ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584302 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◣ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
SP5
RABL2A
POLR3F
DZANK1
ZNF503
MAPKAPK5
LEFTY2
CACTIN
NUP85
NME6
PSMG2
CEP76
HSPA9
IPO13
NVL
PSMD1
POLR2E
TAOK3
SUDS3
RWDD1
PHOX2B
NEUROG2
VDAC2
C19orf48
DYNC1LI2
SLC35B1
NDUFA4
EXOSC5
BCKDHA
ZNF576
IRGQ
FARSB
TSN
DCTN1
TBCK
AIMP1
VTI1B
GOSR2
UPF2
FAM187A
EFTUD2
CCDC103
RPL21
NUP205
PMAIP1
ANAPC7
REXO1
ATP5MG
NCLN
ACTR10
BLCAP
CAPRIN1
STAM
MRPS7
GGA3
SEC61B
ALG2
PNO1
HADHB
HADHA
SKP1
STAM2
MSX1
IQCG
RPL35A
DPH6
PI4KB
GRSF1
PES1
TMED1
COX7A2L
CNTN1
SRD5A1
SMC6
GEN1
PAK1IP1
C6orf52
GOLGA5
ZP4
RBKS
BABAM2
TSNAX
LYRM4
FARS2
TTC8
RBBP5
FRG2C
UBE2I
MRPS5
SART3
ISCU
PSMD12
ICE1
UFM1
TCF7L2
PCBP1
PDAP1
BUD31
PAF1
RPS12
RPS23
ATP6AP1L
SF3B3
COG4
USP1
RPS27A
CLHC1
SMC2
PROSER1
NHLRC3
FAM104A
C17orf80
ZRANB2
SELENOF
HS2ST1
SUPV3L1
VARS1
DUX4
RABGGTB
TM9SF1
EIF4ENIF1
ARHGAP10
PRRX1
PRSS56
GRIP1
HES3
ADK
AP3M1
APOM
BAG6
PIN4
NEUROG3
PTGES2
FRG2
OSGEP
APEX1
SPECC1
BICRA
XPNPEP3
ST13
NFKBIL1
DDX39B
ATP6V1G2
STK36
RNF25
HES7
OR2L13
OR2AJ1
PAX6
SIX1
COMMD1
CCT4
RPS29
LRR1
CCDC33
MESP1
OR6B2
NDUFA10
PDE6B
MSGN1
LZTS1
OAZ3
MRPL9
SUCLG1
NEUROG1
ATOH1
PDZD2
ID2
ADGRL2
H3C12
H2BC17
H2AC17
GADD45GIP1
DEFB106B
DEFB106A
OTX1
TLE3
ABLIM3
CDX1
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
GADD45G
ZGPAT
ARFRP1
EOLA2
CERS6
CR1L
ZSWIM6
MUC12
RPL7
RDH10
ZNF383
SLAMF8
SEC11C
SLC39A8
ID3
STK38
CNPY2
HOXA3
KRT20
KCNJ5
IGFBP2
SRCIN1
RXRB
HSD17B8
SLC39A7
PBX3
TMPPE
GLB1
LYPD6B
RPN1
NEBL
EIF2S3
SHMT2
CDC73
HOXA4
SP8
EBP
MRTO4
EMC1
ALDH1A2
CCDC200
PDHX
APIP
HOXB3
CLGN
HOXB4
ANKLE2
KLF17
SMPD1
KLHL25
CPSF4L
CDC42EP2
APBA1
COQ3
CDON
SCN2A
SKIL
TBX3
MSX2
GPR78
VENTX
HOXD3
CACNA1D
BNIP2
GAD2
NKD1
DKK1
GTF3C4
DDX31
USP17L20
USP17L22
PDPN
ST18
HOXA2
SNCG
MMRN2
GORAB
USP17L21
USP17L12
USP17L11
USP17L18
KDM2B
GIMAP5
CBX4
TLE2
NKX2-2
IPO8
PDE12
EYA1
MEIS3
LRATD2
PTGES3
METTL11B
ZNF746
USP17L19
PAX2
NFE2
USP17L15
FGFR2
CSTF2T
SOST
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ASIP
ALKBH5
FTL
SP7
GATA3
LRGUK
MEIS2
DMBX1
SYBU
RPS24
POLR3A
PAX8
ITGB5
ATP1A4
CCN1
TPRA1
PRUNE2
HERPUD1
MPP4
NR6A1
WASHC3
CTXN3
SPCS1
GLT8D1
