ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584309 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◣ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
RABL2A
PSMD1
NME6
MAPKAPK5
NUP85
LBX1
CACTIN
RWDD1
VDAC2
IPO13
TAOK3
SUDS3
HSPA9
NVL
BLCAP
NEUROG2
POLR3F
DZANK1
PSMG2
CEP76
DYNC1LI2
FAM187A
EFTUD2
CCDC103
NUP205
HADHB
HADHA
STAM
VTI1B
RPL21
LYRM4
FARS2
POLR2E
GOSR2
C19orf48
ATP5MG
FARSB
CAPRIN1
ACTR10
NCLN
ZNF503
FZD8
PES1
EXOSC5
BCKDHA
TBCK
AIMP1
SRD5A1
SEC61B
ALG2
TSNAX
ZNF576
IRGQ
REXO1
MRPS7
GGA3
UPF2
TSN
SKP1
STAM2
TTC8
DCTN1
SLC35B1
RBBP5
PAK1IP1
C6orf52
IQCG
RPL35A
DPH6
SUPV3L1
PCBP1
PI4KB
COX7A2L
PNO1
GOLGA5
VARS1
FRG2C
SART3
ISCU
ZRANB2
PDAP1
BUD31
UFM1
EIF4ENIF1
RABGGTB
ANAPC7
ICE1
PROSER1
NHLRC3
PSMD12
ANK2
XPNPEP3
ST13
HES3
RPS12
MYLK4
SELENOF
HS2ST1
NDUFA4
RPS23
ATP6AP1L
SMC2
SMPDL3A
C16orf91
FGF19
USP1
TMED1
OSGEP
APEX1
RBKS
BABAM2
HOXA4
ADK
AP3M1
TLE4
HES1
EVA1A
DBX1
APOM
BAG6
RPS27A
CLHC1
IGFBP2
DCTN3
ARID3C
MRPS5
VEZT
FGD6
SF3B3
COG4
PIN4
TRABD2B
PAF1
CDX2
BFSP1
RGS12
FAM104A
C17orf80
NEUROG3
TMEM120B
ARHGAP11A-SCG5
ARHGAP11A
ABCG2
LRATD2
BNIP3
PRDM12
UBE2I
PRRX1
ARHGAP10
NFKBIL1
DDX39B
ATP6V1G2
DUX4
TAF9
RAD17
AK6
COMMD1
CCT4
FOXP2
MEIS2
SYBU
OR6B2
NDUFA10
BICRA
SOX21
ARHGAP24
TPM1
SYNPO
RUNX1T1
MXI1
ATOH1
MRTO4
EMC1
DMRT3
RPS29
LRR1
FOXD3
TMEM14A
CCN1
MALRD1
FRG2
DSCAML1
SKIL
EIF2S3
RPL7
RDH10
PRUNE2
LRAT
CACNA1D
ERRFI1
TM9SF1
SUCLG1
PCDH11Y
PTGES2
PAX8
INSM1
HOXB3
HOXB4
SEC11C
KDM8
FGFR2
CEP41
TPST2
ID1
LMO4
PRDM13
PDHB
SEC22B
TLE1
HOXA3
TPRA1
HOXD3
OR8J1
NUTM2D
RAI14
ATOH8
SLC7A5
SPACA1
MSX1
RBBP7
METTL24
GTF3C4
DDX31
CCDC33
PDE1B
LRIG1
PDZRN3
BAIAP2
PDHX
APIP
GPR176
LRGUK
CLEC18C
ANKLE2
PMAIP1
TLE3
DTX4
TMEM107
C12orf73
GADD45GIP1
KDM2B
NEUROD1
NR2F1
WT1
HNF1A
OAZ3
MRPL9
CYP26A1
KIF26A
METTL11B
DLX4
TPO
ZFHX4
NRARP
LRIG3
MYO10
RGL1
DAPL1
SALL1
SPTBN1
FHL1
SLA
UBE2QL1
PKDCC
TRIM71
SULF1
CDH16
TLE2
HOXB1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
B3GALT5
ARHGEF28
SEMA6D
TRAF3IP2
TBX3
TMEM70
ELOC
CAMTA1
ELMOD2
CCDC200
ZNF608
NEUROG1
STK36
RNF25
LRRC10B
CDC73
KIF21B
ZFX
PANK4
HES5
CD69
LPIN1
CHMP4C
PIM1
LZTS1
DMBX1
NEK3
NEBL
SLAMF8
DAAM1
RPN1
DDX3X
ZP4
PHC2
MAB21L2
RHOB
PCBD2
CCDC198
NRXN1
POP5
