TAF12
ARHGAP25
ING3
WDR74
STX5
CRYGN
NUPR2
CHCHD2
CCBE1
SCAF1
RRAS
NPIPB15
GRAP2
GPBAR1
PNKD
AAMP
INVS
ERP44
LZTFL1
SEC31B
PANK4
HES5
GFRA4
CD82
EMILIN1
KHK
OST4
CST5
NOP53
H2AZ2
ORAI2
CD1B
PPP1R16B
TMTC3
CEP290
BAIAP2
PAFAH2
ARHGEF7
DCLK3
MAD2L1BP
GTPBP2
RUBCNL
NEIL3
GLG1
VPS50
HEPACAM2
FBXL12
PARL
DDX23
CD69
GRAMD4
EAPP
SLC2A8
HEXA
ZNF331
CD1A
PPIAL4G
TLR9
NCR3
LTB
LST1
CD300A
GPD1L
PPP1R12C
MND1
GNA15
PVRIG
FXYD2
TOX2
NFRKB
UNK
H3-3B
KRTAP29-1
KRTAP17-1
KRTAP16-1
BHLHE23
RAB37
RHOH
DDX4
CHPF2
ABCF2
VSX1
MDM4
STX6
GSK3A
LGMN
BNIP3L
SUFU
ACTR1A
CTSH
EPHX2
ZNF225
UBR2
DSTYK
WFS1
CTU1
REPIN1
F13A1
AP2M1
KCNC2
GATB
NMT1
DCAKD
MSL2
SYNJ2
FBXO48
APLF
IL17A
YBX3
FBXL19
GSR
PSMA6
VIPAS39
AHSA1
ARL17B
ARL17A
FGR
PTPN6
C12orf57
KRT10
TTC28
CAMK4
LRP2BP
CCDC146
TPST2
RCSD1
RUFY3
ITGA6
PYCR3
GFUS
TMEM239
C20orf141
EPHA2
DEFB136
SEC14L2
FAM222A
PTPN3
TIMM21
FBXO15
ZNF337
LAMC2
BIRC5
SLC35B4
ZNF784
LEF1
STAU1
THBS4
TLR6
CXCR5
ZNF821
ZNF335
LAT
SNX9
SEPTIN9
EMP3
CCDC114
ACTA2
ABHD12B
ZNF140
KCTD9
CDCA2
LDLRAD4
THEMIS
WNK1
PARP16
TSSC4
NEK8
TRAF4
TNFAIP1
IFT20
PTP4A2
AHSP
HSPA13
CCDC137
OSER1
HGS
ARL16
PRKD2
NAPA
ITGA4
MAP1LC3B2
EGFLAM
RPGRIP1L
FTO
IL32
GZMA
PSMF1
TJP1
SLC12A6
SLC2A6
MKRN3
FMNL1
PRPF40B
NTAN1
IL23R
RIC8B
KIF2C
SYT12
WT1
FNTB
PTAFR
ATP6V0A1
STK25
LSM4
PEX14
DFFA
POLDIP3
CCL1
CCL13
TMEM70
ELOC
COL20A1
TFEB
NOL11
NBEAL2
CCDC12
ADAMTS1
USP7
SSTR3
UBE2T
PPP1R12B
PYGM
HHEX
TTI2
RGL4
TMEM101
FAM193A
MYO18B
RNF144A
TNFRSF13B
LARS1
NUF2
PROB1
SLC23A1
MZB1
SOX17
TGM6
H6PD
PLXNA4
FOXP1
RCAN1
NSMF
SLFN12
DNM1L
PTK2
SPTAN1
RHOQ
ATP6V1E2
EPAS1
STAP1
FASTKD1
BICD2
LMO2
SLC47A1
SCML4
ATP11B
TESPA1
TFPT
PRPF31
ARHGEF3
ZFYVE19
DNAJC17
MRPL1
PCNX4
NME1-NME2
NME1
UBQLN4
LAMTOR2
FBXW11
THYN1
ACAD8
SYTL2
CDT1
TAS2R50
CAPN15
TOMM34
STK4
CCP110
MMP9
LAMC1
MRPS26
GNRH2
SYMPK
FOXA3
PTCH2
JOSD2
ASPDH
N4BP2L2
ZSCAN25
CNOT6L
ZBTB45
SLC27A5
PLK1
RPL29
ATF6
ZNF500
DHX33
FAM3B
