ChIP-Atlas: Target genes

Potential target genes for HOXA4

Query protein: HOXA4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXA4 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXA4's Target genes

◣ HOXA4: Average

◢ SRX359892: LoVo

◢ HOXA4: STRING

RAD51AP1
C12orf4
CLPB
KLHL12
SETD1A
MGRN1
CBX4
BRPF1
SFSWAP
PSMC3
HARBI1
ATG13
MCM3
TIMM22
CMSS1
PDE12
ARL1
MCM6
SNRNP35
PPP1R37
CDCA7
PDE4A
RAPGEF3
PDSS2
FBXO8
CEP44
ARMC8
DNM2
MCM5
HMGCS1
ARHGEF39
CCDC124
INO80
ARRDC4
MTRNR2L8
GARS1
EVI5L
RAB5B
HMGCR
NUCKS1
NHLRC2
DCLRE1A
OSGEPL1
SMARCE1
SIRT4
CCDC59
MRPS23
AGFG2
ATAD2
TPGS2
ZBTB8OS
RBBP4
E2F3
SP2
SP1
NOLC1
SREBF2
H2AZ2
EXOSC8
ALG5
MSMO1
POLR3G
MBLAC2
TPRA1
MCM2
ZNF423
H3-3B
ICAM2
CAMTA2
JUP
POC1B-GALNT4
GALNT4
H3-3A
DNMT1
RFX1
TCF19
CCHCR1
PKP2
EIF2AK3
TIMM9
KIAA0586
RFC2
MVK
RAD51
MPV17L2
RBBP5
ISG20
CDC25A
FAN1
GINS3
CCDC200
PCLAF
PPM1D
SLBP
SMPDL3A
ZCCHC4
SQLE
BLM
TTC9B
CCDC88B
ZNF367
ATF7-NPFF
ATF7
RGPD2
RGPD1
ANKHD1-EIF4EBP3
ANKHD1
AK2
NEMP1
DDAH1
CCN1
E2F2
TMEM248
PRKDC
MCM4
LRP6
PON3
FDPS
GPR84
RPA2
ABHD2
ZSWIM9
LIG1
MTRNR2L2
MSH3
DHFR
DCP1B
UNG
OSBP
ALKBH2
TARS3
CDC6
ESYT1
TRIP4
LACTB
TIMELESS
PWWP2A
MIP
CCT2
ANKRD63
CBY3
TIPIN
FNTB
LTN1
PCNA
PPP2R5A
MARCHF7
CHEK1
RECQL
GOLT1B
STAT6
SLC25A42
DPP8
ATP5F1B
NDUFB3
FAM126B
PDXDC1
CIC
FRMD6
LRCH4
FBXO24
PDS5A
NFATC2IP
HUS1
STIP1
TOM1L2
POLR3B
DRC3
H4C11
MLH1
EPM2AIP1
KLHDC10
ITFG2
CYP51A1
POLD1
COL23A1
PRICKLE3
CZIB
PGBD2
MRPS36
RASGRP2
TUBB
MDC1
WDR74
DNAJC9
RTTN
TFPT
PRPF31
CASP8AP2
TFAP4
LARP1
CENPM
VPS33A
TMEM168
SLC7A6
ZSCAN25
OS9
NUFIP2
ILF3
CCDC174
HNRNPC
H4C15
H4C14
GMNN
HNRNPA0
KHSRP
G3BP1
RIF1
SFN
TK1
RBM48
PEX1
MCM7
AP4M1
RPIA
PAQR4
KREMEN2
KCTD7
AP3M2
KDM8
USP37
CNOT9
CYCS
ENSA
PNCK
C6orf226
SMDT1
MED11
LRRC8B
E2F1
RBL1
BAZ1B
ASNS
PNPLA8
WDR76
VAMP4
MFAP1
SYNGR4
TMEM223
TMEM179B
TBC1D4
MLF2
RFWD3
RFC4
MRPL42
TMBIM6
TMED1
CDC23
DCXR
EZH2
CDC42EP4
FAM222A
PPRC1
GINS2
GALK1
MTHFD1
PRIM1
TLE3
DYNC2I1
CEP85
JOSD1
GTPBP1
MRPL53
SPAG7
SNRPF
DCTN4
POLA1
TDRKH
RSPH3
HPS5
GTF2H1
THG1L
TSFM
HMCES
CCNI
SARNP
PMF1-BGLAP
PMF1
ORMDL2
RAD54L
UBFD1
EARS2
AATF
DENND4A
DDX11
TNPO3
KDM5A
INTS7
DTL
CCDC77
AAAS
MGAT1
HDGFL2
BORCS7
TMEM167B
HERC1
PIM1
UMAD1
LMTK2
TICRR
STARD10
PLD6
NBPF1
ADK
RAB11A
PLXNC1
EIF2AK1
ATG9B
ABCB8
SNAPC5
