ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039039 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◣ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
ZNF335
RABL2A
DYNC1LI2
PSMD1
PSMG2
CEP76
CACTIN
NME6
IPO13
MAPKAPK5
POLR3F
DZANK1
TAOK3
SUDS3
FAM187A
EFTUD2
CCDC103
NVL
NEUROG3
DPH6
VTI1B
NUP85
VDAC2
DCTN1
RPL21
C19orf48
HSPA9
TBCK
AIMP1
NUP205
NCLN
STAM
GOSR2
MRPS7
GGA3
TSNAX
RWDD1
SKP1
POLR2E
CDX2
HADHB
HADHA
STAM2
TTC8
ATP5MG
PNO1
SLC35B1
SEC61B
ALG2
ZNF576
IRGQ
MRPS5
RPS23
ATP6AP1L
SRD5A1
PAK1IP1
C6orf52
ZNF503
CDCA7L
SMC2
BLCAP
UPF2
TSN
FARSB
RBKS
BABAM2
VARS1
PDAP1
BUD31
CAPRIN1
DLX4
NEUROD1
SUPV3L1
EIF4ENIF1
REXO1
PES1
ACTR10
COX7A2L
EXOSC5
BCKDHA
ZRANB2
LYRM4
FARS2
TMED1
SELENOF
HS2ST1
GOLGA5
FGFRL1
IQCG
RPL35A
FAM104A
C17orf80
TM9SF1
FZD8
USP1
PI4KB
PSMD12
RBBP5
ICE1
MRS2
ADK
AP3M1
WDR6
NDUFA4
FRG2C
PTGES2
RPS27A
CLHC1
INSM1
PAF1
DLL4
COMMD1
CCT4
VEZT
FGD6
NEUROG1
SART3
ISCU
PDE6B
RPS12
UFM1
RABGGTB
XPNPEP3
ST13
DNAJB7
ANAPC7
OSGEP
APEX1
PCBP1
ATOH1
APOM
BAG6
PROSER1
NHLRC3
RAB11B
DUSP6
DNAJB8
NFKBIL1
DDX39B
ATP6V1G2
SF3B3
COG4
ST18
DAPL1
MYRIP
RBL2
SHB
POP5
HESX1
FOXC1
GALNT10
HES1
FRAT2
PIN4
STK36
RNF25
EIF2S3
RPS29
LRR1
ID3
TAF9
RAD17
AK6
FRG2
LPIN1
LEFTY2
ANKRD1
DUX4
DENND1A
SEC11C
PNPLA1
PMAIP1
GBX1
ARHGAP11A-SCG5
ARHGAP11A
LIG3
GADD45GIP1
EHF
CALM2
KLF17
SUCLG1
OR6B2
NDUFA10
BNIP3
TPRA1
NXPH4
ZNF664-RFLNA
ZNF664
CCDC92
CERKL
GADD45G
SKIL
UBE2I
RPL7
RDH10
TLE2
PAX8
RBPJ
PCBD2
ZNF383
NCOR2
GATA4
MSX2
MRTO4
EMC1
PDHX
APIP
TMEM70
ELOC
MBNL2
PHLDB2
ACOT2
AMOT
GORAB
NEUROG2
MAL
HSPA1B
TIGD1
EIF4E2
GTF3C4
DDX31
DTNB
COCH
NKIRAS1
NR1D2
RAB17
UPF3A
KDM6B
MLH1
EPM2AIP1
TVP23C
ALKBH5
BMP7
HCRTR1
GJA10
TMPPE
GLB1
ARHGEF38
HES3
SLC22A24
CNPY2
GSR
CDC73
RAD54L2
SYBU
RPN1
MYSM1
ZGPAT
ARFRP1
ZNF649
OAZ3
MRPL9
LYPD6B
DMBX1
AXDND1
PRUNE2
APLN
CCDC200
USP44
MBD2
ZNF592
BANP
HOXB1
C15orf61
HEY2
CPVL
CHN2
CCDC85A
TRIP10
GPR108
LDLRAD4
PKIB
SPCS1
GLT8D1
PLA1A
BICRA
ANKLE2
DSCAML1
SRSF11
LRRC40
SCAMP4
ADAT3
RAN
DUSP4
MACROH2A1
USP17L20
USP17L21
USP17L12
USP17L11
USP17L18
CABIN1
RPP25
STK38
USP17L22
FZD10
MEOX1
ZNF397
PTCH1
CLEC10A
TFAP2A
HNRNPA2B1
CBX3
GATA3
CNTN4
INKA2
OPRL1
LKAAEAR1
KIF21B
ELF3
RSPO4
NOG
ATP6V0A4
KCNK2
BAMBI
MRPL38
SNX1
CIAO2A
