ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501661 | A-375
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◣ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

GSTA4
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
MTRNR2L2
MSH3
DHFR
PHC2
NUF2
KIF5C
COL23A1
MTRNR2L8
FRA10AC1
MTRNR2L1
EIF2D
DSTYK
GBA
TAF12
DUX4
DCP1A
TRIP4
PCLAF
S100A2
H1-2
TMEM107
RAD54L2
STX16
EAPP
DRG2
HMGB1
USPL1
PTPRN2
CDK5RAP1
RBBP5
TBC1D19
POLDIP3
SCAND1
CWC25
SF3A3
NDUFS3
KBTBD4
FAM180B
H4C12
H4C11
H2BC14
H2AC14
RPL37
CARD6
SMARCD2
DHX8
ANKRD35
RPS7
SAR1B
RPS2
RNF151
TBL3
NOXO1
WDR74
STX5
ATP5MC2
STX18
TMEM167B
H4C6
H3C6
H1-3
S100A14
S100A16
CTNNB1
AP3S2
NME1-NME2
NME1
SLC24A1
INTS14
TRIAP1
COX6A1
MRPS23
H2BC21
H2AC21
H2AC20
PTPRH
RCAN1
PLEKHM3
MTF2
GEMIN7
ZNF296
CCNL1
UTP3
ZBTB45
SLC27A5
SELENOH
RGPD1
RGPD2
TTC26
CRB1
NBPF1
NIBAN2
UCKL1
DMAP1
BNIP1
H3C13
H2BC18
NTSR1
SECISBP2L
STN1
PARP16
MAN2C1
MLEC
MITD1
RPS6
SERPINE2
GTF2H2C_2
GTF2H2C
GOLGA7B
SSBP1
RAB5IF
STAT3
SNX24
ERCC1
SIRT4
CCDC200
DPP9
TATDN3
NSL1
FAM3C
AURKAIP1
TUT1
MTA2
LAG3
WDR36
YWHAE
PPP6R1
YIPF2
TIMM29
LRRC37A3
H4C7
H3C7
FXYD3
LAMP1
NDUFB10
RPL3L
MYO9B
HAUS8
INTS12
GSTCD
GTF2H2
ATF6
SMG8
WWP2
NOB1
TSEN15
SLC27A1
RPL12
LRSAM1
EFCAB2
NPAS4
PSMF1
PSMD3
FOXJ3
RBM15B
MANF
TBC1D13
SNAP47
JMJD4
MDM4
POLG
H2BC5
H1-4
CD22
LY6K
RAB13
RPS27
RARS1
HPCAL1
TBL1X
ALG10B
NDUFAF1
PDCD6
H3C3
H2BC3
FCGR3A
MRPL21
IGHMBP2
RPS20
ZNF207
C17orf75
DDIT4
SH2B3
JRK
PTPN6
C12orf57
MRPL16
KBTBD6
UBQLN4
LAMTOR2
GTF3C3
C2orf66
RANBP2
KMT2C
H2BC15
H2AC15
TACO1
TMEM222
FRG1
SAMD4B
GMFG
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
TCEA2
POLD1
NR1H2
SDHAF3
CDC73
U2SURP
DEFB132
ZNFX1
FAM227B
DTWD1
NOC4L
DDX51
KNL1
DUSP7
CALHM2
CALHM1
PRR5L
COMMD9
TDRD9
ATP5MPL
SRSF4
STX1A
CALCOCO1
FAM98B
CCDC59
TEX46
KDM1A
GNAI2
COMMD2
MED23
ENPP3
LARS2
KIF2C
PMS2
AIMP2
BHLHE40
TAGLN2
WSB2
MKRN2OS
MKRN2
SSBP2
SEC13
KYAT1
ZER1
NDUFC2-KCTD14
NDUFC2
GTPBP6
CCDC90B
SLC44A1
SLC35E2B
GAPDH
SPRY4
BCAR1
KLHL12
TMEM262
NSFL1C
NUP107
NOTCH2NLC
COX5A
TSSK6
NDUFA13
TRIM65
MRPL38
EXTL1
MAPK1IP1L
METTL9
TAMM41
ZBTB37
CLUAP1
C16orf90
USP3
NDUFA12
TMED2
NKIRAS1
RPL15
RUVBL1
CDKN2AIPNL
NCBP3
SLC25A32
DCAF13
NOTCH2NLB
TSPAN10
NPLOC4
PDP2
SOCS5
CDK2AP1
TSC2
NTHL1
MTIF2
HEXIM1
TVP23B
