ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4023329 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◣ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

HIBADH
SPATC1L
SESN1
FBH1
ANKRD16
PKNOX1
SP2
KDM4B
ACAP2
DNM2
RFX1
ZNF687
ZSWIM3
ACOT8
PLAG1
CHCHD7
TMEM60
PHTF2
MAF1
CYC1
WDR97
FRMD5
RAB5B
PMEL
CDK2
MRTFA
UBE2J2
NLK
ZBTB32
GTPBP6
GOLGA6L4
SLC19A1
SHC1
FLAD1
CKS1B
TRAF2
CYTH2
ANKHD1-EIF4EBP3
ANKHD1
DCAF7
EVI5L
HIP1
G3BP1
JUP
GOLGA6L10
KAT6B
AK2
ZNF718
BAZ2A
ATP5F1B
TLE3
OGDH
SP1
PANK2
CIC
AKTIP
CBX5
HNRNPA1
OSBPL2
H2AZ2
STT3A
ZNF141
ABHD2
SUFU
ACTR1A
CGGBP1
ZNF654
GATAD2A
ZMYM5
ZNF595
RBM27
FBXO24
LRCH4
CEP131
C7orf50
OSBP
PXMP4
ATG9A
ANKZF1
SLC25A25
NAIF1
TOP1MT
RHPN1
PPP1R36
HSPA2
ZMYM2
RAB11B
STIP1
MPZL1
TMEM160
TNIP1
ZSWIM4
MSANTD4
PPIA
CTTNBP2NL
CD68
EIF4A1
DCTN4
SLC26A2
NFATC2IP
BCL2L1
NFE2L1
TDRKH
NCOA2
PABPN1
DUX4
WFS1
HTT
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
XPO1
FAM126A
FKBP5
ELMO2
CCDC137
PDE6G
KHSRP
RPLP0
GCN1
CENPA
GDI2
SPRYD3
TMEM218
SLC25A42
RAB40C
SFXN5
MEAK7
TMEM45A
ETV5
HLTF
SCAI
PWWP2A
HBP1
YPEL2
RPL36AL
MGAT2
MED30
PRRC2B
PLCL1
FRG2C
PODNL1
DCAF15
RAB5C
CDR2
RAB3A
GOLGA6L3
KIF1B
RNF34
ZFYVE21
XRCC3
CHD6
SEL1L2
MACROD2
FAM166A
STPG3
SLC34A3
TUBB4B
CDH15
TCERG1
RRBP1
SFXN3
PDZD7
EIF2AK3
SIPA1L2
ZNF564
TEPSIN
NDUFAF8
FAM222B
MLLT1
IP6K1
NUMB
PRDM11
GATAD2B
TRAFD1
ATF7-NPFF
ATF7
MYH10
CBLB
ENSA
PRC1
MAP3K3
BAIAP2
MYH9
TOM1L2
DRC3
TRAPPC6B
PNN
EFNB2
KMT5C
ZNF281
FMNL3
CANX
FRYL
ARL4A
HDGFL2
UGP2
PGAP2
FOXK2
TXNDC16
GPR137C
CYB5A
MYH14
PLIN3
ENPP5
CCDC61
HNRNPL
DOC2A
TLCD3B
C16orf92
HNRNPC
ERCC2
KIAA0513
SPATA25
NEURL2
CTSA
ZSWIM1
PCF11
EHBP1
TOP2A
TSPAN15
CRLF3
ATAD5
SAP30L
MXD4
FRG2
STK17A
TCF3
ZSCAN32
ZNF174
AKAP8
HGH1
MROH1
SP4
TRIM32
ASTN2
PLEKHH2
ERI3
CNNM2
ZNF555
KCTD7
IER5L
RPUSD3
LLGL1
DNAJB5
MAML1
MTMR12
DNAJC14
OTULINL
JAKMIP1
DAZAP2
TLE1
ACTR2
EPHA7
BCAS3
EPHB3
PODXL2
ZNF691
PHF20
ASPH
PCDHGA1
TAF7
GNAZ
SPSB3
MRPS34
EME2
ENTPD7
KIAA0232
ZNF200
TP53BP1
OSBPL3
MPRIP
MIEF2
FLII
DCAF4
MEGF9
USP20
C9orf78
LRRC56
HRAS
VIPR1
ZNF48
MYLPF
TBC1D10B
SHKBP1
TTBK2
FANCF
STPG1
NIPAL3
R3HDM1
ZRANB3
SYP
PRICKLE3
PMS1
ORMDL1
HESX1
APPL1
ABCA7
IRS2
TRIM9
DCUN1D4
RSBN1L
CEBPG
RAB40B
STARD3NL
MPHOSPH8
MEF2D
HNRNPR
STAT3
IFT27
