ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
ING1
MRPS28
PXYLP1
NDUFS7
CBX5
HNRNPA1
CNOT2
OTUD7B
RBKS
BABAM2
POLD2
RARG
ZBTB7C
SMARCD2
KANSL3
FER1L5
NFE2
ITFG2
ZCCHC24
ATXN1L
ZNF827
GPRC5A
REEP6
PCSK4
TAF1A
DONSON
FTL
PKN2
CLK1
METTL3
HORMAD1
WDR7
IER3
FLOT1
TUBB
RAE1
ZFP36L1
MTRNR2L2
MSH3
DHFR
CAPN1
GATD3B
GATD3A
DYNLT1
SYTL3
KDM3A
ZGPAT
ARFRP1
NANP
CCDC174
LOC114841035
FKBP2
STX18
MBD2
RASA4
KDM6B
ASNSD1
ASDURF
TRIP10
GPR108
MAMLD1
EIF5
CTF1
BCL7C
MAML3
NR2C1
MTRNR2L8
PDE6B
RASA4B
NUDT15
UQCR11
ZNF395
BACE2
USP42
RARA
SKIDA1
IMPA1
C19orf12
HECTD4
CTBP2
UROS
BCCIP
MTRNR2L1
KLK10
TRMT1L
SWT1
LIPA
TRIP12
FBXO36
USP1
PTGES3
TMEM241
RNASE4
ANG
CLCN3
ARHGEF35
STAT2
APOF
FAAP24
CEP89
DUS1L
SNRPA
C19orf54
EFEMP2
DPH2
B4GALT2
ATP6V0B
KRT15
NCOA7
CFAP69
PMPCB
AZGP1
DNAJC16
CASP9
PPP2R5A
PLEKHA8
ANKS1B
ARHGEF5
MIGA1
TRABD
CYB5R4
MRPS31
TEX264
CBR4
INTS5
SLC29A2
NCLN
SEPTIN2
HDLBP
NAGLU
UQCRC2
FOXP1
PPP1R13B
USP37
CNOT9
SZT2
MED8
PDCL
RPL37
COL23A1
ALDOA
KMT5A
FXYD3
SREBF1
MED9
RNF207
SMIM20
FAM78B
GMNN
BAZ1B
DRG1
SLC25A16
CDC42SE2
HGH1
GCN1
PSMB4
SERTAD2
FKBPL
ATF6B
NPNT
COLEC11
TSPAN10
NPLOC4
IGFBP6
SOAT2
RASAL1
SPATA25
NEURL2
CTSA
NFIC
SENP8
MYO9A
RNF121
LOC100133315
MRPL54
APBA3
ZSWIM8
CHCHD1
SH3YL1
ACP1
ADAM17
RNF220
PLA2G6
ST8SIA6
MINDY3
CCDC59
ABCC10
SLC11A2
CAPNS1
APOM
BAG6
TP53INP2
AARS2
MELTF
TECPR1
ABHD3
SH2B1
CCL28
C12orf73
GDPGP1
CIB1
RGPD2
RGPD1
RPL5
TDRD3
TNPO3
SPIN1
AFF1
HBP1
COL27A1
KLHDC2
PARP9
DTX3L
ROGDI
FDXACB1
C11orf1
MRPS16
RPS3A
PCTP
TTK
DCPS
VARS1
SOD2
WTAP
FABP5
NAA40
TLR5
GPAA1
EXOSC4
MYADM
RPS19
SCNM1
LYSMD1
KRI1
CDKN2D
ENTPD5
BBOF1
TRIB1
TF
SERPINI1
PDCD10
HDAC9
PCCA
DBP
ATXN2
NOTCH1
EPM2A
LOC105378979
SEMA4G
PACSIN2
KBTBD3
AASDHPPT
ZNF133
FGF13
SLC39A9
ERH
SLC30A4
SAMD12
SIPA1
DNAJC27
TAF6L
HCN3
CLK2
RIMS1
ACYP1
ZC2HC1C
TMED5
CCDC18
MKRN3
CDC42EP1
DUSP4
CGGBP1
C3orf38
DHRS3
BRD2
SRPX2
ARIH2
ZASP
SAP25
SULF2
LCN2
MBD6
DDIT3
CEP70
TRIM38
CDH11
AP2M1
KLF5
MIEN1
TRIM17
SRCAP
LOC730183
TMED10
PCGF2
ZNF77
MINDY2
UBE2V2
ARID4A
MDM2
DZIP3
CIP2A
PRUNE1
MINDY1
BCO2
SLC25A6
DPP9
TRIM54
SLC30A3
DNAJC5G
PSPN
ALKBH7
RBM19
SEC24C
IFT22
ECH1
ZNF318
SP2
SKIV2L
NELFE
ABHD14B
ABHD14A-ACY1
ABHD14A
PTEN
KLLN
SMPD2