MRPL58
ELAVL3
KRR1
AP5S1
DDX1
ANP32E
PRKCE
MED18
DCAF10
IQCH
AAGAB
USP4
IL37
PEX14
DFFA
RPS3
RPS5
WDR24
STUB1
JMJD8
DNAJC24
DCDC1
UBOX5
FASTKD5
ITPKC
COQ8B
GALK2
COPS2
AGK
SLC25A51
KANSL3
FER1L5
YWHAZ
SNRPE
TTC1
SNRPB
HEATR1
NT5C
PPRC1
INTS1
NMNAT1
LZIC
ARL14EP
PHLDA1
KDM8
PEMT
CIAO3
H3C4
UNC45B
NLE1
H2AC7
H4C5
H2BC7
SOAT2
IGFBP6
ADPRHL1
ZNF212
PCID2
CUL4A
ID1
SACM1L
NFE2L2
SEC16B
PSMD11
WASHC4
RPS28
NDUFA7
WNK4
VPS25
POMP
UQCC1
RPS6KA1
ACTN1
SLC20A1
PARD6B
STARD4
CLCA2
MOGS
MRPL53
PTEN
KLLN
MAT2A
INTS5
GANAB
PUS7
RINT1
ITFG2
H4C4
H2BC6
METTL15
KIF18A
VPS4A
TTPAL
DRD4
USP30
DPY19L4
SYT5
EPHB4
ZWILCH
SNAPC5
RPL4
H3C8
H2BC10
MRPL1
AAR2
PSMD9
HPD
CALM2
CCDC88A
R3HDM2
INHBC
H2BC8
H2AC8
NUP153
BCL3
H4C2
H4C1
H3C2
H2AC4
MBTPS2
H3C1
H1-1
SNAI1
PANK4
HES5
ZSCAN22
TOR1AIP2
TOR1AIP1
MRPL19
YARS1
S100PBP
CCDC15
ASB6
LONP2
ABCC11
EIF3E
ANXA1
MICALL1
ST3GAL2
CALR
UBL7
ZNF789
ATP5MF-PTCD1
ATP5MF
RAD23A
NSA2
GFM2
RHBDL1
RHOT2
AP5Z1
NID1
ANGPTL4
POLR2J3
PRKCSH
CCDC151
SSNA1
ANAPC2
TTC4
VTA1
NMBR
ADNP
DDX59
NREP
ZBTB40
PLEKHB1
ZC3HC1
TMEM242
COIL
UBA2
PDE8A
ARL2BP
DNMT3A
FBXO46
MEIOSIN
CCAR2
C8orf58
ZCCHC4
WIZ
ZNF696
CREBL2
H4C9
H2BC11
H2AC11
WASHC2A
H2BC12
H2AC12
BUD13
RMDN2
EEF2K
PYGB
TRMU
FBXW2
ANXA2R
CALM1
ALDOA
ANKRD63
EPHA3
SPRY2
ELAVL2
HDGF
BANP
LMNB2
TTI2
H4C3
H1-6
MRPL40
HIRA
ATXN2L
CCDC174
LZTR1
MYBL2
ELK4
PRKAG2
ZNF594
VPS33A
GORAB
SLC25A13
SNRPB2
NCOA3
GARS1
BSPRY
ARID2
CAPRIN1
SULT6B1
CEBPZOS
SLC25A45
FRMD8
PRRG2
NOSIP
TMEM199
SEBOX
POLDIP2
PPIP5K2
GIN1
PARK7
SLC35E1
ZNF3
COPS6
CHD1L
DPH7
NRF1
GOSR1
PRKAB2
SCRN2
MRPL10
LRRC46
OSBPL7
MACROH2A1
ROM1
EML3
B3GAT3
TRMO
OGT
GSN
H2BC17
H2AC17
H3C12
H3-2
PSPC1
RPL27
IFI35
STAT1
G6PC3
LSM12
TRMT61B
BBS1
GOT2
CRTC1
B3GNT7
PA2G4
SLC35E2A
TRPC4AP
FAM193B
ATR
H4C8
AP3B1
TRIM62
SIRPD
WBP1
INO80B
TIMM22
CATSPERG
SMG7
NECAP2
RPL10
GPRC5A
COL16A1
ZMPSTE24
SLC39A13
KIF15
KIAA1143
DRAP1
C11orf68
LDAH
PHAX
ALDH7A1
ECSIT
CNN1
ASB2
CSNK1G3
TCHP
MTMR2
E2F6
NUP188
DOLK
TSNAX
TEFM
PARP2
CCNB1IP1
CCDC125
BST1
TMEM101
UCHL5
RO60
KLHL20
ZSCAN25
ZNF581
ZNF580
RNF168
CDK12
MED1
ZNF106
SNAP23
POU2F1
MPG
RHBDF1
DHRS3
WWTR1
LRRC52
MRPL24
PAFAH2
PEX12
AP2B1
ZNF26
MRPS31
TRIP6
SRRT
MFAP3
FAM114A2
ERLEC1
ASB3
ZNF770
DISC1
LEKR1
EXOSC8
ALG5
CSRP1
IFNAR1
ITGA3
TMC1
CALR3