UQCC2
TMEM123
CLDN9
FAM3C
TTYH1
REC8
CWC22
CPN2
DPEP1
HES1
CPVL
CHN2
CCDC85A
TMEM107
ECM2
AGO1
UNC5C
PRICKLE1
MYRIP
DSCAML1
LZTFL1
FGF2
PCBD2
KCNN2
PPM1B
EML4
HAO1
LEF1
SH2D3C
TMEM120B
RBFOX2
ABCA5
VOPP1
MSI2
DLL4
EIF2S1
ATP6V1D
MVB12A
CDK15
THEG
CDX2
FZD8
VEZT
FGD6
BNIP3
LBX1
NEUROD1
RARB
INSM1
BBS9
TPM1
DAPL1
IGFBP6
CDCA7L
DCTN3
ARID3C
C16orf91
DLX4
PDHB
RARA
DUSP6
TLE4
MYLK4
RBPJ
FOXP2
ANK2
FGF19
ARID3B
DNAJB7
SOAT2
GATA4
RGS12
TMEM70
ELOC
MALRD1
MTRNR2L2
MSH3
DHFR
MRPL38
RBBP7
TRIP10
GPR108
SMPDL3A
CCNDBP1
POP5
ERRFI1
NR2F1
KAZALD1
ARSG
KDM8
METTL24
RUNX1T1
SPATC1L
CYP26A1
FOXP1
MTRNR2L1
PRDM12
HOXC4
TRABD2B
KMT2A
ZFHX4
MRPL34
ABHD8
HOXC5
BFSP1
RASSF2
IER3
FLOT1
LPIN1
EVA1A
NDUFS7
SH2B1
NEK3
FGR
IFI16
PKDCC
HOXB1
PLEKHO2
INAFM2
HOXA1
MBD2
DBX1
SH3BP2
AXDND1
RNF149
UPF3A
SULF1
CS
CITED2
ZNF608
LYL1
RPS10-NUDT3
RPS10
KDM6B
KAT6B
HNRNPA2B1
CBX3
HUS1
DHRS3
TMEM14A
HEXIM2
PANK4
HES5
GTF3A
ETFBKMT
MTRNR2L8
TESC
LIN28A
NELFA
DDA1
HSPA1B
ARID5A
ABCG2
SRSF11
LRRC40
TLE1
RAI14
NEO1
ARHGAP24
ZFHX3
KCNAB2
JAK3
PDZRN3
NUTM2D
SP2
PARK7
CCPG1
C15orf65
TIGD1
EIF4E2
HNRNPD
FRAT2
RPS6KA1
ID1
SEC14L1
SASH3
C11orf24
C12orf73
MRS2
SLCO4C1
PHC2
ATG16L2
HOXC6
KIF21B
NCOR2
KDM3A
GRHL3
PRDM10
SLC7A5
UBXN10
TBC1D8
CCDC88A
LYPD1
BRWD1
ARHGEF10L
NADK
CATSPERG
ERCC1
NCOA2
FGFRL1
DGKZ
ENO1
PLAGL1
WDR6
NBEAL2
BIN2
SNX1
CIAO2A
SKIV2L
NELFE
SIRT4
EFHD2
FAM110A
ADM
TMEM104
NAT9
LPCAT3
MTMR4
REV3L
DIAPH1
NBPF1
EMP3
CCDC114
ZNF76
TRAF4
PLEC
MEF2C
CAMTA1
USP15
SNX3
LRRN4
WNT10B
RARG
MEF2D
KMT2E
SOX21
MXI1
LNPEP
CABIN1
PPP1R18
RASSF5
SPG7
CDC42EP3
DENND2D
CCDC174
ZNF367
DIAPH3
DDX3X
IMPG1
LIG3
CBFA2T3
SHOX2
RSRC1
POR
ZCCHC3
NFKBIA
IQCH
AAGAB
TYRO3
ZNF414
ZDHHC1
CD38
INAVA
ING1
VAV1
HEBP2
TRERF1
BCL3
CMTR1
TUBB
RAC2
ATP23
PNKD
CNOT2
LRIG3
IQGAP2
PCNA
SYNPO
POLR2J3
SPACA1
GPAA1
EXOSC4
MEOX1
RNASEH2B
LRIG1
MINDY2
OTUD7B
NTRK2
PKN2
PKM
CLDN2
H6PD
PPIB
RXRA
TNFRSF19
RAB11B
NDFIP2
COL23A1
MAPKAPK3
RYBP
SHB
ANKRD1
SMARCD2
SMAD3
GALNT10
PLCB2
USP3
NKIRAS1
PDE4D
ADCY7
PCTP
IFRD2
PEX14
DFFA
YTHDF2
FAM120B
CEP41
HMGCS1
PRDM1
ARHGAP4
CYP51A1
LRCH4
FBXO24
CFD
MRPS24
SLC35E2B
DLG2
HESX1
PXYLP1
TBRG4
ADORA2A
HIBADH
ARIH2
TXNRD1
TUBB3
NR1D2
RNF139
SH3TC1
CYCS
ZDHHC4
ZNF740
CSAD
RNF166
IGF2BP3
