ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584306 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◣ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2A
PSMD1
NME6
RABL2B
MAPKAPK5
TAOK3
SUDS3
RWDD1
CACTIN
POLR3F
DZANK1
DYNC1LI2
VDAC2
NUP85
IPO13
NUP205
HSPA9
VTI1B
PSMG2
CEP76
GOSR2
RPL21
NVL
POLR2E
SEC61B
ALG2
ATP5MG
C19orf48
NEUROG2
FAM187A
EFTUD2
CCDC103
TBCK
AIMP1
FARSB
ACTR10
EXOSC5
BCKDHA
LBX1
MRPS7
GGA3
STAM2
HADHB
HADHA
ZNF576
IRGQ
PNO1
REXO1
PAK1IP1
C6orf52
SKP1
DCTN1
BLCAP
STAM
SRD5A1
PES1
CAPRIN1
TSNAX
LYRM4
FARS2
NCLN
TSN
SART3
ISCU
SUPV3L1
UPF2
CDX2
ANAPC7
RPS23
ATP6AP1L
COX7A2L
IGFBP2
ZRANB2
SF3B3
COG4
FZD8
VEZT
FGD6
PCBP1
NEUROG3
XPNPEP3
ST13
DNAJB7
IQCG
RPL35A
ARHGAP10
VARS1
TTC8
GOLGA5
RPS27A
CLHC1
NDUFA4
SLC35B1
HES3
RABGGTB
DPH6
PDAP1
BUD31
PI4KB
ADK
AP3M1
RPS12
SMC2
EIF4ENIF1
RBBP5
PSMD12
ZNF503
UFM1
TMED1
HES1
SELENOF
HS2ST1
MRPS5
MALRD1
ICE1
FAM104A
C17orf80
USP1
RBKS
BABAM2
UBE2I
OSGEP
APEX1
KDM8
INSM1
BNIP3
NFKBIL1
DDX39B
ATP6V1G2
ATOH1
PAF1
TM9SF1
PROSER1
NHLRC3
PRDM12
C16orf91
NEK3
PTGES2
DCTN3
ARID3C
PIN4
HOXA4
APOM
BAG6
FGF19
RPS29
LRR1
TAF9
RAD17
AK6
OR6B2
NDUFA10
BICRA
CR1L
ERRFI1
NUTM2D
DBX1
TPM1
ANK2
TMEM120B
MYLK4
BFSP1
TLE4
TESC
EVA1A
RBBP7
ARHGAP11A-SCG5
ARHGAP11A
TRABD2B
CCN1
PRRX1
MRTO4
EMC1
ZP4
SULF1
LZTS1
SYBU
SUCLG1
RAI14
ID2
SOX21
SEMA6D
KIF26A
KDM2B
COMMD1
CCT4
SLC7A5
PMAIP1
EIF2S3
TMEM107
TPRA1
HOXB3
PDHB
HOXB4
GTF3C4
DDX31
LRIG1
FRG2C
HOXB1
RGS12
GADD45GIP1
DMRT3
STK36
RNF25
DTX4
RASL10B
CNPY2
SPACA1
RPL7
RDH10
HNF1A
SEC11C
NEUROD1
TMEM14A
DDX3X
PCBD2
CAMTA1
LRATD2
TBX3
HOXD3
SMPDL3A
ANKLE2
CCDC33
DLX4
DSCAML1
GPR176
MEIS2
C12orf73
CLDN2
PCDH11Y
PHOX2B
PAX6
DLL4
GFRA3
WDR59
TPST2
RPN1
ZNF383
FOXP2
SLC10A2
PHC2
CACNA1D
HSPB8
DMBX1
MYO10
SKIL
ID1
PDZRN3
SALL1
METTL24
BAIAP2
NEUROG1
DUX4
CEP41
PRUNE2
KIF21B
PDHX
APIP
OAZ3
MRPL9
ZNF367
PAX3
MXI1
PANK4
HES5
REV3L
GTF3A
ZFX
ABLIM3
LPIN1
FOXD3
PAX8
CDC73
VOPP1
PDPN
HHIP
CPSF4L
ZFHX4
ENO1
CLEC18C
ALKBH5
ZDHHC1
KLF17
CNTN4
DAPL1
PLEKHA5
NOXO1
GFER
RGL1
SEC22B
MSX1
LRIG3
TNC
ADGRL2
OCLN
NEDD9
GAD2
ASXL3
GORAB
LHX2
FSTL1
FAM107A
CLGN
DHX32
METTL11B
FBLN1
CDC42EP2
PDE6B
CNTN1
TBC1D8
PNKD
OR8J1
GADD45G
GFRA1
LIN28B
UPF3A
PKNOX2
CDH16
