ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584303 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◣ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
RABL2A
PSMD1
NME6
MAPKAPK5
RWDD1
IPO13
POLR3F
DZANK1
CACTIN
ZP4
TAOK3
SUDS3
PSMG2
CEP76
FAM187A
EFTUD2
CCDC103
NUP85
VDAC2
GRSF1
NVL
HSPA9
DYNC1LI2
ZNF503
SP5
RPL21
C19orf48
POLR2E
PMAIP1
STAM2
STAM
GOSR2
TBCK
AIMP1
TSN
ATP5MG
VTI1B
REXO1
NUP205
LEFTY2
MRPS7
GGA3
EXOSC5
BCKDHA
NDUFA4
DCTN1
CAPRIN1
SEC61B
ALG2
BLCAP
ZNF576
IRGQ
UPF2
PES1
PNO1
SKP1
NEUROG2
NCLN
PAK1IP1
C6orf52
FARSB
RBBP5
SLC35B1
TSNAX
ACTR10
DPH6
ARHGAP10
SELENOF
HS2ST1
GOLGA5
SRD5A1
HADHB
HADHA
UBE2I
TMED1
LYRM4
FARS2
RPS12
PROSER1
NHLRC3
PCBP1
VARS1
RBKS
BABAM2
TTC8
PHOX2B
PSMD12
ICE1
RPS23
ATP6AP1L
SPECC1
MRPS5
ANAPC7
USP1
SMC2
COX7A2L
EIF4ENIF1
ZRANB2
PI4KB
SART3
ISCU
FAM104A
C17orf80
HES3
IQCG
RPL35A
SUPV3L1
RABGGTB
PDAP1
BUD31
ADK
AP3M1
UFM1
PAF1
CNTN1
APOM
BAG6
TM9SF1
PRSS56
SF3B3
COG4
PAX6
XPNPEP3
ST13
NKD1
PTGES2
PRRX1
OSGEP
APEX1
COMMD1
CCT4
PDZD2
PIN4
NFKBIL1
DDX39B
ATP6V1G2
RPS27A
CLHC1
STK36
RNF25
LZTS1
NEUROG1
GRIP1
NEUROG3
RPS29
LRR1
TCF7L2
BICRA
MSX1
EOLA2
SUCLG1
OR6B2
NDUFA10
MUC12
IGFBP2
OR2L13
OR2AJ1
FRG2C
EIF2S3
SMC6
GEN1
ANKLE2
KLF17
TAF9
RAD17
AK6
RXRB
HSD17B8
SLC39A7
SLAMF8
PDE6B
OAZ3
MRPL9
ZSWIM6
OTX1
SEC11C
PDHX
APIP
ARHGAP11A-SCG5
ARHGAP11A
HOXA4
CDX2
KLHL25
GADD45GIP1
RPL7
RDH10
CPSF4L
GPR78
ATOH1
CDC73
GADD45G
CR1L
MRTO4
EMC1
PDPN
PCBD2
BNIP3
GTF3C4
DDX31
MSX2
GORAB
HOXB3
HOXB4
CDX1
HAO1
DUX4
HES1
CNPY2
RPN1
METTL11B
WBP1L
TMPPE
GLB1
ST18
RBBP7
PNKD
KDM2B
CSRNP1
ZNF383
DMBX1
FZD8
TRABD2B
SMPD1
AXDND1
STK38
SKIL
ALKBH5
SRCIN1
TLE3
PRUNE2
TSHZ1
ZADH2
FGF2
CCDC33
MALRD1
ZGPAT
ARFRP1
CACNA1D
SP7
LZTFL1
TTYH1
GAD2
CDH12
ALDH1A2
PALM2AKAP2
SNCG
MMRN2
CTXN3
MMP3
SP8
LRATD2
HOXA3
HES7
EBP
FRG2
MESP1
MRPL38
FGFR2
MYRIP
PDHB
LIG3
SULF1
HSPA1B
HOXD3
ONECUT2
CLGN
UROD
HECTD3
ADGRL2
SRSF11
LRRC40
NKX2-2
ABLIM3
SYBU
MYBPH
NEBL
NR6A1
GIMAP5
MEIS2
PBX3
YWHAB
LY6G6D
C1QL3
TKT
PAX4
CDC42EP2
CPVL
CHN2
RNF32
VEZT
FGD6
SPCS1
GLT8D1
PDE12
DLL4
TTLL6
LRRC8C
FMOD
FAM3C
EIF4H
SLITRK5
PCBP4
CLDN9
SOST
NUP210
APBA1
TBX3
FAM72C
SRGAP2B
FAM72D
FOXD1
HOXB8
GUK1
C11orf95
TBC1D8
SNX1
CIAO2A
MEIS3
ZDHHC1
FBXW11
