ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039042 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◣ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
ZNF335
PSMD1
MAPKAPK5
DYNC1LI2
NME6
ZNF503
TAOK3
SUDS3
PSMG2
CEP76
IPO13
POLR3F
DZANK1
CACTIN
VTI1B
NVL
NUP205
NCLN
TBCK
AIMP1
HADHB
HADHA
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
RPL21
POLR2E
TSNAX
DCTN1
RWDD1
REXO1
STAM2
MRPS7
GGA3
HSPA9
ID2
FRG2C
HOXA2
VDAC2
SLC35B1
FARSB
SKP1
STAM
LYRM4
FARS2
EXOSC5
BCKDHA
GOSR2
VARS1
BBS9
MRPS5
ZNF576
IRGQ
UPF2
RARB
TSN
PAK1IP1
C6orf52
PSMD12
RPS23
ATP6AP1L
DPH6
PDE6B
ATP5MG
DAPL1
GOLGA5
CAPRIN1
EIF4ENIF1
C19orf48
IQCG
RPL35A
SEC61B
ALG2
SMC2
TTC8
PES1
RBKS
BABAM2
IGFBP6
SOAT2
BLCAP
TM9SF1
COMMD1
CCT4
COX7A2L
PI4KB
RBBP5
ACTR10
PNO1
TMED1
SUPV3L1
NDUFA4
USP1
ZRANB2
SART3
ISCU
PKDCC
RBPJ
LYPD1
FAM104A
C17orf80
ANAPC7
PDAP1
BUD31
OSGEP
APEX1
ICE1
ADK
AP3M1
SELENOF
HS2ST1
RABGGTB
DUX4
XPNPEP3
ST13
UFM1
SLC22A2
ZFHX3
FRG2
PROSER1
NHLRC3
RPS27A
CLHC1
SYBU
CLGN
CBX4
PCBP1
LTBR
SCNN1A
RPS12
PTK2B
C12orf29
ZGPAT
ARFRP1
ZNF608
LRRN4
CDC42EP3
CYP26A1
CREB5
NEO1
PTGES2
METTL24
SF3B3
COG4
PAF1
FOXP2
PXDNL
NSUN6
ARL5B
TLE2
PDE12
VANGL2
BARHL2
CITED2
APOM
BAG6
NR2F1
HMGCS2
HEXIM2
RBMS3
GATA4
GABRB2
MYRIP
CCNDBP1
HEY2
MRTO4
EMC1
SIRT4
GADD45GIP1
MBD2
OR6B2
NDUFA10
KCNIP4
EIF2S3
SCMH1
ACOT2
MTRNR2L1
RPS29
LRR1
SLC30A4
HBB
ST7
BANP
ZNF383
MSX2
DIAPH3
PDK1
ZNF746
POP5
SUCLG1
ARHGEF10L
LAMA3
HES1
CABIN1
CDC73
SEMA3E
ST18
ARHGEF38
TNK2
SKIL
NFKBIL1
DDX39B
ATP6V1G2
CCDC200
HMX2
DMBX1
BNIP3
TPM1
RPL7
RDH10
TMEM107
LAMB1
HOXC4
HOXC6
HOXA3
CACYBP
PDHX
APIP
KAT6B
MEOX1
TBX2
SEC11C
ZBTB25
ZBTB1
LIN28A
RARA
TXNRD1
ANK3
FREM2
ARHGAP11A-SCG5
ARHGAP11A
TYRO3
ZNF407
PIN4
TBC1D9
GORAB
HOXA1
OAZ3
MRPL9
FOXP1
ZFHX4
FMN1
TTI2
CDS1
PCBD2
PCDH15
SLC25A6
RPP25
SMAGP
MGP
PRUNE2
SERTAD2
CNPY2
MKRN2OS
MKRN2
GTDC1
ARAP2
CCDC33
ITGB8
SPCS1
GLT8D1
USP44
ALKBH5
TMC7
GTF3C4
DDX31
ZNF367
NDUFB3
FAM126B
FRRS1
CNR1
MET
EPM2A
SHOX2
RSRC1
CXXC4
ATOH1
TRIP10
GPR108
RPS10-NUDT3
RPS10
USP17L15
NDUFS7
SHMT2
TAF9
RAD17
AK6
RPN1
LYPD6B
ANTKMT
METRN
GFRA1
PDZRN3
NLGN1
TNFRSF19
AGO1
ZNF395
C6orf163
ETFBKMT
ABCB4
SCML4
CCDC59
KDM3A
OTUD7B
INKA2
IL20
SPAG17
RBM20
RARG
DONSON
ASXL3
MYZAP
GCOM1