GATA3
ARHGEF28
GCSAM
OTX1
EPHA5
BRWD1
HNRNPA2B1
CBX3
SOCS3
AXDND1
TIGD1
EIF4E2
ZGPAT
ARFRP1
HSPA1B
ABCG2
HOXA3
SALL4
RPS10-NUDT3
RPS10
JAKMIP1
HOXC5
TMPPE
GLB1
LIX1
MEIS3
VCAN
MEOX1
PPP2R5A
ST18
TYRO3
FAM120B
DLL1
PDE12
DNMBP
CATSPERG
B3GALT5
DAAM1
TLE1
NRG2
ZBTB25
ZBTB1
FGFR2
ZNF746
HOXC4
ELMOD2
KAZALD1
TLE3
STRA6
RPS24
POLR3A
FJX1
PDE1B
CA14
MEF2C
VSTM2L
FRG2
MYRIP
EIF4E3
ZNF608
DHRS3
STXBP5L
TRIM71
SCARF1
RUNX1T1
SYNPO
ATOH8
OR5A2
HOXB8
HOXB7
YAP1
MAB21L2
TAGLN3
LIPG
TLE2
ZNF341
NNMT
NR2F1
GPR82
CDK14
RARA
DRD2
TCF4
CEMP1
NXPH2
CNKSR3
LRGUK
XIAP
RAN
MUSTN1
ITIH4
ATP6V1B1
CS
PLAGL1
NRARP
TANC1
FRRS1L
KMT2A
ECM1
POP5
ZFHX3
USH1C
CER1
FABP5
TTYH1
BAZ2B
PIGR
FHL1
SLC15A3
CBY2
RYBP
TRAP1
WBP1L
ME2
SLC39A6
PCDH18
SLC22A2
ALDH1A2
CPLX1
MTMR7
NELFA
HNRNPD
OTOL1
CYP51A1
CCDC88C
LIG3
MRPL38
ZCWPW1
MEPCE
CSN3
EIF2S1
ATP6V1D
CRABP2
RCOR3
ALOX5AP
LIN28A
ARMC12
AJUBA
TIAM1
LRRN1
LOC150051
IGFN1
SPCS1
GLT8D1
LRRC10B
CYP26A1
SYTL2
LDLRAD3
KEAP1
KRT20
REC8
FAM124A
MSX2
IFI16
TMCC3
SLC14A1
PAX7
ARHGAP24
ATF3
CACNA1S
NFE2
ZSWIM6
BMPR1B
ANTKMT
METRN
BTF3
LINGO1
STOML2
POU3F1
HOXA2
COX5A
POU2F1
TFDP2
ABCB5
DNMT3B
UPP2
PJA2
ITPRIP
CHD8
CLEC18B
TNFRSF19
PPBP
GJA1
RARB
EIF4H
TEX46
KDM1A
ZMAT4
CATSPERB
TMEFF2
HOXC6
BAMBI
FGFR4
TPO
RBP3
CNN3
PERP
TMEM70
ELOC
SRSF11
LRRC40
NR6A1
FOXO3
HRK
ARL4C
SMC6
GEN1
CRKL
TRDMT1
TP53INP1
PLEKHA6
C1orf141
ADM
CPVL
CHN2
RCOR1
LOC102723360
TBL1XR1
SP8
DGKZ
ADAMTS15
RBPJ
DICER1
CCDC169-SOHLH2
CCDC169
RBM20
MECOM
ARSF
FOXB1
ARHGEF4
IGFBP6
SOAT2
QPRT
NPAS1
SEMA5B
NCOR2
IPO11
LRRC15
NEBL
PTGR1
LRP2
TSPAN13
N4BP3
ACOT6
PEX2
TTLL6
SPRY1
SNX1
CIAO2A
CCDC198
RHOB
PPP1R12B
ACBD5
TRIM2
PLPPR1
ERCC1
CCDC107
TRAF3IP2
HEY1
SKOR1
TAS2R41
NKX2-8
SH2B1
UROD
HECTD3
DST
C21orf62
GIGYF1
WWC2
RXRB
HSD17B8
SLC39A7
ZNF775
RING1
ABAT
OR52E2
CA4
PCBP4
ALPK3
BBS9
PIMREG
FLRT3
AIPL1
USP17L20
USP17L21
USP17L12
USP17L11
USP17L18
LRRC8C
ONECUT2
ATP5MC2
FBXO10
CLEC19A
DUSP6
LMO4
ATXN7
GPC6
SOX11
GDF10
GPR15
PKDCC
SERPING1
ZNF853
KMT2B
GALNTL5
ARHGEF1
NBPF9
SRGAP3
TCF7L2
PANK2
NKIRAS1
NR1D2
PIPOX
BCO1
DRAP1
C11orf68
USP17L22
CCDC43
PACSIN2
CCDC200
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HOXB5
MSI2
SPOCK2
TLN1
CREB3
NEUROD4
SLAMF8
TCHP