TBC1D8
LYPD1
PCDHAC1
FOXP2
SEC22B
DDX3X
ZCWPW1
MEPCE
PDE12
BCOR
MTRNR2L1
RPH3A
CLDN15
SLC40A1
ZNF850
RGSL1
CFAP126
HAND1
HNRNPD
JAKMIP1
OLIG3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
METTL11B
RYBP
HIC2
NFE2
DIRAS1
ARHGAP28
LRMDA
HOXA3
NCOA2
GRHL2
RBBP8NL
PLEKHA5
ANXA9
SOX14
HOXA1
LIN28A
NTAN1
SLC12A3
NDUFV2
TYRO3
STRADA
C6orf163
USP17L15
MAST2
SLC16A12
TCHP
PAH
ASCL1
IGF2
TAS2R8
TAS2R7
RARA
DLX6
ZFAND3
BTBD3
ZNF746
CYP26A1
TMEM275
SGK1
CDS1
MID1
RUNX1T1
NFIC
RNF32
CD101
TVP23B
CHPT1
FANK1
C16orf91
PDCD2
VENTX
H3-3A
ACOT1
DCLRE1C
METTL24
CEMP1
TBL1XR1
YAP1
OSCAR
NDUFA3
ZNF90
FOXF1
PXMP2
POLE
BTF3
KAZALD1
KLF6
NAGLU
LCOR
ZNF436
RIMS2
RBBP7
TRAP1
ZNF853
CXXC4
ZNF891
ZNF10
GALNT8
ZMIZ2
PCLO
ZFP37
FDFT1
KAT6B
CCDC33
ARL14EP
LIPK
PRDM12
PRDM10
TEX46
KDM1A
TENT4B
RPS10-NUDT3
RPS10
EIF4H
LEF1
SLC25A6
HOXB9
MTCH2
CHD8
EN1
OTX1
CD99L2
CCDC169-SOHLH2
CCDC169
TMEM185A
NAV2
RIMS1
PTPRE
ZNF81
CENPBD1
SPIN1
PRSS8
APBB1IP
FAM53B
OTP
KCNJ4
PTPRG
SP7
CLDN9
CCDC88C
CCNDBP1
HINT1
BAZ1A
LIX1
STRA6
CBX4
COL11A2
STON1-GTF2A1L
FAM89A
WNT3
PODXL
FAM24B
FAM120B
DLL1
TNFRSF19
PAX7
TXNRD2
COMT
FTL
AGO1
TRIM45
GOLM1
MACROD2
SUCLG2
ORMDL3
GNG4
CNOT2
ZBTB25
ZBTB1
ERI1
ALDH3A2
USP17L19
PLAGL1
RPS24
POLR3A
GYG2
DUSP12
CDX1
BCAT2
RASL10B
UPK2
NELFA
PRSS47
SHBG
FXR2
YTHDF2
GC
EVC
EVC2
SEMA3C
PKNOX1
ZNF296
GEMIN7
KIF26A
BTG1
DHRS3
SMARCA4
ZNF552
SH2B1
CITED2
SERTAD2
SYDE2
NFAM1
ZFP64
FREM1
ZNF292
ANKRD28
PARP16
CASC3
HOXB3
PRODH
LOC102724788
ARHGAP10
ZP4
HOXA4
LBX1
IGFBP2
HOXA2
ID2
RARB
BBS9
TPM1
IGFBP6
DCTN3
ARID3C
PHOX2B
TMEM120B
CCN1
LZTS1
PDHB
PRRX1
MSX1
TLE4
SP5
MYLK4
TMEM107
ANK2
FGF19
ARID3B
LRATD2
KDM2B
TLE3
CLGN
SOAT2
CNTN1
RGS12
MALRD1
MTRNR2L2
MSH3
DHFR
SMPDL3A
GRSF1
ERRFI1
NR2F1
ARSG
KDM8
HOXB4
MEIS2
CR1L
SPATC1L
FOXP1
HOXC4
TRABD2B
KMT2A
ZFHX4
MRPL34
ABHD8
TBX3
HOXC5
PAX6
BFSP1
RASSF2
IER3
FLOT1
EVA1A
NDUFS7
NEK3
TCF7L2
FGR
IFI16
PKDCC
PLEKHO2
INAFM2
DBX1
CACNA1D
SH3BP2
RNF149
SULF1
CS
ABLIM3
ZNF608
LYL1
VOPP1
HUS1
TMEM14A
HEXIM2
PANK4
HES5
GTF3A
ETFBKMT
MTRNR2L8
TESC
DDA1
ARID5A
ABCG2
TLE1
RAI14
NEO1
ARHGAP24
ZFHX3
KCNAB2
JAK3
PDZRN3
NUTM2D
SP2
PARK7
CCPG1
C15orf65
RPS6KA1
ID1
SEC14L1
SMC6
GEN1
SASH3
C11orf24
C12orf73
SLCO4C1
PHC2
ATG16L2
HOXC6
SNCG
MMRN2
HOXD3
KDM3A