HOXB1
TIGD1
EIF4E2
TMEM70
ELOC
SCAMP2
CLNK
BNIP2
ZNF341
SPIN1
GEMIN2
TMEM106B
KDM2B
SALL3
PRTG
ID1
COL23A1
KRTAP23-1
SLITRK6
DHRS3
MRPL34
ABHD8
B3GNT5
HOXA4
EIF3D
ACKR3
MEIS2
ABLIM3
SNCG
MMRN2
POGLUT3
PKIG
NDST3
DENR
ZASP
SAP25
SLC25A53
CFAP69
SCOC
STK36
RNF25
KMT2A
MAPRE1
TMPRSS11F
RPS24
POLR3A
PRDM10
LIX1
MCU
TFAP2B
REC8
RUNX1T1
SOX14
UNC93A
GGA1
ELOVL6
ATXN2
PEX14
DFFA
LMO1
ARSF
ACOT1
ITGAV
NEFH
SEPTIN2
HDLBP
REL
RNF207
IPMK
CISD1
BRWD1
OSGIN2
IGF2BP3
COX5A
KAT6A
NELFA
BCAT2
CTF1
BCL7C
RABGAP1L
SLAMF8
FGD3
SFRP2
C16orf91
SEMA6D
NXPH4
USP34
APLN
RGS8
KDM6B
SHB
ZNF827
LYPD6
STATH
ADM
KLRC3
UBE2I
TSPAN3
GJA10
CALM2
H2BC5
H1-4
IL17B
C1orf105
ABI2
ZNF385B
AP3D1
VPS33B
LOC389199
AFAP1
HUS1
ADAMTSL4
LYN
TSHZ1
EOMES
PDHB
MYADM
TCF7
PRKD1
IGFBP2
SMARCD2
SVOPL
SIGLEC15
RBBP8NL
CLDN9
DNMBP
DCTN3
ARID3C
SPATC1L
KCNK2
HAPLN1
CCDC174
ILF3
PHIP
ZNF507
CS
PDE4D
YTHDF2
MIGA1
SLC7A7
IMMP1L
ELP4
CRABP2
BICDL2
PXMP2
POLE
TSC1
GFI1B
STX19
SRSF11
LRRC40
KANSL3
FER1L5
ATXN1L
KRT18
ACY3
TRPM7
PCLO
TPRA1
TACC1
ATXN7
EBAG9
IFI16
ZBTB17
SSBP2
OTUD4
SYNJ2BP-COX16
SYNJ2BP
BEND7
CLCN3
ACYP1
ZC2HC1C
COQ5
HSPA4L
RYR2
LMO4
UFSP1
ACHE
DMAC1
DUSP9
TBX3
EIF4H
GADD45A
PDCL3
LOC100287896
LIPT2
TMTC3
CEP290
KCNC3
CCN1
USP17L20
USP17L22
MGST1
NR2C2
CBWD5
CBWD3
CBWD6
HNRNPD
ZDHHC17
ACBD6
KANK1
RILPL1
ACTR3B
CDKL2
QPRT
FAM168B
RPRM
POU2F1
DLAT
TMSB4Y
SATB2
TMPRSS12
SH2B1
HNRNPA2B1
CBX3
MTF2
UROS
BCCIP
FGD5
VEPH1
CYP51A1
PRKAG2
PDE4DIP
SLC40A1
TLE4
GTF2IRD2B
KCNH1
NEUROG1
SORBS2
TANC2
LSM8
YEATS2
IMPA1
CNN2
PRR13
MELTF
KLHL32
SELENOS
KCNS3
TMPPE
GLB1
GOLIM4
MEMO1
GPRC5A
CEP70
EML5
BCAS2
TCHP
CCNC
JAK1
FANCL
RASSF6
BAG2
KCNN2
MTMR10
RTL6
FZD8
POLR2J3
TAF1A
C2CD5
GGH
PCTP
STX18
PEX2
NCBP3
PRXL2A
NRDE2
PYDC5
ZNF3
MTMR2
MPP5
CHD7
PTGES3
SFT2D2
DIO2
CNOT10
CCDC102A
PXYLP1
UBE2V2
ZBED9
SNX3
TCF4
BIRC6
EID2
GPR37
ID3
SPECC1
SPRR2F
EPHA6
NEUROG2
PIP4K2B
ATXN7L2
RIMS1
SLC5A10
PALLD
SULF1
LOC102723360
EYA1
BAMBI
PARP4
CMSS1
USP12
FILIP1L
SLC36A4
HMGA1
PLIN2
COLEC12
FAM110A
PLEKHD1
NEK3
C6orf136
RAB11FIP2
CMTR1
ZNF384
TPCN1
TBC1D5
PLS1
RTN4IP1
QRSL1
CAPZA2
BCAP29
SULT1A1
RYBP
TTK
EFCAB2
ARHGEF5
OTOL1
USP17L21
USP17L12
USP17L11
USP17L18
PHACTR2
SPP1
IFT22
SCAP
VWA8
PELI2
LRRTM4
SBF2
RAI14
ZSCAN12
CRPPA