KATNB1
KAT6B
FGFR4
CYB561D1
LMAN2
ARNTL
IFT52
SSBP1
ESYT2
SLC25A6
RBSN
WDR6
CRYM
SEC11A
H4C12
TSKS
PPFIA3
LIN7B
C19orf73
AP2A1
SRCAP
LOC730183
ASCC1
ANAPC16
TRIM56
TFCP2
ROBO3
RINT1
TMEM107
TAF12
MRPL27
EME1
ZC3H10
RPL41
ADCY4
GLIPR1L2
VPS41
LENG1
RBM28
CDON
KPNB1
ITGB3BP
H4C8
EFCAB7
MSH6
ZNF687
NLK
EIF2D
TP53BP1
TCAF1
LFNG
BATF3
UBE3B
TGOLN2
SLC25A25
POLG
NAIF1
GGNBP2
NDUFS7
POLDIP3
OGDH
CSTF2T
HNRNPL
SUPT7L
SLC4A1AP
RPL5
PHF23
NRL
METTL1
EEF1AKMT3
DVL2
DCAF11
CYP27B1
TGFB1I1
GTPBP10
ZNF77
TBC1D10B
MYLPF
DSTYK
MYBBP1A
GGT6
KNL1
FAM133B
SMIM13
NME1-NME2
NME1
YEATS4
FBXO22
C11orf96
SEPTIN2
HDLBP
NDUFA5
KPTN
BMF
VPS37A
MTMR4
CNOT7
EXOC2
B4GALNT4
TRUB2
METTL7B
COQ4
SIVA1
C12orf65
VPS13B
DKK1
CEP152
SLC39A13
PIK3R3
NUDT15
NOL12
MDM4
NUP155
SPATA24
GET4
GATAD2A
ATP5MF-PTCD1
ATP5MF
STK17A
DAZAP2
EXD1
CHP1
CCNB2
BUB1B
NAGK
SPOP
FDFT1
DDX39A
FUS
ATG101
USP30
UBE3C
TULP3
RWDD1
NDUFB2
DUS3L
USP14
FGD4
EIF2B3
RALGAPA2
MAN2C1
ATAT1
TTI2
DYNC2I2
UST
PGAM1
MVD
HNRNPUL1
SACM1L
HBP1
SNRPG
NUBP1
KNTC1
SYS1
RAB11B
P4HB
WNT3
TRMO
TAF10
S100A13
HACE1
CHTOP
ATP5MC2
SUGCT
MPLKIP
LCMT2
ADAL
PABPN1
DUT
CHMP7
CALCOCO1
CETN3
PSIP1
NCDN
KIAA0319L
GLCE
ZFYVE19
SRSF1
DNAJC17
ASF1B
RABGEF1
LTA4H
FMNL3
AP1G1
PRRC2B
TP53I3
POLR2J3
LEO1
ACTL6A
MOSPD3
LIN52
HCFC2
GLT8D2
ALDH6A1
RACGAP1
LOC100287896
LIPT2
PCCB
LARP4
GCA
FAM186A
C2CD5
INKA2
GGCT
DDX20
TMEM87A
TMEM209
SSMEM1
GANC
TFR2
RBM8A
ADAMTSL5
ZBTB3
TPM3
SWSAP1
CENPS-CORT
CENPS
C12orf66
ADSS1
TYK2
PMVK
FIS1
SYCE2
MRPL17
INAFM1
HSD17B4
MSH2
DNAJB12
CCNDBP1
ATP5MC1
MRPS28
FAM168A
KMT5C
CACNB3
IMP3
ATG5
PGAP2
ORC4
MBD5
LAMTOR4
KRBA2
AP3S2
PDE4DIP
LSR
DNAAF3
NOP53
TOP2A
STXBP3
SP8
PDIA4
VAMP1
TMEM39B
GTF2IRD2B
LARS1
H4C9
NDUFS3
KBTBD4
FUT11
SMIM10L1
PRH1-TAS2R14
MAMDC2
CHST12
SRSF7
AGBL3
RCCD1
OIP5
NUSAP1
MAP3K3
WARS2
PODNL1
MRPL44
MOB3A
IZUMO4
DCAF15
CFAP20
PAIP2
COX19
ZSCAN22
USP48
HECTD1
ARID4A
ZNF212
TOMM40
SNX15
GNL2
CANX
TMBIM4
NPIPB9
IQCH
GUK1
CLSPN
C1orf53
ANAPC5
AHCYL2
AAGAB
STEAP2
STAT2
IFT27
APOF
UBE2B
CDKL3
TMPRSS4
STMP1
RCC1
FAM126A
H4C4
H2BC6
GPN2
GBA
PRKCI
PISD
CSNK1G1
FNIP1
TMEM59
TTBK2
SRI
HSD17B7
ORC2
GLRX5
FER
USO1
SCAMP2
PAXBP1
HSPBP1
BRSK1
TMEM38A
TCAIM
SMIM7
CDCA7L
SF3A1
POLG2
LYPD5
FZD1
CEP135
CCDC157
TNFRSF12A
THOC6
HCFC1R1
MRPL45
MPV17
STAP2
MPND
TUBA1B