GET4
PDPK1
CEMP1
ZC3H6
PLEKHA8
RTRAF
NUPR2
CHCHD2
RPN2
MROH8
JOSD1
GTPBP1
UVRAG
PDP2
KANSL1
RUVBL1
PPP2R5A
DAPK3
PPP3CA
NUBP1
KLF5
RPUSD1
CHTF18
HEY1
IVNS1ABP
NXT1
UBP1
SMAD2
GOLIM4
ME2
TPCN1
IQCD
MLH1
EPM2AIP1
SLC46A3
SLC25A19
NR2C2
C12orf65
EEA1
TMCC2
SRGAP1
TIAM1
LOC150051
TANGO2
ARVCF
SP3
GLRX5
RFX2
TSACC
CCT3
KMT5A
GPR158
SMIM22
ROGDI
NCK1
MEFV
FZD4
MAST4
INTS3
ZCCHC14
MRPL37
CYB5RL
FAM72C
ALKBH5
UBTD1
MMS19
DPP3
PPFIBP1
TRIM35
PTK2B
FOXO1
ZNF492
ARAF
SMARCD2
ADRM1
ZNF563
PCNX3
MAP3K11
SSBP2
KAT7
PEF1
GLCE
RPL10
GATM
SPATA5L1
EFNA3
MAFA
AGER
RNF5
AGPAT1
GAS2L3
C16orf72
SLC41A1
ZBTB7A
TRAPPC11
RWDD4
TOP2B
DMBX1
VPS35
PBX1
YWHAZ
C22orf39
GALNT18
GNA12
JPT1
PRMT1
ARRDC3
CREBRF
KCTD9
CDCA2
PC
ORC2
SIX2
IGSF9B
SRGAP2
FAM72A
AMD1
TUBB
MDC1
NUFIP2
SLC25A28
TRAF7
RAB26
PBX3
MAPK9
KDM6A
RHCE
MACO1
SEPHS2
AKAP5
CNFN
RPS24
POLR3A
JPT2
CCDC153
CIT
CAMTA1
ZBTB18
FOXN3
SPC24
DRAP1
C11orf68
SPAG7
FYN
EIF5
DIAPH3
ANP32E
ENO1
PDE6D
COPS7B
ANP32A
PLCG1
GLIS1
HNRNPAB
SSBP3
GLCCI1
HOOK1
SYPL1
NXPE3
MRPL20
CCNL2
SRP19
NF2
PADI2
SRGAP2B
FAM72D
MRPL34
DDA1
ABHD8
BBX
BAZ1B
ZNF626
SARNP
ORMDL2
RGS14
LMAN2
ITSN1
CRYZL1
HSPA5
AP5Z1
RAB39A
IL6ST
INIP
CCDC102A
ADGRG5
GOLPH3L
ZNF443
PSKH1
NRN1L
FMN1
FKBP8
WBP1
INO80B
MOGS
MAPK8IP3
ERAP1
RAPGEF2
PIM1
FICD
DDX11
TMEM53
ARMH1
SLC39A3
MARCHF3
N6AMT1
PGK1
LMTK2
ATP7B
ALG11
SEPTIN9
IVD
RPS5
PER2
RMI1
HNRNPK
OTUB2
GPR108
TRIP10
PAX9
IGSF8
EIF3L
ANKRD54
HNRNPLL
OTX1
TDP1
EFCAB11
LINC02210-CRHR1
SCAMP2
HACL1
BTD
PPM1K
ACTN1
WBP1L
RALGPS1
PCYOX1L
ZC2HC1C
ACYP1
OPA3
KLF9
KBTBD3
AASDHPPT
EIF4A2
TSEN54
LLGL2
CASKIN2
STK11
ZNF724
PPM1B
NR3C2
GPBAR1
PNKD
AAMP
ZDHHC24
ACTN3
OXSR1
PCGF2
DGCR8
PRKACA
AZIN1
DNAJC27
CCNG1
FHIT
MTOR
PITX3
GBF1
SORT1
LIN37
PROSER3
HSPB6
CNOT3
SLC4A7
PPP6R3
GFPT1
ECHS1
JARID2
ACTR1B
WDR81
TLCD2
SUN2
INAFM2
SMARCA2
PRADC1
CCT7
RAB8A
WDR74
STX5
ATP5F1E
TSKS
AP2A1
SLC39A1
CREB3L4
CRTC2
FAM111B
ITFG2
NAXD
PTPN13
HDAC11
DPY19L3
TNRC6B
PDIA6
TYW1
SBDS
BBS10
ALKBH7
PSPN
SELENOO
JAG2
RGMB
TMTC4
COQ7
NEMP1
NAB2
CFAP410
GDI1
ATP6AP1
C5orf38
IRX2
BNIP3L
GRPEL1
FAM228B
PFN4
BPGM
ZNF143
COPG2
HDAC4
GNA11
LIX1L
POLR3GL
ANKRD34A
RWDD2B
USP16
RGS9BP
ANKRD27
BUB3
HMX2
AKAP13
CTPS1
DYNLRB1
NADSYN1
DHCR7
CAND1
CIRBP
SDC2
KSR2
CBX8
MCM3
MARCHF2