B4GALT5
DGKZ
SUSD6
HERPUD1
TLE2
LYPD6B
FAM107B
TMEM123
MYLK4
IPO8
RASL10B
RABL3
GTF2E1
DKK1
NELFA
ITPRIP
TMEM131L
KDM8
HHIP
CCDC200
H3C12
H2BC17
H2AC17
ARSI
HOXD1
CCN1
SH3D19
PTGES3
CNTN4
ULBP3
MYORG
C9orf24
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BNIP2
RPS24
POLR3A
COQ3
TK1
HOXA9
HOXA7
CS
HAS2
GCNT2
EML4
CMTR1
TRAP1
ENO1
YAP1
LINGO1
OR52E2
PAX2
HOXC4
RPH3A
UQCC2
EYA1
LIN28B
ZNF471
AGO1
GATA3
PKNOX2
CCDC43
CFAP410
KLF6
HOXB7
RPS10-NUDT3
RPS10
TCHP
MAB21L2
PPM1B
EXOC6B
PAPPA
INSM1
CCDC85A
DAPL1
PANK2
RARA
TPRA1
ARHGAP24
CUEDC1
KCNJ5
TPM1
RNF138
LIMCH1
CHD8
TPCN2
SEPHS1
NEUROD1
RGSL1
AXIN2
TMEM70
ELOC
TMEM120B
ZNF746
PROX1
EPHA5
HOXB1
JCAD
KIAA1522
MAPK8
MUSTN1
ITIH4
CCDC169-SOHLH2
CCDC169
NABP1
ADAMTS15
GYPC
DSCAML1
QPRT
HEBP1
HOXA1
FGF19
CDK5R1
USP17L20
USP17L22
SERTAD3
ABCB5
ZFHX3
FBXO46
RSPO4
MEIOSIN
PCDH18
FAM162A
CCDC58
LRGUK
VAMP8
VAMP5
MPZL2
WASHC3
LIN28A
SLC7A5
USP17L15
MTCH2
CYP26A1
NPEPL1
KRTAP3-1
CBX4
ZNF341
CRYM
KCNN2
DTNB
EIF2S1
ATP6V1D
SPDYA
EMP3
CCDC114
THEG
ID2
PLAGL1
SHMT2
ASIP
NFE2
CLDN2
SREBF1
SYT7
SH2B1
COL11A2
EVPL
MCC
BBS9
ID3
FOXP2
CYP51A1
BRINP1
RUNX1T1
KDM3A
ADM
LRRC10B
DST
CLDN3
TESC
SOX12
CERS6
LRAT
STK4
TOMM34
OAS1
NRARP
LSM14B
TRDMT1
NUTM2D
DCTN3
ARID3C
MSI2
IRS2
ZGRF1
LARP7
GABRR1
KAT6B
SALL4
CCNI
ACSM6
OCLN
CD99L2
ZMAT4
MRPL34
ABHD8
DDA1
PAX3
LIMS1
ABCA5
KDM6B
PACSIN2
NEDD9
WBP4
ELF1
TBC1D10A
ANO4
TMEM114
KMT2A
MPP4
TMEM107
ANK2
REC8
SALL1
KIRREL2
CD36
RARB
XIAP
VENTX
MBNL3
SLC10A2
HHIPL2
MAP1A
METTL24
PKD1
PEPD
PAX8
CYREN
ARID5B
SRGAP2C
FAM72B
CENPBD1
DHX32
TCF20
GAS2L1
ERCC1
RASL11B
RCOR3
STARD4
CEMP1
PDPK1
CATSPERG
TBL1XR1
BAZ2B
CDK15
GBX2
SSH1
MXD3
FTL
TLE4
SIPA1
PPFIBP2
PTGR1
RXYLT1
ASS1
SOCS3
CD9
LPIN1
OR8J1
CSTF2T
RPRM
PRICKLE1
MRGPRE
CSNK2A2
TLE1
PHC2
KRT20
C3orf52
BTRC
ZFHX4
NPAS4
CER1
SERPING1
RBM20
TARS1
H4C6
PAH
ASCL1
MSGN1
ERRFI1
HRK
HOXC5
HOXC6
ZCWPW1
MEPCE
TFDP2
STX3
HOXA6
BRWD1
CBX5
PLEKHA5
RNF38
ECM2
ZNF76
AHDC1
DEFB106B
DEFB106A
DLL3
PRDX6
PRTG
SLC39A8
ZNF474
SPATA25
NEURL2
CTSA
SPRY4
GXYLT2
MVB12A
TAGLN3
EPHA1
MGST1
DDX46
DMAP1
RBFOX2
CEP97
NFIX
WNT5B
ADAMTS19
STRADA
CTBP2
RCN1
NAV1
ERLIN2
PEX14
DFFA
SPIN1
DUSP12
PLEKHA6
CCNDBP1
TLN1
CREB3
REST
RFFL
ACOX2
BAK1
GNAI2
KRTAP4-12
GLI1