GFRA3
CNTN1
ZFHX3
HOXC4
ZGPAT
ARFRP1
LHX2
PLAGL1
C10orf90
TESC
YAP1
CR1L
CATSPERG
CLDN2
WRAP53
TP53
USP17L20
USP17L22
NXPH4
HOXA2
CNPY2
SOCS3
PDE6B
CLGN
MEF2C
GORAB
FOXP1
FABP5
OCLN
KMT2A
CNN3
PLPPR1
ZNF367
TP53INP1
SOX6
MEOX1
VCAN
HHIP
MEIS3
HNRNPA2B1
CBX3
MUSTN1
ITIH4
ZNF746
TBC1D8
SALL4
TEX2
FAM222A
RBP3
CETN1
PLEKHA5
SLC39A6
NRG2
REC8
CRABP2
ALKBH5
IGFN1
RARA
SCARF1
PAM
ABLIM3
GADD45G
DHRS9
NCOR2
LMO1
SKA2
PRR11
LIN28B
SKOR1
PLCH1
PDE12
ADM
GNG12
GUCY2C
ZNF383
ENO1
ERCC1
BBS9
DUSP6
NELFA
CLEC18A
DRD2
NCCRP1
REV3L
ECM1
CSN3
PDPN
ID2
KRT20
PJA2
NPAS1
PCDH18
FAM107A
NEUROD4
LIN28A
DHX32
ARHGEF1
GSG1
FSTL1
B3GALT2
DLL4
NCOA2
RASL10B
RAN
KCNK16
PKNOX2
PGF
CDC42EP2
GATA3
JAKMIP1
MTMR7
LIX1
LIMK2
POLR1D
LNX2
CFAP221
SPCS1
GLT8D1
TTR
CDRT15L2
WDR59
RCOR1
SYDE2
GSX2
USP17L21
USP17L12
USP17L11
USP17L18
GALNTL5
CDX1
ASXL3
SLC1A3
TNFRSF19
GAD2
FOXB1
AGMO
PRRC2C
LMO3
GCSAM
VAV3
VSTM2L
ARL4C
SOST
DUSP2
GTF3A
NEDD9
PAX3
FGFR4
CFAP69
MNX1
LRP2
DLG2
IRS2
DGKZ
ARMC12
PRSS47
CCN2
TSPAN13
PHOX2B
OR5A2
SH3BP5
TBL1XR1
CPSF4L
MIDEAS
TMCC3
ADGRL2
TNP2
PRM3
PRM2
TYRO3
NBPF9
MRPL38
PEX2
IPO11
ZCCHC13
GJA3
SLC10A2
WBP1L
TMEM132C
UGT1A4
TRMT9B
PNKD
FLVCR2
KRTAP12-1
PTPRZ1
CHD8
PPP1R12B
SFTPC
BMP1
CA14
KAT6B
CLEC18B
CS
VANGL2
LOC102723360
ZBTB18
BMPR1B
EFNB1
ASPH
BCO1
GPC4
SH2B1
GFRA1
TAGLN3
HES4
SNCG
MMRN2
VASN
TCF4
PAX7
ST18
MSX2
AGPAT4
GPC6
RPS24
POLR3A
NR2F6
EPB41L5
PMFBP1
ABAT
SLC18A1
BRWD1
RCOR3
PFKM
KIAA1958
C9orf147
DICER1
FAM181A
ME2
FLRT3
TRDMT1
PIMREG
MYRIP
PCBP4
CRB2
VOPP1
DMD
CER1
CENPS-CORT
CENPS
CMTR1
SLC22A2
TAS2R8
TAS2R7
RAPGEF4
NOTCH1
CNR1
CNOT2
MECOM
PREX2
SLC25A6
RARB
LEFTY2
IGFBP6
CDCA7L
ID3
SP5
RBPJ
ARID3B
NFE2
DNAJB7
SOAT2
GATA4
MTRNR2L2
MSH3
DHFR
TRIP10
GPR108
CCNDBP1
GRSF1
KAZALD1
ARSG
SPATC1L
MTRNR2L1
MRPL34
ABHD8
HOXC5
PAX6
RASSF2
IER3
FLOT1
NDUFS7
TCF7L2
FGR
IFI16
PLEKHO2
INAFM2
HOXA1
TMPPE
MBD2
GLB1
CBX4
SH3BP2
AXDND1
RNF149
UPF3A
CITED2
LYL1
RPS10-NUDT3
RPS10
KDM6B
HUS1
DHRS3
HEXIM2
ETFBKMT
MTRNR2L8
DDA1
HSPA1B
ARID5A
SRSF11
LRRC40
NEO1
STK38
KCNAB2
JAK3
SP2
PARK7
CCPG1
C15orf65
TIGD1
EIF4E2
HNRNPD
FRAT2
RPS6KA1
SEC14L1
SMC6
GEN1
SASH3
C11orf24
MRS2
SLCO4C1
ATG16L2
HOXC6
KDM3A
GRHL3
PRDM10
UBXN10
CCDC88A
SPECC1
LYPD1
ARHGEF10L
NADK
FGFRL1