CNTN4
DYNLL1
MECOM
BAIAP2
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
LTBR
DPP9
ANKMY1
ERI3
CLIC4
SEMA6D
NR2C1
CPT1A
KCTD6
ZBTB25
ZBTB1
DTX4
AKIRIN1
IL6R
SEC22B
KIF26A
DTNB
TTI2
ATXN1L
SLC35E2A
CYTH4
TPST2
MYEOV
FOS
ZFX
RBL2
HAND1
HOXB5
HNF1A
SRPRA
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3
HHIP
PCDH11Y
FAF2
NXPH4
C12orf29
ZNF3
ARHGEF1
UPP1
CASC3
CALM2
ZNF341
DMRT3
CD164
CTTN
SLC39A13
TYROBP
ANKRD13D
SLC25A6
TRMT6
MCM8
TBX2
RNF103-CHMP3
RMND5A
AHDC1
CSRNP1
SNAPC3
BAZ1B
SPATA25
LAPTM5
PRRC2A
AIF1
USP42
MYADM
NOTCH2NLA
UNC13D
STX18
SLC10A2
SBNO2
CLTC
SEMA4D
PIP4P2
ARHGAP45
MAP2K1
VANGL2
MAD1L1
CXXC4
SYNJ2
ZNRD2
MTF2
KCNH2
FAM89B
EHBP1L1
IL21R
PPCDC
MTCH1
DGAT2
CENPH
SLC43A3
SEH1L
DNAJB8
ZNF25
RNF125
H2BC5
H1-4
PHF19
RASGRP2
ERLIN2
PEAK3
THRAP3
COX5A
WDR59
MRPS31
NAGLU
GFRA3
NOTCH2NLC
MIDN
PDE1B
MAP1S
EIF4H
KRI1
CDKN2D
EPM2A
MYO10
RAD50
PIKFYVE
PKNOX1
ZBTB17
KAT6A
SDE2
ARL4A
UROD
HECTD3
BHLHE40
NR1D1
GPSM3
PSMD3
FBXO41
QPRT
ZNF595
RFESD
ADAM17
SALL1
STRADA
ITPRIP
WT1
CCDC88B
KEAP1
ARHGEF38
ACOT2
RWDD2A
PGM3
SCARF1
FMNL1
MC1R
PRKCD
MTRF1L
WTAP
BCAT2
RASL10B
LSM5
AVL9
MAGEF1
GRK6
CPNE5
RCOR1
NUBP1
CBWD5
CBWD3
NIBAN3
SERPINB1
PRKDC
MCM4
PANK2
MYCBP2
ZNF318
NTAQ1
ASNS
USPL1
SLC22A2
HMGB1
PEX3
IFNGR1
ADAT2
TCHP
ATAD3B
UBL7
SCMH1
DYNLT1
DONSON
VPS37C
C1orf159
SH3BGRL3
FXYD2
GPX4
NOTCH2
MAST2
GPATCH8
NGRN
MCU
SALL4
PNRC2
SACM1L
CISH
TCF4
TIGD5
EEF1D
CBWD6
BNC2
RER1
MORN1
RGL1
ZNF436
SCAMP2
ARF3
OST4
CAPG
RPL17-C18orf32
RPL17
C18orf32
RUNX1
RNPEPL1
ARHGAP27
BUD13
LIX1
NIBAN2
DDX23
LGALS1
FAM227B
FABP5
DTWD1
YBX2
GABRB2
ARHGEF18
NCBP2AS2
NCBP2
SPIN1
ATAD3A
GPR176
USP21
NOTCH2NLB
KIF1C
INCA1
TAF12
KMT5A
CCDC59
PGK1
CYB5R4
CBX5
HPF1
DENND1A
TDP2
CNPY3
CNOT6
ACOT13
SCAF1
RRAS
JAKMIP1
NINJ2
SLC9A3R1
PTEN
MDC1
KLLN
RAP1GAP2
NUDT15
TMEM65
SYPL1
NANP
YY1AP1
MT2A
DAP3
C12orf65
UBE2L3
RIMBP3C
RIMBP3B
PCMT1
CDS2
PTP4A3
NMNAT1
LZIC
CEP135
GADD45A
ASB1
ARID1A
TSHZ1
TSPAN4
POLR2L
GOLIM4
SPTBN1
ATG5
APBB1IP
CACYBP
CCNL1
RNF130
GYPC
GBX1
SERTAD2
PTDSS1
MTERF3
MFN2
ZCCHC24
GSPT1
ANTKMT
EIF3D
EHD1
C21orf91
FOXD3
SNUPN
POU2F1
LTB4R
LTB4R2
LANCL2
EIF5
CIDEB
UNK
POLG
HYLS1
SREBF2
SQSTM1
TRAP1
PSMF1
HMGCL
PAM
FLI1
ZCWPW1
MEPCE
MTMR1
ZNF219
TKFC
SGK1
DDB1
ADAP1