ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584307 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◣ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
MAPKAPK5
POLR3F
DZANK1
NME6
PSMD1
IPO13
ZNF335
NCLN
DYNC1LI2
TAOK3
SUDS3
CACTIN
RWDD1
NUP85
NEUROG2
VTI1B
VDAC2
POLR2E
MRPS7
GGA3
FAM187A
EFTUD2
CCDC103
HSPA9
NUP205
PSMG2
CEP76
TSN
TBCK
AIMP1
NVL
GOSR2
REXO1
DCTN1
TSNAX
STAM2
RPL21
SKP1
ZNF576
IRGQ
EXOSC5
BCKDHA
C19orf48
SEC61B
ALG2
PES1
STAM
CAPRIN1
PNO1
SRD5A1
RBBP5
BLCAP
SLC35B1
UPF2
FARSB
LYRM4
FARS2
ACTR10
ATP5MG
PCBP1
NEUROG3
PAK1IP1
C6orf52
NDUFA4
HADHB
HADHA
GOLGA5
PSMD12
ZRANB2
TMED1
COX7A2L
VARS1
TTC8
DPH6
SUPV3L1
ANAPC7
LBX1
PI4KB
SART3
ISCU
PDAP1
BUD31
UFM1
MRPS5
ICE1
IQCG
RPL35A
SF3B3
COG4
SELENOF
HS2ST1
RPS23
ATP6AP1L
RABGGTB
ADK
AP3M1
RBKS
BABAM2
USP1
PROSER1
NHLRC3
FAM104A
C17orf80
SMC2
EIF4ENIF1
OSGEP
APEX1
FRG2C
XPNPEP3
ST13
RPS12
RPS27A
CLHC1
BICRA
HES3
PAF1
ZNF503
UBE2I
COMMD1
CCT4
TM9SF1
OR6B2
NDUFA10
HES1
BNIP3
VEZT
FGD6
MRTO4
EMC1
ATOH1
ARHGAP11A-SCG5
ARHGAP11A
FZD8
DCTN3
ARID3C
PIN4
APOM
BAG6
RPS29
LRR1
NEUROD1
RBBP7
GTF3C4
DDX31
INSM1
NFKBIL1
DDX39B
ATP6V1G2
DUX4
C16orf91
ARHGAP10
RPN1
FRG2
ARHGEF1
CCDC33
SUCLG1
NEUROG1
CDC73
EIF2S3
OAZ3
MRPL9
ANKLE2
TAF9
RAD17
AK6
SKIL
PMAIP1
TPM1
PCBD2
CDX2
PDHX
APIP
SEC11C
RPL7
RDH10
CR1L
LPIN1
GADD45GIP1
PRUNE2
PTGES2
ZGPAT
ARFRP1
EVA1A
STK36
RNF25
ZP4
PRDM12
DLX4
ALKBH5
IGFBP2
KDM8
ZNF383
SRSF11
LRRC40
ANK2
NOXO1
GFER
CNPY2
DBX1
TLE2
SH2B1
PDHB
CCDC200
GORAB
FGF19
TMEM70
ELOC
AXDND1
RYBP
LRATD2
ERRFI1
ECM1
KIF26A
CCN1
KIF21B
WDR59
TRABD2B
EIF4H
RBPJ
HOXB1
NELFA
SLC7A5
CLDN2
PDE12
MYLK4
RGS12
SULF1
MEIS2
TEX46
KDM1A
DMBX1
DTX4
CASC3
DLL4
PRRX1
BFSP1
CLEC18C
KDM2B
MYRIP
RAI14
SPCS1
GLT8D1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BBS9
HSPA1B
SYNPO
TBC1D8
LRGUK
TMEM120B
MALRD1
BRWD1
PDE6B
CLGN
TLE4
ZNF746
JAKMIP1
DDX3X
TPRA1
TESC
TIGD1
EIF4E2
HOXB3
HOXB4
NUTM2D
GFRA3
POP5
ZCWPW1
MEPCE
NRDE2
HOXA4
CDIP1
ID1
HOXD3
IGFBP6
SOAT2
DGKZ
MRPL38
CCNDBP1
ARL14EP
CS
C12orf73
GTF3A
NRXN1
SLC7A6OS
PRMT7
SPHK2
RPL18
FAM83E
SLC10A2
USP17L20
USP17L22
CNTLN
PNKD
DAPL1
PCBP2
VOPP1
SMPDL3A
SOX21
SYBU
NCBP3
RPS10-NUDT3
RPS10
ZFHX3
PAX8
GATA3
CCDC43
FOXP2
LRIG1
ZNF341
RNF138
SFT2D2