PPIL6
CD46
TXNDC11
LRRC1
ESRP1
ACSS3
RPS8
KCNQ4
ZNF746
ATP6V0E2
GPATCH8
INPP5K
KAT6B
AP1B1
ETFRF1
CFAP94
MACROH2A1
ZNF384
ODF3L2
LEKR1
SLC25A35
ZNF85
ANXA7
SEC23A
IGSF10
SNX12
NEPRO
SPATS1
STAM2
ERCC1
LSM8
GBA
FDX1
URGCP
OTUD5
ADA
URGCP-MRPS24
POMP
KLHL24
TBC1D22A
OSGIN2
MRPS36
PIM3
SCAP
AKTIP
HNRNPA1L2
ELOVL4
DLG2
MRPS33
DNAH14
ARHGEF25
DTX3
CNDP2
GRK6
HEXIM1
CCDC71
CCDC102A
DDT
DDTL
KCTD9
CDCA2
PHGDH
SPAG16
FRG2
TP53INP1
SNRNP35
LRRC61
ACTR3C
LARP1
IVNS1ABP
DKC1
MAMSTR
CSTA
CS
POLDIP3
TRIM26
SMAGP
SBNO1
ACBD3
ANAPC15
TAOK3
SUDS3
ADM
ZMIZ2
OTUD6B
HIKESHI
KBTBD2
TBC1D8B
WWTR1
CDHR2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
PRR3
GNL1
CAND1
KCNS3
B4GALT6
IQANK1
FAM83H
DYNLL1
SRSF9
CLIP1
RAB3GAP2
ZBTB20
RNGTT
NR6A1
LUC7L2
SYS1
ESR2
SEC61B
ALG2
ZXDC
ZNF492
CXCR4
NFKBIA
DCAF7
SLC25A53
OPTC
FAM3C
SRSF2
MFSD11
SLC22A4
HIC1
KRT14
ZNF446
KMT5C
MED12L
RPL34
EXD2
TJP3
CCDC120
EPN1
XRCC6
DESI1
CEP78
C16orf70
UFD1
CDC45
LOXL4
LEO1
MCOLN1
BAG2
PCDH1
AXDND1
CYP4F11
MGAT1
MROH1
PSMA3
RBM7
C11orf71
PAXBP1
ENOX2
QSER1
LMF1
SOX8
SRSF3
PITX3
IRF9
GBF1
SIRT4
COX5A
MYL12B
PRKD2
TRIM2
NEK2
ZFP41
CLUAP1
NUDT17
MAP4K5
ATL1
PEX2
STK11
SLC38A1
TMEM167B
ZNF563
MT2A
C12orf65
SLC3A2
IRX3
SCYL3
ISYNA1
MFSD8
ABHD18
PCBP2
FZD4
CALM2
CSTB
BBS9
SREBF2
P4HA1
ZNF22
AASDH
DDX1
TMPRSS12
FAM114A1
RNF10
UGT1A3
PLBD2
CSF3R
DNAJA2
ZBTB44
KCNN4
TMEM79
SMG5
C2orf73
SIKE1
FRMD3
OSBPL1A
THAP7
ACADM
DNAH12
ZNF69
EPHA7
HMGN3
GFM1
LAMTOR5
OR6B2
NDUFA10
MRPL34
ABHD8
ENOSF1
CLK4
MRM1
SINHCAF
EEF1A1
ST3GAL4
PNN
TRAPPC6B
PLEKHG3
MAPT
TENT2
TCF7L2
RAB11FIP2
PELI2
MPZL2
CASD1
FMC1-LUC7L2
FMC1
CLDN7
ZDHHC3
EXOSC7
DSG2
ADRM1
BCKDK
RNF135
RPS14
AGPAT3
MADCAM1
DUX4
CDC14A
ARHGEF33
KRIT1
ANKIB1
ZNF76
PRPSAP1
PRELID3B
CD320
AMER1
RNASE1
HSPA6
POLR2B
NOA1
TPD52L2
ABHD16B
UFSP1
ACHE
ZNF891
ZNF10
PSMD14
DYM
OSR1
SQSTM1
DNAJB1
S1PR2
TECR
MYOZ3
CRNKL1
CFAP61
CLDN4
LRRC59
RNF168
NLRX1
BLVRB
SPTBN4
DYRK2
SYCP2L
GCM2
CALML5
CCDC9
HNRNPLL
SNRPD1
WARS2
TMEM209
SSMEM1
TACC2
DTNB
RND3
MRPS18B
LTBR
POLRMT
EFS
HUS1
PNKD
TOE1
MUTYH
SLC4A2
CDK5
NADSYN1
DHCR7
HEXIM2
ZNF484
SLC30A7
EXTL2
COP1
KIF20A
BRD8
WDR81
OSER1
TAF2
SEMA3E
CCDC130
KCNK6
SH2D3A
YIF1B
NOD1
PTBP1
DDX5
CYB5A
SNX3
ZBTB45