TLE3
HECTD1
D2HGDH
TPGS1
ZAP70
TMEM107
SLA
FHAD1
CRBN
OGN
TNFRSF18
TNFRSF4
BORCS7
MEIG1
RPIA
DTHD1
ARHGAP24
PHF13
PRR22
DUS3L
ZGPAT
ARFRP1
ASB2
SSBP1
PEX26
SHISA5
CCNG2
PLCG1
RIPK4
CCAR2
C8orf58
ZNF133
AVP
DESI2
VOPP1
CCDC69
ALDH3B2
SRSF10
RPS26
MX2
RFX8
VAT1
RND2
PNOC
NET1
SLC4A8
TMC8
TMC6
GALNT6
ZNF354A
TENT5C
IKZF3
IFIT3
S1PR4
NCLN
UBE3C
DOK2
XPO7
DPP6
DYNLT1
RLN1
TFAP2E
MED23
ENPP3
LIMS4
LIMS3
FAM185A
BCL9
WDR87
SIPA1L3
ATAD2
EPHA1
SOX6
C11orf58
WIPF1
FAM168A
RANGAP1
OR4D1
ZNF56
ZNF513
SNX17
EIF2B4
DHRS11
IL17RA
OSBPL5
ZNF165
OR1F12
DRC7
CAMK1
FCRLB
DNTT
NUCB2
FBXO46
MEIOSIN
SMAD2
MAPKAPK3
TNFRSF1A
DBNDD1
HRH2
ICAM2
HDAC7
PRRG2
NOSIP
RNASEH2C
KAT5
GFI1
FAM53B
CDK8
OR10T2
MAMSTR
MBNL1
ZNF736
TFAP2C
TMEM258
FEN1
ZNF354B
TTF1
CFAP77
TES
MCFD2
TTC7A
DNAJB4
CCDC90B
DYNC1I2
SIRT4
COPS4
ARHGEF12
FH
SCGB1C1
ODF3
CDKN2C
TOR4A
B9D1
MAPK7
MFAP4
ANKLE2
DPEP1
CSTA
MEN1
MAP4K2
TM9SF1
IPO4
PNLIPRP3
SLC33A1
LYST
COX7C
FAM228B
TP53I3
SF3B6
LRIG1
ATXN7
RTTN
MED15
TMEM245
ZNF605
ARID3B
PRMT2
B4GALNT4
SMG6
BRF2
PPIAL4F
PPIAL4E
PPIAL4D
CHCHD3
RALGAPA2
ORMDL3
GSDMB
PTCRA
ZNF226
ERAP1
DLC1
NSFL1C
RBM38
ADORA2A
EIF3F
LSM5
SMAD7
GP5
ZFYVE28
CFAP99
MTRNR2L1
RETNLB
FIGNL2
ANGPT2
IFNB1
ABTB2
LCK
KCNN2
ABRACL
EDEM1
WBP2
STX18
PPIAL4A
TTC13
TRAPPC3
MAP7D1
RAB1A
NUDT13
PPP1CA
TBC1D10C
CARNS1
DEK
CDK5RAP1
SERHL2
ARHGAP27
TRAF3IP3
DDAH2
CLIC1
MSH5
FNDC7
DEXI
CLEC16A
APBB1
WDR24
STUB1
JMJD8
PLAC8L1
DRAP1
C11orf68
FILIP1L
SMO
ZNF749
GGA2
TMEM163
DCP1A
FCGR2A
MAP3K8
TTC33
TMEM59
ESYT2
BUB1B
SMARCA4
SVIP
LIMS1
USP48
TMEM262
SELENOW
UBE2J1
CEP85L
PPP1R2
XCL2
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
ZC3HAV1
FMO1
SNX1
CIAO2A
SARAF
GNGT2
ABI3
LEPROTL1
MRI1
C19orf53
TAF3
CISD3
ZNF408
ARHGAP1
HIPK1
POMT1
TSC1
GFI1B
AURKAIP1
ARHGEF1
TRAT1
ZSCAN22
BUB3
GALK2
COPS2
CDK5RAP3
SELENOH
AAR2
UBC
CHSY1
TRIP4
PCLAF
EVL
MTA3
MTIF3
BCAR3
ACTN4
DHX16
PPP1R18
NRM
PANK3
ERF
SNRPD3
GUCD1