GADD45G
SOCS3
B3GALT5
DMRT3
RNF32
ACBD6
SKOR1
ADGRL2
MFSD3
GPT
NEUROD4
RASL10B
ERCC1
WDR47
RPS26
CPVL
CHN2
DUSP2
DAAM1
MXI1
GAD2
NPAS4
SRRM3
CDH16
CALHM6
ZNF292
RARA
CATSPERG
SLC39A6
BAIAP2
C12orf42
TMEM107
HNRNPA2B1
CBX3
MUSTN1
ITIH4
VANGL2
TCHP
PKNOX2
E2F6
CHD8
TPST2
HNF1A
OR8J1
CPLX1
AP1B1
ZBTB25
ZBTB1
MYO10
CNN3
SPACA1
CDX1
LRP2
CDC42EP2
SGK3
DNAJB2
ID2
SALL1
PEX2
CLEC18B
SEMA4B
ZNF891
ZNF10
HNRNPD
CAMTA1
UGT8
EVI5
ITPRIP
RUNX1T1
RPS24
POLR3A
HHIP
KMT2A
MSX2
DHX32
MGST1
RCOR1
TRDMT1
RHBDD1
HEY1
ZNF783
FTCDNL1
KAT6A
CEP41
TUBB3
SEMA6D
PLXNB1
TBC1D15
RGL1
POLR2J3
MET
CEMP1
ARHGEF28
NEK3
ZNF367
USP17L15
YAP1
USP17L21
USP17L12
USP17L11
USP17L18
SLC25A6
HOXA2
RARB
LEFTY2
CDCA7L
HOXA3
PHOX2B
ST18
LZTS1
ID3
MSX1
DUSP6
SP5
ARID3B
NFE2
DNAJB7
TLE3
CNTN1
GATA4
MTRNR2L2
MSH3
DHFR
DSCAML1
TRIP10
GPR108
GRSF1
NR2F1
KAZALD1
ARSG
METTL24
SPATC1L
CYP26A1
FOXP1
MTRNR2L1
HOXC4
ZFHX4
MRPL34
ABHD8
TBX3
HOXC5
PAX6
RASSF2
IER3
FLOT1
NDUFS7
TCF7L2
FGR
IFI16
PKDCC
PLEKHO2
INAFM2
HOXA1
TMPPE
MBD2
GLB1
CBX4
CACNA1D
SH3BP2
RNF149
UPF3A
METTL11B
CITED2
ABLIM3
ZNF608
LYL1
KDM6B
KAT6B
HUS1
DHRS3
TMEM14A
HEXIM2
PANK4
HES5
ETFBKMT
MTRNR2L8
LIN28A
DDA1
ARID5A
ABCG2
TLE1
NEO1
STK38
ARHGAP24
KCNAB2
JAK3
PDZRN3
SP2
PARK7
CCPG1
C15orf65
FRAT2
RPS6KA1
SEC14L1
SMC6
GEN1
SASH3
C11orf24
MRS2
SLCO4C1
PHC2
ATG16L2
HOXC6
SNCG
MMRN2
NCOR2
KDM3A
GRHL3
PRDM10
UBXN10
CCDC88A
SPECC1
LYPD1
ARHGEF10L
NADK
NCOA2
FGFRL1
ENO1
PLAGL1
WDR6
KLF17
NBEAL2
BIN2
SNX1
CIAO2A
SKIV2L
NELFE
SIRT4
NKD1
EFHD2
OTX1
FAM110A
CPSF4L
ADM
TMEM104
NAT9
LPCAT3
MTMR4
REV3L
DIAPH1
NBPF1
EMP3
CCDC114
ZNF76
TRAF4
PLEC
MEF2C
USP15
SNX3
LRRN4
WNT10B
RARG
MEF2D
KMT2E
LNPEP
CABIN1
PPP1R18
RASSF5
SPG7
CDC42EP3
DENND2D
CCDC174
DIAPH3
REC8
IMPG1
LIG3
CBFA2T3
SHOX2
RSRC1
POR
ZCCHC3
ZSWIM6
NFKBIA
IQCH
AAGAB
TYRO3
ZNF414
ZDHHC1
CD38
INAVA
ING1
VAV1
HEBP2
TRERF1
BCL3
CMTR1
TUBB
RAC2
ATP23
CNOT2
LRIG3
FTL
IQGAP2
PCNA
GPAA1
EXOSC4
MEOX1
RNASEH2B
MINDY2
OTUD7B
NTRK2
PKN2
PKM
H6PD
PPIB
PDPN
RXRA
TNFRSF19
RAB11B
NDFIP2
COL23A1
MAPKAPK3
SHB
ANKRD1
SMARCD2
SMAD3
GALNT10
PLCB2
USP3
NKIRAS1
PDE4D
ADCY7
PCTP
IFRD2
PEX14
DFFA
YTHDF2
FAM120B
HMGCS1
PRDM1
ARHGAP4
CYP51A1
LRCH4
FBXO24
CFD
MRPS24
SLC35E2B
DLG2
HESX1
PXYLP1
TBRG4
ADORA2A
HIBADH
ARIH2