WDR6
KLF17
NBEAL2
BIN2
SNX1
CIAO2A
SKIV2L
NELFE
SIRT4
NKD1
EFHD2
OTX1
FAM110A
TMEM104
NAT9
LPCAT3
MTMR4
DIAPH1
NBPF1
EMP3
CCDC114
ZNF76
TRAF4
PLEC
USP15
SNX3
LRRN4
WNT10B
RARG
MEF2D
KMT2E
LNPEP
CABIN1
PPP1R18
RASSF5
SPG7
CDC42EP3
DENND2D
CCDC174
DIAPH3
IMPG1
LIG3
CBFA2T3
SHOX2
RSRC1
POR
ZCCHC3
ZSWIM6
NFKBIA
IQCH
AAGAB
ZNF414
ZDHHC1
CD38
INAVA
ING1
VAV1
HEBP2
TRERF1
BCL3
TUBB
RAC2
ATP23
FTL
IQGAP2
PCNA
POLR2J3
GPAA1
EXOSC4
RNASEH2B
MINDY2
OTUD7B
NTRK2
PKN2
PKM
H6PD
PPIB
RXRA
RAB11B
NDFIP2
COL23A1
MAPKAPK3
RYBP
SHB
ANKRD1
SMARCD2
SMAD3
GALNT10
PLCB2
USP3
NKIRAS1
PDE4D
ADCY7
PCTP
IFRD2
PEX14
DFFA
YTHDF2
FAM120B
HMGCS1
PRDM1
ARHGAP4
CYP51A1
LRCH4
FBXO24
CFD
MRPS24
SLC35E2B
HESX1
PXYLP1
TBRG4
ADORA2A
HIBADH
ARIH2
TXNRD1
TUBB3
NR1D2
RNF139
SH3TC1
CYCS
ZDHHC4
ZNF740
CSAD
RNF166
IGF2BP3
CNTN4
SP7
BNIP2
DYNLL1
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
LTBR
DPP9
ANKMY1
ERI3
CLIC4
NR2C1
CPT1A
KCTD6
ZBTB25
ZBTB1
AKIRIN1
IL6R
PRSS56
DTNB
TTI2
ATXN1L
SLC35E2A
CYTH4
AGO1
MYEOV
FOS
PTGES3
RBL2
HAND1
HOXB5
SRPRA
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3
FAF2
C12orf29
ZNF3
UPP1
CASC3
CALM2
ZNF341
CD164
CTTN
SLC39A13
TYROBP
ANKRD13D
TRMT6
MCM8
TBX2
RNF103-CHMP3
RMND5A
AHDC1
CSRNP1
SNAPC3
BAZ1B
SPATA25
LAPTM5
PRRC2A
AIF1
USP42
MYADM
NOTCH2NLA
UNC13D
STX18
SBNO2
CLTC
SEMA4D
PIP4P2
ARHGAP45
MAP2K1
MAD1L1
CXXC4
SYNJ2
ZNRD2
MTF2
KCNH2
FAM89B
EHBP1L1
RXRB
IL21R
PPCDC
MTCH1
DGAT2
CENPH
SLC43A3
SEH1L
DNAJB8
ZNF25
RNF125
H2BC5
H1-4
PHF19
RASGRP2
LYPD6B
ERLIN2
PEAK3
THRAP3
COX5A
MRPS31
USP17L15
NAGLU
NOTCH2NLC
MIDN
MAP1S
EIF4H
KRI1
CDKN2D
TTYH1
EPM2A
RAD50
PIKFYVE
PKNOX1
ZBTB17
KAT6A
SDE2
ARL4A
UROD
HECTD3
BHLHE40
NR1D1
HSD17B8
GPSM3
PSMD3
FBXO41
SMPD1
QPRT
ZNF595
RFESD
ADAM17
STRADA
ITPRIP
CCDC88B
KEAP1
ARHGEF38
ACOT2
RWDD2A
PGM3
FMNL1
TMEM123
CPVL
CHN2
MC1R
PRKCD
MTRF1L
WTAP
BCAT2
LSM5
AVL9
MAGEF1
GRK6
CPNE5
NUBP1
CBWD5
CBWD3
NIBAN3
SERPINB1
PRKDC
MCM4
SLC39A7
PANK2
MYCBP2
ZNF318
NTAQ1
ASNS
USPL1
HMGB1
H3C12
H2BC17
H2AC17
PEX3
IFNGR1
ADAT2
TCHP
ATAD3B
UBL7
SCMH1
DYNLT1
DONSON
VPS37C
C1orf159
HES7
SH3BGRL3
FXYD2
GPX4
NOTCH2
OR2L13
OR2AJ1
MAST2
GPATCH8
NGRN
MCU
PNRC2
SACM1L
CISH
TIGD5
EEF1D
CBWD6
BNC2
EOLA2
RER1
MORN1
ZNF436
SCAMP2
DPEP1
ARF3