PIK3R1
STMN3
RTEL1
ASNS
NDUFB3
FAM126B
TUBA4B
TUBA4A
STK16
GLB1L
CD59
RABAC1
TLE4
GSTA4
ZNF563
BIK
SNRPB
CXXC5
TCF3
CFAP20
SAMD1
MISP3
C19orf67
CASP8
AQP3
TBC1D31
TUT1
MTA2
CCNI
IDNK
MYO1G
RB1
ARL5C
PIGU
SMARCAL1
ETV3
ZBTB46
SF3A3
MRPS18C
HELQ
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
ASXL1
TOR1AIP2
TOR1AIP1
LY6G5B
GPANK1
CSNK2B
C6orf47
APOM
PLLP
ZFYVE21
XRCC3
CALM2
MCM7
AP4M1
IFNA1
MAF1
CYC1
WDR97
THAP11
NUTF2
CENPT
GTF3C2
YIPF2
TIMM29
SWI5
GOLGA2
KIAA0408
AEBP1
USP30
TNPO3
GPR160
RASAL3
VPS37B
TSHZ3
TRAF7
RAB26
RPL18A
KAT7
KCTD5
ATP2A3
PSMD11
CCND3
TAF8
PHF19
HDAC9
FRG2
SLC35E1
MYO18A
CXorf49B
CXorf49
TM7SF3
FCGBP
SCRIB
MTMR9
ZNF101
ATP13A1
ACTRT3
PEX3
ADAT2
MTF2
TCF7
ADD3
RACGAP1
MXRA7
ZNF354C
SPON2
SLA2
ZMAT5
UQCR10
HEXIM1
SH3BP5
GPR15
CLDND1
ZW10
CLDN25
RASSF5
ARHGDIB
PPIP5K2
GIN1
COX16
TAF1C
ADAD2
TMEM127
CIAO1
BCL3
CHRNA3
CNIH3
GPKOW
HIP1
GCSAM
SLC26A11
SGSH
TGFBR1
UBAC1
ZNF169
KRR1
ETFDH
C4orf46
COL6A2
CLDN5
UNKL
C16orf91
PERCC1
GTPBP3
ANO8
ZP1
TTBK1
SUGP1
MAU2
RNF168
GRHL3
ENTHD1
SMCO1
ASPRV1
SIRT2
NFKBIB
MON1A
RBM6
NDUFS3
KBTBD4
FAM180B
HEXIM2
TMEM229B
CCDC138
GATA2
FAM184B
TMEM160
ADARB1
SYTL3
THRAP3
AQR
PEX5L
NOP14
GRK4
RBBP5
ATXN1L
LAX1
FOXN1
PTDSS2
ANO9
CHCHD1
ZSWIM8
GCNT4
ZNF224
CALCOCO2
PEAK1
HMG20A
CAVIN1
GABARAP
PHF23
DVL2
MAMDC2
HAGHL
CCDC78
ANTKMT
METRN
NAA10
ARHGAP4
RPS7
SSH2
SMARCA2
RPS20
EZR
ARHGEF2
ZNF527
CHST12
ATG9B
ABCB8
DOCK10
STAT4
NSA2
GFM2
ZNF595
VKORC1
PRSS53
REEP5
RAB27B
ZNF235
PKLR
FDPS
REXO4
ADAMTS13
CCDC150
AFF3
ZNF223
SP140L
LY6H
ALG10
MED18
UNC93B1
NT5C2
PIGZ
OR10P1
YJU2
TACO1
PLAGL1
TMEM45B
ACTR3C
HEMGN
MRPL44
CANT1
KCNQ1
HPS6
ARMH3
ACSF3
HMX2
XPC
LSM3
CTHRC1
ANXA1
MIDN
ATP5F1D
CBARP
AFF1
MYLK4
ESCO2
RTN4
SUSD3
PRDM1
PCNP
TFIP11
TRMT10C
EPB41L1
SLC32A1
APOBEC1
TMIGD1
GTSE1
CD28
SLFN12L
RBM28
SMAP2
LEFTY1
C17orf113
TRAFD1
KIF2A
ACOT7
ANKRD40
XBP1
BTN3A2
LPAR6
LRRC31
WBP1L
SMG8
SCGB1C2
RIPOR2
ZNF343