ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039037 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◣ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
MAPKAPK5
ZNF335
PSMD1
CACTIN
ZNF503
DYNC1LI2
NME6
POLR3F
DZANK1
RWDD1
TAOK3
SUDS3
PSMG2
CEP76
VTI1B
IPO13
NUP85
FAM187A
EFTUD2
CCDC103
VDAC2
NVL
HOXA2
GATA4
STAM2
SKP1
LYRM4
FARS2
HSPA9
NCLN
GOSR2
TBCK
AIMP1
UBXN10
UPF2
DCTN1
SRD5A1
POLR2E
NUP205
ATP5MG
IMPG1
TSN
REXO1
IFI16
EXOSC5
BCKDHA
COX7A2L
MRPS7
GGA3
SEC61B
ALG2
BLCAP
C19orf48
STAM
TSNAX
MRPS5
ACTR10
ICE1
NTRK2
SLC35B1
RPL21
GOLGA5
TTC8
VARS1
PSMD12
PNO1
ARHGEF10L
FARSB
SUPV3L1
HADHB
HADHA
BBS9
PES1
FAM104A
C17orf80
PAK1IP1
C6orf52
HOXB3
HOXB5
PI4KB
HAND1
FRG2C
RABGGTB
EIF4ENIF1
USP1
ZRANB2
MECOM
ZNF576
IRGQ
ETFBKMT
XPNPEP3
ST13
RBKS
BABAM2
ADK
AP3M1
ANAPC7
UBE2I
SMC2
CELF4
SCRG1
TM9SF1
UFM1
RPS23
ATP6AP1L
LAPTM4B
DPH6
RPS12
RUNX1T1
IQCG
RPL35A
LRRN4
NDUFA4
CAPRIN1
SART3
ISCU
ERI3
SF3B3
COG4
PCBP1
PAF1
TBX2
SELENOF
HS2ST1
PROSER1
NHLRC3
NFKBIL1
DDX39B
ATP6V1G2
RBBP5
SUCLG1
CLGN
TMED1
RPS27A
CLHC1
NEO1
DUX4
OSGEP
APEX1
OR6B2
NDUFA10
SIRT4
APOM
BAG6
TBX3
NR2F1
COMMD1
CCT4
OAZ3
MRPL9
DMD
HOXC4
HOXC6
VPS13A
CITED2
DMAC1
CCN1
PTGES2
ELOVL6
HEXIM2
KDM2B
HOXA4
HOXA3
PDE12
CD244
UNC5C
RARB
BICRA
NTAQ1
MRTO4
EMC1
SHOX2
RSRC1
PRXL2A
ANKLE2
LOC102723360
MEIS1
HES1
PDAP1
BUD31
LIN28A
PLEKHF1
NDUFV2
ZAP70
LZTS1
PLAGL1
TMEM141
STK36
RNF25
TLE3
EIF2S3
PRUNE2
DIAPH3
NUBP1
PDE6B
CXXC4
MELK
TMEM120B
KRTAP23-1
MGST1
DCTN3
ARID3C
CPA1
PIN4
ZNF608
RPL7
RDH10
CYP26A1
SNCG
MMRN2
FAM205A
ZFHX4
SKIL
METTL24
SLC19A2
WT1
SSH1
TAF9
RAD17
AK6
TPM1
RARA
EMP1
TTI2
P2RX6
CNR1
NXPH2
MRTFB
ADAMTS8
ASPG
ZNF3
COPS6
ACKR3
FRG2
TMEM9
ARHGAP11A-SCG5
ARHGAP11A
TYRO3
HIP1
ID2
ERVW-1
FLVCR1
PAEP
FOXP2
SEH1L
PPFIA2
HOXB9
COLEC12
TLE2
NIBAN1
MEOX1
TMEM14B
ZGPAT
ARFRP1
CATSPERG
PACRGL
PGPEP1L
KIAA1217
LIX1
RPN1
POP5
FGF7
USP34
LRIG3
ZNF587B
GADD45A
SOX5
LYPD1
TUBB
MDC1
SEPTIN9
TNP1
RBPJ
GC
CNPY2
RPS24
POLR3A
PLCH2
PKDCC
SPTBN1
HOXB8
HOXB7
GOLGA8T
GOLGA8K
TMEM107
BNC2
SCMH1
PPP1R3D
FAM217B
SH3RF2
ACVR1
NDUFS7
HOXC5
EIF3D
CCDC183
PEDS1-UBE2V1
PEDS1
CFLAR
CCDC200
POLR2D
KDM3A
TXNRD1
CYP51A1
PCDH18
GABRB2
SERINC3
RPS29
LRR1
SLC48A1
KRTAP13-1
DSCAML1
ZBTB18
GADD45GIP1
CCNDBP1
HOXA6
HOXA5