KLHL15
IFI16
OTUD7B
CASC3
BCAT2
DUSP4
KSR1
NDUFS7
LHX2
SOX6
ZBTB45
GCK
TPST2
GPX3
PIM1
ATXN7
STRA6
DRAP1
C11orf68
ARHGEF38
TRIP12
FBXO36
PCF11
ABHD2
LBX1
HOXA2
IGFBP6
CDCA7L
C16orf91
DLX4
DUSP6
RBPJ
ARID3B
DNAJB7
SOAT2
GATA4
RGS12
MTRNR2L2
MSH3
DHFR
TRIP10
GPR108
SMPDL3A
POP5
NR2F1
KAZALD1
ARSG
SPATC1L
FOXP1
MTRNR2L1
PRDM12
BFSP1
RASSF2
IER3
FLOT1
EVA1A
NEK3
FGR
PKDCC
PLEKHO2
INAFM2
MBD2
DBX1
SH3BP2
RNF149
UPF3A
CITED2
ZNF608
LYL1
VOPP1
HNRNPA2B1
CBX3
HUS1
DHRS3
TMEM14A
HEXIM2
PANK4
HES5
GTF3A
ETFBKMT
MTRNR2L8
ARID5A
ABCG2
RAI14
NEO1
KCNAB2
JAK3
PDZRN3
SP2
PARK7
CCPG1
C15orf65
TIGD1
EIF4E2
HNRNPD
FRAT2
RPS6KA1
ID1
SEC14L1
SASH3
C11orf24
C12orf73
MRS2
SLCO4C1
ATG16L2
KIF21B
NCOR2
GRHL3
PRDM10
UBXN10
CCDC88A
LYPD1
ARHGEF10L
NADK
NCOA2
FGFRL1
WDR6
NBEAL2
BIN2
SKIV2L
NELFE
SIRT4
EFHD2
FAM110A
USP17L21
USP17L12
USP17L11
TMEM104
NAT9
LPCAT3
MTMR4
REV3L
DIAPH1
NBPF1
USP17L18
TRAF4
PLEC
MEF2C
CAMTA1
USP15
SNX3
LRRN4
WNT10B
RARG
MEF2D
KMT2E
SOX21
MXI1
LNPEP
CABIN1
PPP1R18
RASSF5
SPG7
CDC42EP3
DENND2D
CCDC174
ZNF367
DIAPH3
DDX3X
IMPG1
CBFA2T3
SHOX2
RSRC1
POR
ZCCHC3
NFKBIA
IQCH
AAGAB
TYRO3
ZNF414
CD38
INAVA
ING1
VAV1
HEBP2
TRERF1
BCL3
TUBB
RAC2
ATP23
CNOT2
LRIG3
IQGAP2
PCNA
SYNPO
POLR2J3
SPACA1
GPAA1
EXOSC4
MEOX1
RNASEH2B
LRIG1
MINDY2
NTRK2
PKN2
PKM
H6PD
PPIB
RXRA
TNFRSF19
RAB11B
NDFIP2
COL23A1
MAPKAPK3
RYBP
SHB
ANKRD1
SMARCD2
SMAD3
GALNT10
PLCB2
USP3
NKIRAS1
PDE4D
ADCY7
PCTP
IFRD2
YTHDF2
FAM120B
CEP41
HMGCS1
PRDM1
ARHGAP4
LRCH4
FBXO24
CFD
MRPS24
SLC35E2B
DLG2
HESX1
PXYLP1
TBRG4
ADORA2A
HIBADH
ARIH2
TXNRD1
TUBB3
NR1D2
RNF139
SH3TC1
CYCS
ZDHHC4
ZNF740
CSAD
RNF166
IGF2BP3
DYNLL1
MECOM
BAIAP2
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
LTBR
DPP9
ANKMY1
ERI3
CLIC4
SEMA6D
NR2C1
CPT1A
KCTD6
ZBTB25
ZBTB1
DTX4
AKIRIN1
IL6R
SEC22B
KIF26A
TTI2
ATXN1L
SLC35E2A
CYTH4
MYEOV
FOS
ZFX
RBL2
HAND1
HOXB5
HNF1A
SRPRA
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3
PCDH11Y
FAF2
NXPH4
C12orf29
ZNF3
ARHGEF1
UPP1
CALM2
DMRT3
CD164
CTTN
SLC39A13
TYROBP
ANKRD13D
SLC25A6
TRMT6
MCM8
TBX2
RNF103-CHMP3
RMND5A
SNAPC3
BAZ1B
LAPTM5
PRRC2A
AIF1
USP42
MYADM
NOTCH2NLA
UNC13D
STX18
SBNO2
CLTC
SEMA4D
PIP4P2
ARHGAP45
MAP2K1
VANGL2
MAD1L1
CXXC4
SYNJ2
ZNRD2
MTF2
KCNH2
FAM89B