ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637467 | MOLT-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◣ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

CALCOCO1
PEBP4
NAA80
IFRD2
HYAL3
BTRC
TCEA2
ALDOC
TESK2
MMACHC
CCDC163
TMEM115
NPRL2
CYB561D2
CLPB
TSNAXIP1
RANBP10
SMPD3
AP2S1
ARHGAP35
FEM1A
VARS2
GTF2H4
UCKL1
CCM2
PRCC
CHMP4B
WDPCP
MDH1
RHEX
CALR3
C19orf44
NUDCD1
GSPT1
ZFYVE1
IL33
HDGF
MRPL24
ST3GAL2
PKIG
PPIAL4C
CDPF1
HIKESHI
PEMT
GPBAR1
PNKD
AAMP
PHB
UTP3
PLCL2
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
APBA2
CCBE1
RPL36
MICOS13
HSD11B1L
FRG2C
ZNF704
PCDH10
AHCYL2
BANP
KBTBD6
SLC39A1
CREB3L4
CRTC2
C1orf159
PPRC1
TMEM236
ALDH1A2
SLC2A8
ASIC3
SLC4A2
CDK5
ATP2C1
STATH
ZNF444
ATG4D
TOX2
PI16
CD82
RBL1
ARHGAP39
HPSE
RUBCNL
KBTBD7
LOC102724770
DGCR6
CYTH1
PAFAH2
MAD2L1BP
GTPBP2
RTL3
PPP1R16B
BOD1
EMILIN1
KHK
OST4
GLG1
AGBL1
TNIP3
NPIPA1
PHF12
TMTC3
CEP290
FBXL12
WDR74
STX5
STAU2
INTS9
HMBOX1
DUX4
SEC31B
HHIP
CST5
ING3
VCPIP1
C8orf44-SGK3
EAPP
GRAP2
IQGAP2
DCLK3
IL17A
KMT2B
NKAIN4
CALR
FARSA
RAD23A
LRP2BP
DSTYK
PANK4
HES5
SLC35B4
SHQ1
STK17B
NPIPB15
INVS
ERP44
BNIP3L
CTSH
PARL
CR2
NFE2
ARHGAP25
PPP1R12C
LAIR1
RASSF1
ZMYND10
KCNC2
BIRC5
PPIAL4G
TPST2
EMP3
CCDC114
UNK
H3-3B
SCAF1
RRAS
FBXL19
SRPK2
KCTD9
CDCA2
UBE2T
PPP1R12B
CD300A
WNK1
ACADM
NFRKB
BAIAP2
VAT1
RND2
GATB
TRIB1
NUPR2
CHCHD2
DEGS1
NTAN1
PYCR3
GFUS
CCDC200
POLDIP3
SSBP1
GNA15
KANSL1
ARHGEF7
ORAI2
TSSC4
VSX1
UBR2
LARS1
HHEX
C3orf86
RNF144A
CRYGN
FBXW11
KRTAP29-1
KRTAP17-1
KRTAP16-1
HEXA
VPS50
HEPACAM2
OR4D1
SEPTIN9
MND1
TAF12
CCDC146
ZNF331
KRT10
FBXO48
APLF
FASTKD1
PSMF1
TIMM21
FBXO15
CAPN15
ZNF225
COPS4
SLC2A6
SUFU
ACTR1A
GRAMD4
ZFYVE19
DNAJC17
NBEAL2
CCDC12
CHD1
CTU1
PARP16
WFS1
UBQLN4
LAMTOR2
NCR3
LTB
LST1
CD69
F13A1
ZNF335
VIPAS39
AHSA1
TGM6
RPS7
H2AZ2
CCP110
SYTL2
FAM222A
ADA
RANGAP1
SLC12A6
ATP11B
BUB1B
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
TESPA1
PTPN6
C12orf57
NOP53
TNFRSF13B
CCAR2
C8orf58
DGKA
PYM1
SPTAN1
SEC14L2
DDX4
TFEB
PHF13
ITGA6
GSK3A
NSFL1C
CCL1
CCL13
TNFAIP1
IFT20
RAB37
SLC9A3R1
OSER1
CXCR4
RUFY3
STAU1
EGFLAM
GFRA4
MED23
ENPP3
JOSD2
ASPDH
TTC28
LZTFL1
RIC8B
ZNF354A
GZMA
PTAFR
CXCR5
MAP1LC3B2
LSM4
FXYD2
GPKOW
TJP1
SYMPK
FOXA3
GPD1L
PEX14
DFFA
RCSD1
SOX6
