ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014752 | NB-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◣ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPG7
IER3
FLOT1
PLCB2
NADK
NFE2
INAVA
PRAM1
LAPTM5
NCOA2
HMGCS1
PPCDC
ZNF414
SKIL
ARHGAP4
UNC13D
ANKMY1
RNPEPL1
GRAP
CD38
MTRNR2L2
MSH3
DHFR
GRAPL
LCOR
C5AR2
RNF166
STX1A
GFOD1
NIBAN3
CXXC5
CBX4
SERPINB1
MEF2D
CCL2
HSH2D
MYRF
DHRS3
GRK6
SPATA1
GNG5
FARSA
CALR
MTRNR2L8
MIDN
SREBF2
PCNA
ARHGAP45
CDS2
DLG1
RASGRP2
SQSTM1
DZIP3
CIP2A
MBD6
DDIT3
PDE4B
CSF3R
MAP2K3
FGR
INSIG1
ARID3B
COX20
MYO1G
MYO1F
CSK
IDH1
UPF3A
ARIH2
SIRPA
P2RY2
RPS6KA1
DBP
DOT1L
KIF21B
TPPP3
CENPH
FMNL1
KRI1
CDKN2D
ZC3H12A
CCDC88B
ZCCHC24
NFKBIA
ASB2
FDFT1
NRL
FDPS
DCAF11
MKLN1
TRERF1
S100P
OLIG1
NFIC
KAT6B
SSH3
MRAS
NLRP3
TOX2
LYL1
ARHGEF2
ICAM1
BAZ1B
SULT2B1
PRKCD
PITPNM2
DENND4B
RASSF2
MYEOV
SLC25A19
GPAA1
EXOSC4
LIMK1
BBC3
C16orf54
RBM15
BCL3
SYTL1
RAB11FIP3
C11orf91
KAZALD1
DRAP1
C11orf68
ARHGEF18
CD300A
PSMD3
DNAJB1
EMP3
CCDC114
PKN1
POC1B-GALNT4
GALNT4
MSMO1
KRAS
TMC6
TMC8
KEAP1
LRPAP1
ZNF740
CSAD
SNX15
CD248
SHISAL2A
FADS3
SEC14L1
ATG16L2
S1PR2
CTBP2
INAFM2
RARG
LYST
TMEM104
NAT9
RUNX1
CCDC57
GHDC
CEBPE
CYBA
PRTN3
BHLHE40
RAB11FIP1
EMILIN2
MRPS31
RAB3D
NUP210L
ARID2
SREBF1
PPP2R2D
BIN2
SMARCD2
ADGRG5
RNASEH2B
EPM2A
TBL1XR1
HUS1
SPDYE13
NDUFA4
PIK3AP1
PACC1
VSIR
AGTRAP
SMIM20
LRMDA
TRIB1
HES1
GALNT9
PDE6B
SPATA25
ZSWIM1
CDCA7L
HMGCR
PDE12
RAC2
CLEC3B
EVL
MTRNR2L1
LGALS1
NPEPL1
H4C11
DUSP10
TCTEX1D4
BTBD19
GRK2
PTPRCAP
SLC35D1
PKM
NOL4L
SLC22A18
E2F3
SLC47A1
LTB
LST1
YARS1
S100PBP
GSE1
FERMT3
ACTL9
NR2C1
P2RX5
SETD1B
LHX3
IMPDH1
UBE2E1
MTRF1L
CFD
AP2S1
TM4SF19
FCGRT
ALOX5AP
H6PD
AP5B1
CITED4
KRT8
GYPC
CYP51A1
ARRB1
PLAU
SH2B1
ANKRD13D
RAP1GAP2
AHNAK
SPRED2
MAMSTR
CCDC174
ZNF595
ASB1
EVA1B
TNFRSF4
TNFRSF18
IGSF10
MGAT4B