TARBP2
PSMD9
NFYC
MAP3K12
KIAA1958
HPD
DUSP12
C9orf147
ZFYVE21
XRCC3
ZCWPW2
VCP
DPY19L4
AZI2
SLC17A5
FDXACB1
C2orf42
C11orf1
TRDMT1
NUDCD3
H2BC8
H2AC8
FBXL18
CENPH
CASC3
USP32
INTS2
AASDH
TECR
RPS26
PRKAB1
NUF2
MTRNR2L9
LLGL2
DNAJB1
ASH2L
RNF14
PMS2
GABPB2
AIMP2
PFDN5
MYG1
MRPL48
C16orf70
SURF6
SF3B5
PRMT2
HEXIM1
TRAFD1
DIABLO
GTF2A1
SUMO1
SPATS2
SPAAR
RFC1
PYROXD2
MAP2K1
LSM5
AVL9
TTLL4
POLR2J2
NPIPB6
HACL1
GOLGA5
BTD
ZCWPW1
TNNT1
SLC36A4
MEPCE
MARCHF9
CDK5RAP3
CDK4
ZNF2
NOP16
HIGD2A
GPI
FRMD3
ALG6
TCERG1
STT3A
SETD5
PBX3
OTULIN
MYO9B
IL17RB
HSP90B1
HAUS8
FSD1L
EID1
DHRS4
CHDH
STARD3NL
LEMD3
UGGT1
TSN
MRPS15
IDI1
FBXO46
COQ10A
CAMTA1
SLC3A2
RSL24D1
MTHFD2
DOHH
ZNF740
TMEM170A
TBRG4
SNRPB2
RMI2
CYP20A1
CSAD
ALDOA
LUC7L2
FANCI
SOD2
MLKL
EIF3CL
EIF3C
ACAT2
ZNF408
PROSER3
HSPB6
EIF4A3
DCAF7
BCAS3
ARHGAP1
NMT1
FIG4
DCAKD
AK9
TMEM242
TAF6
MTBP
MRPL13
CNPY4
TXNDC15
PIP4P1
COX16
ARHGAP28
TECPR1
NOL3
MTG1
MRPS33
FANCD2
C15orf61
DOLPP1
CCDC28A
THAP10
PSMD3
MAPK1IP1L
LRRC49
BNIP2
MAP3K5
FAM76B
ERAP1
CEP57
SCYL3
RPAP2
PIKFYVE
GLMN
DTWD2
DBR1
WDR61
RCBTB2
ERBIN
CLYBL
THNSL1
ST3GAL3
RTN4
POP5
DCP1A
ARMH3
TMEM106B
SAE1
RASL11A
ICE2
ADAMTS9
MCM10
DNAJC22
BIRC2
EIF3E
ACY1
RFC5
LZTS2
JAK2
CDC73
ADGRE5
ZBTB4
SLC35G6
POLR2A
NIPA2
METTL2B
CACYBP
RHOF
PPWD1
MCRS1
KCTD9
FADS2
FADS1
DERA
CENPK
CDCA2
RPL37A
RBM6
NANP
BBS2
HAT1
COX14
CCDC97
UFD1
MTHFS
GRPEL2
CDC45
POLD2
PHF1
MBD4
IFT122
CNOT2
ACYP2
ZNF335
PPP2R3B
ITSN1
GOT1
CRYZL1
ABCF1
TMEM131
POLR2M
FUT1
FGF21
FAAP24
ERICH4
DMAC2
CEP89
WDR55
TPD52L2
SLC35B4
MED23
GNB2
ALKBH5
ABHD16B
ZFYVE28
TOLLIP
TMEM138
SF3A3
RFX3
RAB11FIP3
MPI
FAM71E1
EMC10
CYB561A3
CRYBG1
CFAP99
C1QTNF1
XPNPEP3
ST13
PSMG4
DNAJB7
CPEB4
C10orf88
ARHGEF5
SMC3
MLST8
KTI12
HDAC4
FSIP1
FIGNL1
EFHD1
BRICD5
SYT11
SLC35A5
SCAMP3
MRPL10
LRRC46
GON4L
DNAAF2
DLD
ATG3
TSC1
TMC4
SRP54
MYL5
GFI1B
BPHL
ATP5ME
PRPSAP1
MSL2
WASHC4
TMSB10
TIPARP
MZF1
B4GALT3
ATG4C
SLC38A1
RBX1
PNP
DNAJC28
COX8A
AP3S1
ZBTB45
TTC32
MRPL34
ERAL1
DDA1
CREBL2
ABHD8
TUBA1C
TPR
SPSB3
RNF5
PSMD8
ODR4
KIFC1
C19orf25
AGPAT1
TMEM60
PRKACA
PHTF2
KMT2E
DLAT
C1orf115
C12orf43
ARHGEF35
ZNF384
TSEN34
SLC33A1
RPL22
MIGA2
MBOAT7
BRMS1L
ADAM15
ZSWIM4
TMED9
RPL24
CLN3
CBWD5
CBWD3
APOBR
XRCC6
SLC37A4
SEH1L
KDM3A
H4C3
H1-6
FANCA
DESI1
DDX41
VEZT