C11orf58
CHPF2
ABCF2
ZNF337
ATP6V0A1
NAPA
ABHD12B
ZNF605
AHSP
TLR9
ZSCAN22
WDR24
STUB1
JMJD8
EPHX2
TFAP2C
SOX17
GSR
WT1
MDM4
CD1A
NMT1
DCAKD
COX7C
PCNX4
TMEM70
ELOC
TFPT
PRPF31
MX2
STK25
LAT
SPNS1
MSL2
DDX23
HSPA13
DYNC1I2
FAM193A
YBX3
PYGM
CAMK4
ASB2
DEXI
CLEC16A
AP2M1
PTCH2
RPGRIP1L
FTO
RPL29
SLC47A1
SIRT4
EPHA2
TFAP2E
UBE2J1
SYNJ2
PLXNA4
DCP1A
APBB1
STX6
ESYT2
LAMC2
GNGT2
ABI3
LDLRAD4
DLC1
ZNF140
RABAC1
TTI2
ZNF133
TAS2R50
SSTR3
TMEM59
NUF2
RFX8
MAP3K8
ZNF821
RIPK4
NEIL3
FMNL1
CCDC90B
CHCHD3
MRPL1
PRRG2
NOSIP
DPP6
SLC33A1
DEFB136
SYT12
ARL17B
ARL17A
PSMD11
NOS1AP
COL20A1
SPATA46
C1orf226
CNOT6L
LIMS1
ARHGAP24
CEP85L
ZSCAN25
CDT1
THEMIS
ZBTB45
SLC27A5
NDUFS7
TES
FGR
PLAAT5
NUDT13
PRKD2
H6PD
SUSD3
EPHA1
LMO2
TMEM127
CIAO1
N4BP2L2
TMEM239
C20orf141
MARS1
ARHGAP9
EPAS1
PSMA6
HEMGN
ITGA4
TPGS1
FOXP1
LYST
ZNF513
SNX17
EIF2B4
NRROS
FHAD1
ATXN7
SNX9
PNLIPRP3
PTDSS2
ANO9
DRC7
DESI2
CDK8
PEX3
ADAT2
NET1
TOR4A
SLA
TNFRSF1A
FAM185A
NDUFS3
KBTBD4
FAM180B
KCNN2
PRR22
DUS3L
RPIA
ABRACL
SLC4A8
GALNT6
MMP9
DBNDD1
PNOC
MTF2
ORMDL3
GSDMB
TNPO3
ZNF500
HECTD1
ANGPT2
MRI1
C19orf53
FNTB
THYN1
ACAD8
MRPS31
TTC13
TOMM34
STK4
AURKAIP1
TMEM245
BCAR3
TMEM107
FAM3B
AVP
ZNF784
ERAP1
FIGNL2
SMARCAL1
CCNG2
ACTA2
ALDH3B2
MCFD2
TTC7A
DTHD1
REPIN1
TTBK1
GCSAM
CCDC69
DNTT
MYO18B
RETNLB
ZNF165
OR1F12
SNAPC3
SMAD2
SHISA5
CSTA
TM9SF1
IPO4
ASXL1
BUB3
HMX2
TOR1AIP2
TOR1AIP1
ATAD2
IKZF3
SMAD7
DRAP1
C11orf68
ARHGEF12
TENT5C
USP7
CCDC138
PLK1
ABTB2
FBXO46
MEIOSIN
TRAFD1
FAM228B
TP53I3
SF3B6
FH
SELENOW
DHX33
KIF2C
AAR2
PPIAL4A
PEX26
SCGB1C1
ODF3
PTPN3
RGL4
RAB1A
TSC2
NTHL1
GP5
CDKN2C
ZNF736
LGMN
MEIG1
RCAN1
EDEM1
TSC1
GFI1B
CHST12
ZSCAN5A
NME1-NME2
NME1
PHF19
MRPL44
SNRPD3
GUCD1
PTCRA
ADD3
SERHL2
PALLD
NSMF
TNFRSF18
TNFRSF4
CDK5RAP3
LIMS4
LIMS3
CCDC150
RLN1
DHRS11
CDK5RAP1
ATXN1L
SCML4
ERF
CBFA2T3
RHOH
AFF3
TTC33
TLR6
SIRT2
NFKBIB
IDNK
FCGR2A
PVRIG
PPIAL4H
CD1B
MED15
CLDN5
ZW10
CLDN25
INTS12
GSTCD
ATF6
BORCS7
NSA2
GFM2
FCGBP
YPEL3
TBX6
TLE3
STARD10
SPC25
ZMAT5
UQCR10
BICD2
LAMC1
RASAL3
PANK3
ZNF354C
MTIF3
WDR87
SIPA1L3
FOXN1
DTX2
FAM168A
STAP1
ADAMTS1
SF3A3
CDK5RAP2
CFAP20
REXO4
ADAMTS13
CNIH3
GATA2
MON1A
RBM6
C20orf203
THBS4
IFIT3
FILIP1L
RALGAPA2
PPP1CA
TBC1D10C
RHOQ
ATP6V1E2
CARNS1
KCNA2
SCRIB
UNKL
C16orf91
PERCC1
USP48