ELP6
PPM1D
SHPRH
ARHGAP35
ZBTB7B
TAF12
DENND6A
SRSF5
RABL6
ZNF572
SYPL1
TMEM129
TACC3
SMG6
PPP1R9B
SUPT7L
SLC4A1AP
C2CD4D
STK32C
RUFY1
CCDC38
AMDHD1
MTFP1
KRT7
ADCK1
NUP85
HIBADH
NIBAN2
DCAF10
CTNNA1
DSC2
GOLT1A
TXNRD1
PAK4
HMG20B
BMI1
COMMD3-BMI1
COMMD3
OBP2B
KLHL7
ANKRD50
AQP5
GXYLT1
GABARAPL1
RBM15
HINT3
H1-0
CDK13
NAGK
SIK3
CYB5R2
PAN2
GSPT1
TKFC
DDB1
THUMPD3
HES4
ZNF503
CUL5
CBY3
PPIL2
ZNF506
FASTKD2
TMEM53
ARMH1
POLR3B
RPS12
R3HCC1L
SPAG8
HINT2
MDP1
CHMP4A
CRY2
KHNYN
CBLN3
REL
PNISR
STRAP
MON1B
MARVELD1
IDH3B
ALS2
ZNF675
RNF19A
SMAD1
CCDC88B
WDR43
FOXJ3
GIT1
ANKRD13B
RNF5
AGPAT1
DMAP1
HLA-E
GSE1
KHDRBS1
UQCRH
LRRC41
KIF22
ITGB3BP
EFCAB7
NR4A1
PLPP2
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
IPO13
RWDD1
DYNC1LI2
PSMG2
CEP76
VDAC2
HSPA9
FAM187A
EFTUD2
CCDC103
NVL
VTI1B
NUP205
RPL21
POLR2E
TBCK
AIMP1
GOSR2
MRPS7
GGA3
DCTN1
C19orf48
ATP5MG
EXOSC5
BCKDHA
REXO1
STAM
SRD5A1
SKP1
HADHB
HADHA
TSNAX
FARSB
BLCAP
TSN
LYRM4
FARS2
UPF2
PES1
ZNF576
IRGQ
SLC35B1
ACTR10
NDUFA4
PNO1
PAK1IP1
C6orf52
CAPRIN1
DPH6
TTC8
PSMD12
COX7A2L
GOLGA5
SUPV3L1
RBBP5
SART3
ISCU
RPS23
ATP6AP1L
TMED1
MRPS5
ZRANB2
FRG2C
IQCG
PI4KB
SMC2
ANAPC7
RPL35A
PDAP1
BUD31
EIF4ENIF1
PCBP1
SELENOF
HS2ST1
NEUROG2
ADK
AP3M1
ICE1
FAM104A
C17orf80
UFM1
RABGGTB
XPNPEP3
ST13
PROSER1
NHLRC3
SF3B3
COG4
RPS27A
CLHC1
NEUROG3
OSGEP
APEX1
TM9SF1
COMMD1
CCT4
PAF1
HES1
PTGES2
HES3
NFKBIL1
DDX39B
ATP6V1G2
CDX2
UBE2I
RPS29
LRR1
PIN4
FZD8
VEZT
FGD6
ARHGAP11A-SCG5
ARHGAP11A
PMAIP1
MRTO4
EMC1
ARHGAP10
TAF9
RAD17
AK6
ZP4
SUCLG1
HOXA4
ATOH1
NEUROG1
EIF2S3
SEC11C
RPL7
RDH10
STK36
RNF25
BICRA
BNIP3
LBX1
IGFBP2
SKIL
NEUROD1
GADD45GIP1
OAZ3
MRPL9
HOXA2
ID2
INSM1
LEFTY2
TPM1
CNPY2
GTF3C4
DDX31
HOXB3
PCBD2
DAPL1
CDCA7L
PDHX
APIP
HOXA3
DCTN3
CDC73
CCDC200
RPN1
DLL4
ARID3C
PHOX2B
C16orf91
TMEM120B
ANKLE2
CCN1
ST18
DLX4
LZTS1
PDHB
CCDC33
ZNF383
PRUNE2
SYBU
PRRX1
ID3
GORAB
MSX1
DUSP6
TLE4
SP5
TPRA1
MYLK4
RBPJ
FOXP2
TMEM107
ANK2
FGF19
ARID3B
DNAJB7
LRATD2
KDM2B
TLE3
CLGN
TLE2
CNTN1
GATA4
RGS12
TMEM70
ELOC
MALRD1
MYRIP
ALKBH5
MRPL38
DSCAML1
RBBP7
SMPDL3A
GADD45G
CCNDBP1
POP5
GRSF1
ERRFI1
NR2F1
KAZALD1
ARSG
KDM8
DMBX1
METTL24
HOXB4
USP17L20
RUNX1T1
MEIS2
CR1L
SPATC1L
CYP26A1
USP17L22
PRDM12