HSP90AB1
MTRNR2L8
TMEM161A
ING1
CARS2
PRDM15
MIA3
PDXP
RPS11
RPL13A
RHOB
ZNF211
INPP5B
ZNF774
SLC15A4
KANSL2
SLFN5
LOC102724770
DGCR6
LCORL
MAFB
BAHCC1
CREB3L2
ECHDC3
MTFR1
YIF1A
TMEM151A
PITPNM1
TEN1
ACOX1
PSENEN
PRKD2
PRPF40A
ARL6IP6
RRAGC
HS3ST3B1
FKBP3
FANCM
RTTN
ELAVL1
NFIL3
MAF
ZNF367
NBR1
ISOC2
CEP152
RNF20
GPR84
ZBTB20
FAM174C
ECM1
POLD2
ARL17B
ARL17A
BICRA
CPT1A
TOM1
DUSP10
ZSCAN20
TPPP
RRP36
MEA1
KLHDC3
CCDC91
RBM4
ZNF823
CHPF2
ABCF2
DDX19B
AARS1
HINFP
GRK6
SETD1A
ORAI3
TTLL5
ERG28
KCNAB2
PGD
KANK3
ZNF98
ATP6AP2
F11R
NEK7
ZNF493
DROSHA
C5orf22
MAN1A1
OTUD5
AMER1
ZNF44
UBFD1
EARS2
LAMTOR1
ANAPC15
C19orf81
JTB
ZNF91
RNF13
TRIM45
KMT5B
NRXN2
ZNF418
MAMDC2
USF3
KMT2A
STX7
S100A14
S100A16
POLR2G
ZBTB3
SYCE1L
MON1B
SLF2
ZNF727
APOA2
TOMM40L
ZNF77
NSD3
LETM2
LTN1
SFPQ
PACSIN2
HMGN1
ARHGEF9
RCOR1
KDSR
RPL18A
SAMD4B
GMFG
ZNRF2
ZNF799
YJU2
SUZ12
RNF187
LOC100129484
TNRC18
RTN4
PAFAH1B2
BAMBI
MTRNR2L1
PGP
E4F1
MED7
MCM7
AP4M1
MAP11
LAMTOR4
MAD1L1
NUDT1
MRM2
TBC1D10A
COL23A1
EPB41
ZBED5
PRSS16
MAGI1
MCU
HEXIM2
TYW1B
SUOX
ZDHHC13
USP3
SNX25
CFAP97
KLHL25
RUVBL2
GYS1
SURF4
NOVA1
RFX3
ZNF775
STARD5
RHBDD1
IRS1
ZNF92
RBM15
CNTN1
MZF1
ZNF101
ATP13A1
CHD8
ASF1B
MAP2K3
PER3
RNF6
BRPF3
COL5A1
HERC3
DDX49
COPE
IL10RA
PKNOX2
HNRNPA0
ESR2
EIF1
DLGAP5
ZNF436
BBS12
PRKCI
TPRG1L
KDM4A
INPP5A
YBX1
MTHFD1
ZNF14
FAM117A
ZNF552
STARD7
SSR4
IDH3G
KANSL3
FER1L5
RSPH4A
MUC20
TMEM41A
XXYLT1
FGFR3
TRIQK
STXBP2
XAB2
PCP2
SPDYE14
SPDYE10P
NOTCH2NLC
GALNT2
FAM53C
CDC25C
ID2
TLE2
UPRT
TMEM170A
SPPL3
TMEM14A
SPRYD7
RNF139
GALNT10
LAPTM4A
ONECUT2
ANO10
PTDSS1
MTERF3
PNPLA8
DNAJB1
TECR
CREB3L3
VEZT
FGD6
DEPP1
ZNF441
WDR45
SLC35E2A
SOCS5
ELF2
ZNF726
PTMA
CDCA7L
ATP5PD
KCTD2
CASTOR2
PCYT1A
GGA1
LMNB2
SH3GL1
CHAF1A
C19orf48
TNIK
SENP5
TMEM242
MAP3K9
WWP1
H4-16
H2AJ
FAM76A
CERS6
HAUS7
POC1B-GALNT4
GALNT4
GIT2
ANKRD13A
MBIP
PCP4L1
DDX59
LRP10
UAP1
TSPAN4
POLR2L
CD151
SYT7
ZNF440
LUC7L2
UBE2C
ZIC3
PJA2
PSMB10
LCAT
CTRL
ZNF124
MGAT4A
FAM104B
ATP1A3
MRPL18
TCP1
SETD5
SH3GLB2
MIGA2
PNLDC1
ZNF680
ARHGAP39
HEATR5A
PXMP2
POLE
C1QTNF6
KIAA0895L
EXOC3L1
E2F4
SMDT1
PHETA2
NAGA
NOL3
DLL4
ZBTB25
ZBTB1
CIZ1
DNM1
CSE1L
ITGB1BP1
CPSF3
MUC1
ZNF516
OS9
NUF2
LSM4
FBXO8
CEP44
GLIPR1L2
GMNC
URB2
TAF5L
CLDN9
PAX5
ERCC1
FUT8