CXorf49B
CXorf49
RB1
LCK
RAB5C
XCL2
UBAC1
ZNF56
ZCCHC8
ZNF343
AOAH
LEF1
GABARAP
PHF23
DVL2
PEAK1
HMG20A
RNF168
SMCO1
FRG2
CAMK1
HRH2
EZR
B9D1
MAPK7
MFAP4
LIG4
ABHD13
EVPL
TMEM222
AFF1
PRPF40B
S1PR4
NCLN
NEK8
TRAF4
NOP14
GRK4
TRAPPC3
MAP7D1
ZGPAT
ARFRP1
KLHL20
RBM38
MBNL1
TLE4
HDAC7
ARHGAP32
CYB561
PTP4A2
MXRA7
HIPK1
PEX5L
GGA2
PIGU
RPS20
FAM207A
FAM53B
ZNF749
TMEM160
MEN1
MAP4K2
POLD1
NR1H2
USP3
IFNB1
LETM1
NOL11
MYO1G
APOBEC1
RBBP5
RTN4
FLT1
TRIP4
PCLAF
STMN3
RTEL1
ZNF595
CCNI
DPEP1
MYLK4
DPY19L4
TMC8
TMC6
AQP3
PLLP
USP30
PTK2
ATL2
CISD3
LRIG1
TAF1C
ADAD2
EPSTI1
THRAP3
B4GALNT4
WDR36
ZNF207
C17orf75
PNPLA6
CWC22
ZNF354B
ETV3
ICAM2
EHF
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
WBP2
RASSF5
GTF3C2
PRKCI
NIBAN3
BRF2
ARHGEF3
REEP5
ZNF563
GCNT1
ZFYVE28
CFAP99
CAPG
WNK4
VPS25
PPIAL4F
PPIAL4E
PPIAL4D
RPL18A
BCL3
SYNGR4
GPR15
CLDND1
D2HGDH
PDE6D
COPS7B
ZNF101
ATP13A1
VOPP1
KIF2A
TMEM262
THAP11
NUTF2
CENPT
H4C12
H4C11
H2BC15
H2AC15
PIK3R1
GALK2
COPS2
CCDC137
HGS
ARL16
PLCG1
RAB27B
ZNF169
ZSWIM9
LIG1
PRDM1
CASS4
MTRNR2L1
RBM28
PRMT2
BHLHE23
TRAT1
LSM5
ZC3HAV1
FLI1
COMMD2
UNC93B1
ARHGAP27
ZNF230
RPS13
MAPKAPK3
CNOT4
ZNF408
ARHGAP1
ACSF3
OR10T2
MITD1
SUPT7L
SLC4A1AP
IL32
JRK
MAMSTR
EIF3F
TCF3
TMEM258
FEN1
TACO1
MRPS26
GNRH2
CHSY1
ACTR3C
OGN
UBE3C
SMO
SNX1
CIAO2A
NUMA1
LRTOMT
LY6G5B
GPANK1
CSNK2B
C6orf47
APOM
SNRPB
GFI1
RPS26
CANT1
MRPL39
AGPAT3
ZNF527
KCTD5
ZNF223
NANOS3
KRT2
SV2A
BOLA1
ASAP1
ZNF570
ZNF569
ADARB1
KRR1
SDHAF3
ARID3B
PROB1
SLC23A1
MZB1
ZBTB46
ZFYVE21
XRCC3
TRAF3IP3
DYNLT1
SYTL3
RIPOR2
ERGIC1
TMEM101
BIK
TTF1
CFAP77
UBE2F
PPP1R1A
TRAF7
RAB26
ALG10
WIPF1
SWI5
GOLGA2
NUCB2
MFSD2B
ADORA2A
S100Z
SCRT1
DGAT1
PLAGL1
STAT4
PIGZ
TBC1D21
L3MBTL2
RUVBL1
CASP8
STX18
LTA4H
NFKBIZ
S100A5
S100A4
S100A6
S100A3
ALG10B
SAR1B
TBC1D19
RECQL4
LRRC14
MFSD3
GPT
CD47
AEBP1
TMEM163
CLTC
SH3BP5
C12orf43
ATP5PO
RPL23A
RAB34
PROCA1
TLCD1
ARL5C
AGK
CPPED1
BTN3A2
GCNT4
NOP16
HIGD2A
ITGB3BP
EFCAB7
OSBPL5
KIAA0408
ZAP70
PA2G4
HPS6
ARMH3
MLEC
HIP1
CLMP
TOX
GTF3C3
C2orf66
ANKLE2
SLC35E1
FAM163B
YJU2
ACTN4
CXXC5
CD34
IL17RA
SEL1L
TRIM47
ZMPSTE24
TMCO2
ZCCHC4
ZNF226
RGL2
PFDN6
WDR46
ADGRE1
IL23R
ARHGEF1
MRPS18C
HELQ
SIT1
GTPBP3
ANO8
MTX3
LAT2
AKIRIN2
YIPF2
TIMM29
FBLN2
COX16
DEK
CACNA2D4
TOP3B
GPR160
NCOR2