GRHL3
SLC7A5
UBXN10
CCDC88A
SPECC1
BRWD1
ARHGEF10L
NADK
CATSPERG
ERCC1
DGKZ
ENO1
NBEAL2
BIN2
SKIV2L
NELFE
SIRT4
NKD1
EFHD2
FAM110A
CPSF4L
ADM
TMEM104
NAT9
LPCAT3
MTMR4
REV3L
DIAPH1
NBPF1
EMP3
CCDC114
ZNF76
TRAF4
PLEC
MEF2C
CAMTA1
USP15
SNX3
LRRN4
WNT10B
RARG
MEF2D
KMT2E
SOX21
MXI1
LNPEP
PPP1R18
RASSF5
SPG7
CDC42EP3
DENND2D
CCDC174
ZNF367
DIAPH3
REC8
IMPG1
CBFA2T3
SHOX2
RSRC1
POR
ZCCHC3
ZSWIM6
NFKBIA
IQCH
AAGAB
ZNF414
ZDHHC1
CD38
INAVA
ING1
VAV1
HEBP2
TRERF1
BCL3
CMTR1
TUBB
RAC2
ATP23
PNKD
LRIG3
IQGAP2
PCNA
SYNPO
POLR2J3
SPACA1
GPAA1
EXOSC4
RNASEH2B
LRIG1
MINDY2
OTUD7B
NTRK2
PKN2
PKM
CLDN2
H6PD
PPIB
PDPN
RXRA
NDFIP2
COL23A1
MAPKAPK3
SMARCD2
SMAD3
PLCB2
USP3
PDE4D
ADCY7
PCTP
IFRD2
PEX14
DFFA
CEP41
HMGCS1
PRDM1
ARHGAP4
CYP51A1
LRCH4
FBXO24
CFD
MRPS24
SLC35E2B
DLG2
PXYLP1
TBRG4
ADORA2A
HIBADH
ARIH2
TXNRD1
TUBB3
RNF139
SH3TC1
CYCS
ZDHHC4
ZNF740
CSAD
RNF166
IGF2BP3
BNIP2
DYNLL1
MECOM
BAIAP2
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
LTBR
DPP9
ANKMY1
ERI3
CLIC4
SEMA6D
NR2C1
CPT1A
KCTD6
DTX4
AKIRIN1
IL6R
PRSS56
TTI2
ATXN1L
SLC35E2A
CYTH4
TPST2
MYEOV
FOS
PTGES3
LRGUK
ZFX
HOXB5
HNF1A
SRPRA
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3
HHIP
PCDH11Y
FAF2
C12orf29
ZNF3
ARHGEF1
ADGRL2
UPP1
ZNF341
DMRT3
CD164
CTTN
SLC39A13
SLAMF8
TYROBP
ANKRD13D
TRMT6
MCM8
TBX2
RNF103-CHMP3
RMND5A
AHDC1
CSRNP1
SNAPC3
BAZ1B
SPATA25
LAPTM5
PRRC2A
AIF1
USP42
MYADM
NOTCH2NLA
UNC13D
STX18
CDC42EP2
SLC10A2
SBNO2
CLTC
SEMA4D
PIP4P2
ARHGAP45
MAP2K1
VANGL2
MAD1L1
SYNJ2
ZNRD2
MTF2
KCNH2
FAM89B
EHBP1L1
RXRB
IL21R
PPCDC
MTCH1
DGAT2
CENPH
SLC43A3
SEH1L
ZNF25
RNF125
H2BC5
H1-4
PHF19
RASGRP2
ERLIN2
PEAK3
THRAP3
COX5A
WDR59
MRPS31
GFRA3
NOTCH2NLC
MIDN
PDE1B
MAP1S
KRI1
CDKN2D
TTYH1
EPM2A
MYO10
RAD50
PIKFYVE
ZBTB17
KAT6A
SDE2
ARL4A
UROD
HECTD3
BHLHE40
NR1D1
HSD17B8
GPSM3
PSMD3
FBXO41
SMPD1
QPRT
ZNF595
RFESD
ADAM17
SALL1
ITPRIP
WT1
CCDC88B
KEAP1
RWDD2A
PGM3
SCARF1
FMNL1
TMEM123
MC1R
PRKCD
MTRF1L
WTAP
LSM5
AVL9
MAGEF1
GRK6
CPNE5
RCOR1
NUBP1
CBWD5
CBWD3
NIBAN3
SERPINB1
PRKDC
MCM4
GAD2
SLC39A7
PANK2
MYCBP2
ZNF318
NTAQ1
ASNS
USPL1
SLC22A2
HMGB1
H3C12
H2BC17
H2AC17
PEX3
IFNGR1
ADAT2
KRT20
ATAD3B
UBL7
SCMH1
DYNLT1
DONSON
VPS37C
C1orf159
HES7
SH3BGRL3
FXYD2
GPX4
NOTCH2
OR2L13
OR2AJ1
GPATCH8
NGRN