TRIM8
MID1IP1
SCUBE1
MAP1S
ZNRD2
FAM89B
EHBP1L1
PLIN2
MYBPH
LMTK3
OAZ1
HSP90AB1
SQLE
HIVEP1
NINJ2
TANK
JUP
RAB37
TRIB3
ANP32E
DUS1L
GMEB2
ADGRG3
IGFBP6
SOAT2
SLC9A3R1
GPCPD1
NCF1
ZNF746
RBBP5
USP3
UPP1
GBE1
NUDT4B
SMCHD1
TYROBP
MXI1
PARP15
UROD
HECTD3
MLXIPL
RHOF
WDR43
ARL4A
CD1D
IFNGR1
PKN2
IGF2BP3
STRA6
ATF3
ZASP
SAP25
PIKFYVE
ANKRD10
NUFIP2
GPR132
PPP1R27
MCRIP1
PDP2
ADPRHL1
TPRA1
PEAK3
MAP3K8
H4C15
H4C14
RNF103-CHMP3
RMND5A
PWWP2B
TAGLN2
RCAN1
AGRP
TBC1D10C
PPP1CA
MSRB1
SMG6
UMODL1
CTTN
SLC1A5
C12orf75
SLC12A6
SLC51A
ETFBKMT
SLC16A3
GRIFIN
DENND2D
PIK3CD
SIPA1
NFIL3
TLR9
CPSF4L
RHBDF1
MPG
CTDSP1
PLEK
GTF3A
CA11
TBXA2R
SH3BP2
GPR146
PPP2R5B
SELPLG
GPR160
ICAM3
MINDY2
KLF16
RARB
PLEKHO2
ADAP1
CDK13
SH2B2
PDE8A
ADRM1
SEPTIN9
ZC3H4
C3orf86
PPIAL4F
PPIAL4E
PPIAL4D
TRAPPC5
MCEMP1
TCF3
DSCAML1
NKIRAS1
NR1D2
SH2B3
H4C9
SNX33
S1PR4
GMIP
MTRNR2L9
OPA1
GLIPR1L1
CAPS2
PDCD4
ATXN7L2
BAZ2A
BCAP31
ABCD1
LRPPRC
LDLR
RCOR2
DENND6A
GFI1
S100A2
UBALD2
CLIC1
DDAH2
PCYT1A
SCD
ZNF217
TMEM101
IQGAP2
ARID3A
AXDND1
FBXO41
ACACA
CTCF
FOXK1
EFHD2
LOC388282
ATP2A3
KCNAB2
CD82
TSPAN32
C11orf21
PCNX3
MAP3K11
PPARG
WNT10B
TXNRD1
TRPM2
TREM1
RBKS
BABAM2
GPATCH8
MVK
KBTBD2
UBC
POM121C
DIO1
SLC17A9
P2RX1
MYADM
CDK9
KLHL24
KCNIP1
LY6K
CCDC154
PPP1R18
FOS
RGPD2
RGPD1
STEAP3
PHF19
CLTC
ZDHHC17
HRH1
NCOA4
CBFA2T3
PDLIM7
NAMPT
RAPGEF1
AVPR2
SCGB1C2
MTHFR
CLCN6
NDRG2
ARHGEF40
CCDC9
SYNGR4
ATP13A2
PRNP
LZTS2
IRF2BP1
LONRF3
FGGY
MICAL1
CHPT1
EIF4A3
PLEKHA8
C1QTNF4
MPO
BPI
VPS72
TRIM11
VOPP1
VPS9D1
ICAM5
ICAM4
OGFOD2
DUSP7
TAC4
ITGB2
MTF2
EPN1
UBE2J1
TBC1D14
PMPCB
PTPN6
PTCD1
CPSF4
ATR
ZGPAT
ARFRP1
TAF1A
ANK1
B3GNTL1
LINGO1
HBP1
H4C13
H3C11
QPRT
COPS7A
TEX2
MFAP4
QRICH1
C19orf53
OAF
GALNT7
HSPH1
LPCAT3
STK35
ZNF584
ZFP36
FRA10AC1
NOG
RHOH
PLEKHG2
ADM
HIP1
STK3
PPRC1
KMT2D
TFAP2A
CAMP
BORCS7
VIPR2