PCDH15
SPRR2F
CCDC174
TLE4
SMAD3
SACM1L
FBXO34
ITGA3
CNTN1
SALL4
AKAP12
GBP3
RND3
SH2B1
ZFHX3
PKNOX1
SVOPL
POLDIP3
ABCC9
SEC11C
TMEM14A
NAGLU
ADRB3
H2BC5
H1-4
FEM1B
CCDC59
EVPL
KANK1
TMSB4Y
FZD8
ERCC1
ZSWIM6
POU2F1
CBFA2T2
GOLGA8N
GOLGA8H
MYPN
AQP1
ECHDC1
CAPN7
RAPGEF4
AKAP13
PDZRN3
TCF7L2
EYA1
CDC42EP3
SLC22A5
CDIN1
SNX16
GPR82
ZNF383
GORAB
VANGL2
SIPA1L1
NPM3
FGF8
REC8
SLCO2B1
HERC6
TBX18
SVEP1
IGF2BP3
C9orf153
GTF3C4
DDX31
CDC73
HUS1
PPP1R21
RNASEH2B
CCN2
MPDZ
NELL2
BCL11B
SORBS2
SCHIP1
GFRA3
SPRY1
NNMT
C1orf105
ZYX
FAM131B
SFXN3
PDZD7
PGF
FOXP1
MXD1
ACY3
SPIRE1
EPC1
TRPS1
HMX2
RBM20
MXRA7
C12orf29
GYPC
PFKFB3
OSBP2
NFIB
RCOR3
FSIP1
SLC7A7
ZNF341
UBA3
ARL6IP5
JCAD
TNFRSF19
HEY2
HMGCS2
PDK1
PDGFRA
NRG2
ERCC4
SIGLEC15
SCOC
PGK1
WDR82
CDK6
ASXL3
TMCC3
MYLK3
R3HCC1L
ZNF430
ID3
ZP3
KCTD7
NT5C3A
GDPD5
GNGT1
TMEM185A
USP17L20
USP17L22
KCNIP4
SEMA3E
RAB17
HAPLN1
COPZ1
KIF4B
ZNF746
RERG
CDH18
HNRNPD
GPSM3
OTUD4
RNF207
PBX2
INPP4B
TYRP1
PDE6A
SLC7A5
ANKRD33B
CCDC175
ALKBH5
IRS2
VTN
SARM1
SHB
RCOR1
SLC25A6
TEPSIN
NDUFAF8
VOPP1
SYNJ2BP-COX16
SYNJ2BP
MAD2L2
DRAXIN
CACYBP
ANXA11
FHL2
BNIP3
SRSF11
LRRC40
TCF4
THRA
MGST2
SALL3
ABCA4
PLA2G2E
DUSP6
SSBP3
CEP70
CFAP69
UBL4B
TRIP12
FBXO36
CD248
SLC9A3R1
ESRRG
CDK15
PCNX4
ZNF853
CDH3
WDFY3
NDUFB3
FAM126B
ENTPD4
ABLIM3
SERTAD2
ZNF280D
ACYP1
ZC2HC1C
MYOM2
MID1
PKP2
KRT18
NR2F2
ZNF367
DLG2
CRKL
ELAPOR2
ZSCAN30
CS
MEGF6
ITGBL1
OLFML1
SLITRK6
ALPK2
PCBD2
CPPED1
DNAH12
HSPB3
MPPED2
WWP2
TNNT2
SRI
SPRED2
BNIP2
IL1RAPL1
NR2F6
HNRNPA2B1
CBX3
PDHB
CLASP2
ATXN2L
RIPOR2
LIPC
DHRS3
CEP41
SNX8
USP2
PLAAT2
MEIS3
PDCL3
CSRP1
C9orf92
FNDC5
SUPT7L
SLC4A1AP
KAT6B
UBE2H
QPRT
CELF2
SLC28A3
CTF1
BCL7C
GRWD1
ARHGAP28
DIP2C
ELK4
RANBP17
GFRA1
RGS5
PAQR8
PMFBP1
SKIDA1
DGKZ
SEC24A
DNAJB4
ALX1
RASSF4
ART5
ART1
NEUROG2
NEUROG3
HES3
CDX2
VEZT
FGD6
PMAIP1
ARHGAP10
ZP4
ATOH1
NEUROG1
LBX1
IGFBP2
NEUROD1
INSM1
LEFTY2
DAPL1
IGFBP6
CDCA7L
PDHX
APIP
DLL4
PHOX2B
C16orf91
ST18
DLX4
CCDC33
SYBU
PRRX1
MSX1
SP5
TPRA1
MYLK4
ANK2
FGF19
ARID3B
NFE2
DNAJB7
LRATD2
SOAT2
RGS12
TMEM70
ELOC
MALRD1
MYRIP
MTRNR2L2
MSH3
DHFR
MRPL38
RBBP7
TRIP10
GPR108
SMPDL3A
GADD45G
GRSF1
ERRFI1
KAZALD1
ARSG
KDM8
DMBX1
HOXB4
MEIS2
CR1L
SPATC1L
MTRNR2L1
PRDM12
TRABD2B
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