C19orf44
TMEM79
SMG5
SH2B1
TUFM
NOTCH2NLA
PDE12
TAS1R1
NOL9
CASC3
BFSP1
PRRT3
CT45A9
CT45A8
CT45A2
MRPS15
VPS72
PIP5K1A
EPRS1
POLR3E
KEAP1
EHMT1
LHX9
C1orf53
ARRDC1
PRCC
PPP6C
COG2
ZC3H10
RPL41
ESYT1
FAM149B1
ECD
SEC22B
PECAM1
AGMO
SART1
NFKB2
USE1
AP1G1
LRRC59
BCAT2
TSG101
RRP9
PARP3
EIF3H
ZNF185
CENPBD1
PSRC1
LIMA1
AMOTL1
TUBB1
USP48
GID4
ATPAF2
RPS3A
ZNF721
PIGG
LRWD1
ALKBH4
TM9SF1
IPO4
MRPS14
NME6
STK10
TNFSF14
AXL
RNF10
COQ5
FBXO38
ZNF668
ZNF646
PCBP2
SAMD10
PRPF6
CNOT2
TPT1
SRSF7
MUL1
PMF1-BGLAP
PMF1
SPATC1
NAGK
TESK1
BCAS4
KRT18
CHMP4B
DDX23
COX7C
RPL29
AQR
DR1
NOC3L
CCDC85B
FOSL1
AVPI1
ABCC3
NDUFS7
URM1
FANCD2
TPCN1
IQCD
PPID
LENG8
NANOS3
H2BC4
H2AC6
AMACR
PRDM5
IPPK
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
SASS6
TEKT2
ADPRS
COMMD1
ZNF358
MCOLN1
DDX46
FOXO3B
RUSF1
TOB1
DUSP6
ATP6V0D1
AGRP
HNRNPU
VPS37B
NPR1
ILF2
SMIM14
TFB1M
ILVBL
LRATD2
ITGB3
ZP4
SCRIB
STIP1
PRDX1
TTC32
EFNA3
PGLS
OCEL1
DPY30
HTR5A
ARTN
CCDC124
GPS2
EIF5A
TSR3
GNPTG
CBX5
BRMS1
RIN1
HNRNPA1
B4GAT1
NOTCH2
GPAM
SPRED2
H3C10
H2BC13
H2AC13
DYNLRB1
PAQR5
FRMD3
ISLR
KRT31
CARD9
GPSM1
NOL11
TOP3B
ARL8B
TRMT6
MCM8
SEC14L1
COQ9
CIAPIN1
MRPS24
PPP4R3A
RFFL
MAST2
WDR13
IL24
C1QTNF3
SMIM38
ING4
TOMM22
THOC5
STYXL1
TMEM250
SEC11A
VPS28
LDHA
RPL7
RDH10
ATRN
NFIB
FGFBP3
CLDN20
COPS4
CDKN2C
S100A13
S100A1
CHTOP
TMEM126A
PRR19
PAFAH1B3
FAF1
HSPA8
ZNF697
GPR19
PPP2R2C
FBN3
TMPRSS5
PIGU
ZGPAT
ARFRP1
MAMDC2
RAD52
ACP6
TFRC
CWF19L1
MAML3
CSRNP1
FHL2
TNFRSF6B
PNPLA6
USHBP1
BABAM1
RPTOR
STOML2
PIGO
FAM214B
ARID3B
TIGD6
HMGXB3
MPHOSPH10
MCEE
TEX261
AAAS
TOMM7
SCO1
ADPRM
TRIM46
KRTCAP2
FEM1B
STT3B
ZNF513
SNX17
EIF2B4
ZNF350
RPS6KB2
PTPRCAP
CSDE1
HSPA9
EEF1A1
MDN1
CASP8AP2
C16orf72
FAM20B
DMTF1
TNFRSF10B
KXD1
CYP2E1
DBR1
DSN1
OTOA
FAM228B
TP53I3
SF3B6
YJU2
LMNA
BMS1
ARHGEF7
ARHGEF12
PKIG
TRMT10C
GATAD2B
ALG14
SRSF10
NUCKS1
CSTF1
AURKA
MSANTD2
NCOA7
TRNAU1AP
RASA3
SERINC3
TUBG2
PLEKHH3
NPDC1
ENTPD2
SMN2
SMN1
ZNF148
NDUFAB1
ZBTB11
RPL24
DNAJB12
WASHC2C
HIPK1
ADGRG1
C11orf49
INAVA
PARN
BFAR
MRPL4
ANKRD13D
ZNF410
MNAT1
NEURL3
COPS7A
RBM28
VPS35L
TDG
C12orf73
CLUH
SURF2
SURF1
RPL7A
MED22
RAD9A
ICE2
TMEM223
TMEM179B
AGL
CA5A
CRTAM
ADORA2B
CCN5
FAM168A
CEP350
SMIM12
FAM187A
EFTUD2
CCDC103
RFC2
MRPS21
ISG20
MRFAP1
CYB561
DYNLRB2
PLK2