TXNRD1
NR1D2
RNF139
SH3TC1
CYCS
ZDHHC4
ZNF740
CSAD
RNF166
IGF2BP3
CNTN4
SP7
BNIP2
DYNLL1
MECOM
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
LTBR
DPP9
ANKMY1
ERI3
CLIC4
NR2C1
CPT1A
KCTD6
AKIRIN1
IL6R
PRSS56
SEC22B
DTNB
TTI2
ATXN1L
SLC35E2A
CYTH4
AGO1
MYEOV
FOS
PTGES3
ZFX
RBL2
HAND1
HOXB5
SRPRA
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3
PCDH11Y
FAF2
NXPH4
C12orf29
ZNF3
UPP1
CALM2
CD164
CTTN
SLC39A13
SLAMF8
TYROBP
ANKRD13D
TRMT6
MCM8
TBX2
RNF103-CHMP3
RMND5A
AHDC1
CSRNP1
SNAPC3
BAZ1B
SPATA25
LAPTM5
PRRC2A
AIF1
USP42
MYADM
NOTCH2NLA
UNC13D
STX18
SBNO2
CLTC
SEMA4D
PIP4P2
ARHGAP45
MAP2K1
MAD1L1
CXXC4
SYNJ2
ZNRD2
MTF2
KCNH2
FAM89B
EHBP1L1
RXRB
IL21R
PPCDC
MTCH1
DGAT2
CENPH
SLC43A3
SEH1L
DNAJB8
ZNF25
RNF125
H2BC5
H1-4
PHF19
RASGRP2
LYPD6B
ERLIN2
PEAK3
THRAP3
COX5A
MRPS31
NAGLU
NOTCH2NLC
MIDN
PDE1B
MAP1S
KRI1
CDKN2D
TTYH1
EPM2A
RAD50
PIKFYVE
PKNOX1
ZBTB17
SDE2
ARL4A
UROD
HECTD3
BHLHE40
NR1D1
HSD17B8
GPSM3
PSMD3
FBXO41
SMPD1
QPRT
ZNF595
RFESD
ADAM17
STRADA
WT1
CCDC88B
KEAP1
ARHGEF38
ACOT2
RWDD2A
PGM3
SCARF1
FMNL1
TMEM123
MC1R
PRKCD
MTRF1L
WTAP
BCAT2
LSM5
AVL9
MAGEF1
GRK6
CPNE5
NUBP1
CBWD5
CBWD3
NIBAN3
SERPINB1
PRKDC
MCM4
SLC39A7
PANK2
MYCBP2
ZNF318
NTAQ1
ASNS
USPL1
SLC22A2
HMGB1
H3C12
H2BC17
H2AC17
PEX3
IFNGR1
ADAT2
KRT20
ATAD3B
UBL7
SCMH1
DYNLT1
DONSON
VPS37C
C1orf159
HES7
SH3BGRL3
FXYD2
GPX4
NOTCH2
OR2L13
OR2AJ1
MAST2
GPATCH8
NGRN
MCU
SALL4
PNRC2
SACM1L
CISH
TCF4
TIGD5
EEF1D
CBWD6
BNC2
EOLA2
RER1
MORN1
ZNF436
SCAMP2
DPEP1
ARF3
OST4
CAPG
RPL17-C18orf32
RPL17
C18orf32
RUNX1
RNPEPL1
GRIP1
ARHGAP27
BUD13
KLHL25
LIX1
NIBAN2
DDX23
LGALS1
FAM227B
FABP5
DTWD1
YBX2
GABRB2
ARHGEF18
NCBP2AS2
NCBP2
SPIN1
ATAD3A
GPR176
USP21
NOTCH2NLB
KIF1C
INCA1
TAF12
KMT5A
CCDC59
PGK1
CYB5R4
CBX5
HPF1
DENND1A
TDP2
CNPY3
CNOT6
ACOT13
SCAF1
RRAS
NINJ2
SLC9A3R1
PTEN
MDC1
KLLN
RAP1GAP2
NUDT15
TMEM65
SYPL1
NANP
YY1AP1
MT2A
DAP3
C12orf65
UBE2L3
RIMBP3C
RIMBP3B
PCMT1
CDS2
PTP4A3
NMNAT1
LZIC
CEP135
GADD45A
ASB1
ARID1A
TSHZ1
TSPAN4
POLR2L
GOLIM4
SPTBN1
ATG5
APBB1IP
CACYBP
CCNL1
RNF130
GYPC
GBX1
SERTAD2
PTDSS1
MTERF3
MFN2
ZCCHC24
GSPT1
ANTKMT
EIF3D
EHD1
C21orf91
FOXD3
SNUPN
POU2F1
LTB4R
LTB4R2
LANCL2
EIF5
CIDEB
UNK
POLG
HYLS1
SREBF2
SQSTM1
TRAP1
PSMF1
HMGCL
PAM
FLI1
MTMR1