KMT2A
MRPL34
ABHD8
MSX2
PAX6
BFSP1
RASSF2
IER3
FLOT1
LPIN1
EVA1A
NEK3
SPCS1
GLT8D1
FGR
HOXB1
PLEKHO2
INAFM2
HOXA1
TMPPE
MBD2
GLB1
CBX4
DBX1
CACNA1D
SH3BP2
AXDND1
RNF149
UPF3A
SULF1
METTL11B
LYL1
RPS10-NUDT3
RPS10
KDM6B
PANK4
HES5
GTF3A
MTRNR2L8
TESC
NELFA
DDA1
HSPA1B
ARID5A
ABCG2
TLE1
RAI14
STK38
ARHGAP24
KCNAB2
JAK3
NUTM2D
SP2
PARK7
CCPG1
C15orf65
TIGD1
EIF4E2
FRAT2
RPS6KA1
ID1
SEC14L1
SMC6
GEN1
SASH3
C11orf24
C12orf73
MRS2
SLCO4C1
PHC2
ATG16L2
KIF21B
HOXD3
NCOR2
GRHL3
PRDM10
TBC1D8
PAX8
CCDC88A
SPECC1
BRWD1
NADK
NCOA2
FGFRL1
ENO1
WDR6
KLF17
NBEAL2
BIN2
SNX1
CIAO2A
SKIV2L
NELFE
NKD1
EFHD2
OTX1
FAM110A
CPSF4L
ADM
USP17L21
USP17L12
USP17L11
TMEM104
NAT9
LPCAT3
MTMR4
REV3L
DIAPH1
NBPF1
USP17L18
EMP3
CCDC114
ZNF76
TRAF4
PLEC
MEF2C
CAMTA1
USP15
SNX3
WNT10B
RARG
MEF2D
KMT2E
SOX21
MXI1
LNPEP
CABIN1
PPP1R18
RASSF5
SPG7
DENND2D
DDX3X
LIG3
CBFA2T3
POR
ZCCHC3
NFKBIA
IQCH
AAGAB
ZNF414
ZDHHC1
CD38
INAVA
ING1
VAV1
HEBP2
TRERF1
BCL3
CMTR1
RAC2
ATP23
PNKD
CNOT2
FTL
IQGAP2
PCNA
SYNPO
POLR2J3
SPACA1
GPAA1
EXOSC4
LRIG1
MINDY2
OTUD7B
PKN2
PKM
CLDN2
H6PD
PPIB
PDPN
RXRA
RAB11B
NDFIP2
COL23A1
MAPKAPK3
RYBP
CDX1
ANKRD1
SMARCD2
GALNT10
PLCB2
USP3
NKIRAS1
PDE4D
ADCY7
PCTP
IFRD2
PEX14
DFFA
YTHDF2
FAM120B
HMGCS1
PRDM1
ARHGAP4
LRCH4
FBXO24
CFD
MRPS24
SLC35E2B
HESX1
PXYLP1
TBRG4
ADORA2A
HIBADH
ARIH2
TUBB3
NR1D2
RNF139
SH3TC1
CYCS
ZDHHC4
ZNF740
CSAD
RNF166
CNTN4
SP7
DYNLL1
BAIAP2
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
LTBR
DPP9
ANKMY1
CLIC4
SEMA6D
NR2C1
CPT1A
KCTD6
ZBTB25
ZBTB1
DTX4
AKIRIN1
IL6R
PRSS56
SEC22B
KIF26A
DTNB
ATXN1L
SLC35E2A
CYTH4
AGO1
TPST2
MYEOV
FOS
PTGES3
LRGUK
ZFX
RBL2
HNF1A
SRPRA
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
HHIP
PCDH11Y
FAF2
NXPH4
ARHGEF1
ADGRL2
UPP1
CASC3
CALM2
DMRT3
CD164
CTTN
SLC39A13
SLAMF8
TYROBP
ANKRD13D
TRMT6
MCM8
RNF103-CHMP3
RMND5A
AHDC1
CSRNP1
SNAPC3
BAZ1B
SPATA25
LAPTM5
PRRC2A
AIF1
USP42
MYADM
NOTCH2NLA
UNC13D
STX18
CDC42EP2
SLC10A2
SBNO2
CLTC
SEMA4D
PIP4P2
ARHGAP45
MAP2K1
MAD1L1
SYNJ2
ZNRD2
MTF2
KCNH2
FAM89B
EHBP1L1
RXRB
IL21R
PPCDC
MTCH1
DGAT2
CENPH
SLC43A3
DNAJB8
ZNF25
RNF125
PHF19
RASGRP2
LYPD6B
ERLIN2
PEAK3
THRAP3
COX5A
WDR59
MRPS31
USP17L15
NOTCH2NLC
MIDN
PDE1B
MAP1S
EIF4H
KRI1
CDKN2D
TTYH1