PPP1R13B
INPP5A
TXNDC11
CATSPERG
KMT5C
EXPH5
DRAM1
NTAN1
ARL14EP
NUTM2E
EIF5
FAM162A
CCDC58
MRPS36
PIGU
SRSF10
OR5A2
ERCC6L2
WDR11
CEP41
FDFT1
SEMA4B
RHOBTB1
PIK3R1
NR2F6
FSTL3
C15orf61
ADAMTS7
SLC48A1
NR2C1
MARCHF6
CRKL
ANKRD36C
MGST2
JMJD1C
GDF6
ATP6V0A4
NT5DC3
NEUROG3
HES3
CDX2
VEZT
FGD6
PMAIP1
ARHGAP10
ZP4
BICRA
LBX1
NEUROD1
INSM1
LEFTY2
HOXB3
CDCA7L
DLL4
PHOX2B
TMEM120B
ANKLE2
DLX4
LZTS1
PRRX1
MSX1
DUSP6
SP5
MYLK4
ANK2
FGF19
ARID3B
NFE2
DNAJB7
LRATD2
TLE3
CNTN1
RGS12
MALRD1
MTRNR2L2
MSH3
DHFR
MRPL38
DSCAML1
RBBP7
SMPDL3A
GADD45G
GRSF1
ERRFI1
KAZALD1
ARSG
KDM8
HOXB4
CR1L
PRDM12
TRABD2B
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HOXC5
PAX6
BFSP1
RASSF2
IER3
FLOT1
LPIN1
EVA1A
TCF7L2
FGR
PLEKHO2
INAFM2
DBX1
CACNA1D
SH3BP2
AXDND1
RNF149
UPF3A
METTL11B
LYL1
VOPP1
TMEM14A
PANK4
HES5
GTF3A
MTRNR2L8
TESC
DDA1
HSPA1B
ARID5A
ABCG2
TLE1
STK38
ARHGAP24
KCNAB2
JAK3
NUTM2D
SP2
PARK7
CCPG1
C15orf65
FRAT2
RPS6KA1
SEC14L1
SMC6
GEN1
SASH3
C11orf24
C12orf73
MRS2
SLCO4C1
PHC2
ATG16L2
KIF21B
HOXD3
NCOR2
GRHL3
SLC7A5
UBXN10
TBC1D8
PAX8
CCDC88A
NADK
ERCC1
NCOA2
FGFRL1
DGKZ
ENO1
PLAGL1
WDR6
KLF17
NBEAL2
BIN2
SNX1
CIAO2A
SKIV2L
NELFE
NKD1
EFHD2
OTX1
CPSF4L
TMEM104
NAT9
LPCAT3
MTMR4
REV3L
DIAPH1
NBPF1
EMP3
CCDC114
ZNF76
TRAF4
PLEC
MEF2C
CAMTA1
USP15
WNT10B
MEF2D
KMT2E
SOX21
MXI1
LNPEP
PPP1R18
RASSF5
SPG7
DENND2D
DDX3X
IMPG1
LIG3
CBFA2T3
POR
ZCCHC3
ZSWIM6
NFKBIA
IQCH
AAGAB
ZNF414
ZDHHC1
CD38
INAVA
ING1
VAV1
HEBP2
TRERF1
BCL3
TUBB
RAC2
ATP23
PNKD
CNOT2
LRIG3
FTL
IQGAP2
PCNA
SYNPO
SPACA1
GPAA1
EXOSC4
RNASEH2B
LRIG1
MINDY2
NTRK2
PKN2
PKM
CLDN2
H6PD
PPIB
PDPN
RXRA
RAB11B
NDFIP2
MAPKAPK3
CDX1
ANKRD1
SMAD3
GALNT10
PLCB2
USP3
NKIRAS1
ADCY7
IFRD2
FAM120B
HMGCS1
PRDM1
ARHGAP4
LRCH4
FBXO24
CFD
MRPS24
SLC35E2B
DLG2
HESX1
TBRG4
ADORA2A
HIBADH
ARIH2
TUBB3
NR1D2
RNF139
SH3TC1
CYCS
ZDHHC4
ZNF740
CSAD
RNF166
CNTN4
SP7
DYNLL1
MECOM
BAIAP2
SOD2
PIK3AP1
SBF1
ARID2
DPP9
ANKMY1
ERI3
CLIC4
CPT1A
KCTD6
DTX4
AKIRIN1
IL6R
PRSS56
SEC22B
KIF26A
DTNB
SLC35E2A
CYTH4
TPST2
MYEOV
FOS
LRGUK
ZFX
RBL2
HAND1
HOXB5
HNF1A
SRPRA
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3
HHIP
PCDH11Y
FAF2
ARHGEF1
ADGRL2
UPP1
CASC3
DMRT3
CD164
CTTN
SLC39A13
TYROBP
ANKRD13D
TRMT6
MCM8
RNF103-CHMP3
RMND5A