CFAP69
CDX1
RFFL
VXN
ID3
ADAMTS10
CALHM6
P2RX6
PRRC2C
SNCG
MMRN2
FGFRL1
NXPH4
NEGR1
VWA1
LYPD6B
ELMO1
PTCH2
TGM3
DTNB
SPTBN1
RPH3A
KCNN2
GPR157
ZNF878
FOXP1
MTF2
SOX6
PYGM
GYPC
NEDD4L
GJA3
ZNF593
C1orf232
NRXN1
NCK1
FLVCR1
ZNF891
ZNF10
WRAP53
TP53
COL5A2
NR2F6
TNP2
PRM3
PRM2
SERPINA6
PRDM13
COL11A2
IDUA
LRRTM1
CTNNA2
KAT6B
IRF2BPL
PRKCA
ACCS
EPB41L5
ACSM6
SIRT4
LIMK2
TTR
TPST1
AGPAT4
ROBO3
RGS3
DPF3
C1orf127
KRTAP12-1
CENPBD1
MDN1
IKZF4
GCK
ELOVL6
SLC39A4
CPSF1
FAM181A
NR5A2
NCALD
C10orf90
NCOA2
TTYH2
KRT9
NEO1
H3-3A
EFNB1
SIK1B
SIK1
CCN2
VEPH1
GBX1
PPP1R3D
FAM217B
IRS2
SCARB1
PAX4
LRP4
LMX1A
HOXA6
DUSP2
SND1
ENTPD4
CETN1
SCN2A
SPON1
G0S2
HOXA1
CSTF2T
FERD3L
LPAR3
ACVR1
MAD2L2
DRAXIN
ASIP
H3C12
H2BC17
H2AC17
CSNK1A1
NPAS4
TRMT9B
KIAA1958
C9orf147
MGST1
KAZN
SSUH2
ZNF436
DLC1
CASC3
SOX12
FGD4
RPS7
PTPRZ1
MTRNR2L1
POLR1D
LNX2
TXNIP
TMEM132C
NDRG4
KDM3A
RBMS3
BRI3
ZFAND4
CMTR1
CEP63
ANAPC13
RXYLT1
ELAPOR2
PRTG
DENND1A
NCAM1
KLB
RIN2
NDUFS7
SPIN1
UBE2QL1
NPTX2
HOXA9
HOXA7
BMP5
USP10
C12orf42
RTN1
DDO
FHDC1
DYRK1B
CDIP1
TANGO6
HDAC9
SELENOP
BCAT2
ZBTB2
LZTFL1
MBNL3
ZIC5
SP5
LNX1
KCNJ13
RBM25
WARS2
TMEM47
TBC1D16
VANGL2
SLC44A3
PDGFA
HES4
HOXB2
ETV5
NR4A3
PAH
ASCL1
SCGB1D1
MXRA7
NUP93
HABP4
TTI2
USP17L15
ETV1
LAPTM4A
ZNF587
TMEM63B
MRPL14
GPC4
FAM71A
MBD2
DGAT2
WT1
EMID1
FLNB
SUN1
RAX
CENPS-CORT
CENPS
SASH1
AGO1
WDR74
SOST
KDM4C
CELSR3
TOX3
PER2
SPHK2
RPL18
FAM83E
MPZL2
RIMBP2
DLG2
TPCN1
PHACTR2
TUBB3
AKIRIN1
DONSON
MFSD3
GPT
TBPL1
BMP7
DLGAP1
PLXNA2
CDK15
UTRN
GAS7
SGK3
GRWD1
WDR47
SULF2
SCUBE2
PEX14
DFFA
CRB2
GPRC6A
DMD
NFIX
JAG2
NUDT1
IP6K3
TRIM54
SLC30A3
DNAJC5G
POLR2J3
HOXD1
C8A
TPPP3
GSG1
RAPGEF4
TSHZ1
ZADH2
CD248
CXCL6
SHOX2
RSRC1
RNF138
CD69
FAM162A
CCDC58
NOTCH1
PLXNB1
CBX5
SDSL
SECISBP2L
PIAS1
RASL11B
HMX3
GATD3B
GATD3A
GNAI2
GUK1
STON1-GTF2A1L
CCNO
SERPINH1
AKR1C2
RDX
ZNF423
NAALAD2
LIMCH1
ZSWIM2
KAT6A
LMNA
MEX3A
LTV1
TAS2R8
TAS2R7
NDUFB3
FAM126B
NAT10
GAS2L3
CCNDBP1
SLC25A6
SEMA4B
PODXL
MAML3
ZIC4
ZIC1
ZGRF1
LARP7
PRSS47
EMP1
UTS2
UBR5
ASPH
PTAR1
C15orf61
KCNJ9
TMEM114
MYH3
SOX5
JDP2
KRTAP3-1
GAS1
CLASP2
CTBP2
ANKRD6
ELAVL4
CNN2
HHIPL2
WFIKKN1
CLUL1
ZNF831
KLHL15
LEFTY2
CDCA7L
ARID3B
GATA4
MTRNR2L2
MSH3
DHFR
TRIP10
GPR108