OSR2
FSCN1
AMY2A
LIMD2
ZSWIM9
LIG1
PIP4P2
CPQ
NUDT15
SLC9A5
FHOD1
PLEKHA2
H4C4
GOLIM4
CPXM1
RDH12
RDH11
TNFRSF1B
MRPS15
ITPRIP
DOCK2
MYO18A
RASIP1
IZUMO1
CPNE5
PTEN
KLLN
LZTFL1
SPN
SRF
NFAM1
MAPK12
NTSR1
LRRK2
KANSL3
FER1L5
BANP
ITPRIPL2
ZNF846
DGKZ
TCAP
PNMT
RNF149
FKBP5
NEURL2
CTSA
EP400
TNFRSF10A
GTF2IRD1
ZNF76
CCDC59
FRAT1
RIOK3
EPS15
TTYH3
SNUPN
LMNA
SKIDA1
CACNA2D4
GPX4
MIDEAS
MAFG
TCIRG1
FBXO6
FCRLB
NR4A3
HSP90AA1
TNFSF14
PFKFB4
SP1
SULT6B1
CUL2
UCN2
LSG1
HOXA3
ZDHHC4
DYRK1A
BRI3BP
TMEM88
NAA38
CYB5D1
C3
IFRD2
KCNE1
DRC7
FTL
DMAP1
KLF10
MIEF1
PLXNB2
C5AR1
DUSP6
NDUFS7
ING1
MAP1LC3B2
SC5D
SPRING1
RNFT2
NIT2
TMIGD3
ADORA3
TXNDC5
UCP2
CDCA4
VDR
NFIA
LTA4H
HAPLN4
NUBP1
APBB1IP
UHRF2
UBR4
FBRSL1
GDPGP1
CIB1
FAM214B
PIM3
C15orf62
XCR1
ATXN2
INTS1
DHX33
PEX5
SBF1
AFF1
ATP11A
EVPLL
YWHAQ
UNC45A
HDDC3
INPPL1
ITGAL
CNOT2
CLIC4
SH3BGRL3
H4C12
NYX
CDC42EP4
CHD9
ZNF317
RBPJ
MFN2
TM7SF3
HSD17B7
RWDD1
KMT5A
POLG
TBL2
AHCYL2
ZYX
FAM131B
TMBIM6
TP53I11
SREK1IP1
CWC27
DNAJB2
MLEC
TPD52L2
ABHD16B
BCAT1
PPIAL4C
CCL5
PRSS57
CCNL1
PSMF1
STING1
NOTCH1
SIGLEC7
SASH3
PGLS
BCKDK
DAGLB
SLC39A11
TNFAIP2
RAB43
ENO1
SMAD3
ARHGAP27
TBP
PSMB1
COMMD4
SETDB1
SCAP
NKG7
CLDND2
FZD5
DNAJB12
MAPK8
CCL3L3
CCL3L1
CCL3
TRIM14
ADAM8
FGD3
PARP2
KDM3B
B2M
CYTH3
SLC25A15
MRPL24
FCN1
MRPS23
HMGN4
VGLL4
PHETA1
MTRNR2L10
ZNF750
FOXP1
SCAMP4
ADAT3
HPCAL1
ANKRD33B
EIF3G
OGA
DYNC1I2
VAV1
KLF1
PPIAL4H
GCDH
NSA2
GFM2
OTUD7B
MAD1L1
ERLIN2
MDM2
RAD54L2
ALDH3B1
RFFL
THEM4
PTPN7
PHLDB1
SUCNR1
PPP1R1B
SLC35E2B
CYB5R4
ZFAND3
WDR18
DLGAP4
KMT2E
LFNG
CRACR2B
PGPEP1
PSMD1
PHC2
PEX14
DFFA
RNF139
STX18
TSC22D4
NYAP1
LBR
OSM
PRDM10
PTP4A2
ARPC1B
ATP11B
ZNF350
APOM
BAG6
SLC25A18
CD63
TRIP4
MFSD8
ABHD18
THAP11
NUTF2
CENPT
GGPS1
ARID4B
PLD6
DUSP11
C2orf78
CDC42EP3
EHD1
PA2G4
GIT2
ANKRD13A
EIF1AD
BANF1
SYT7
PPP1R15A
SH3RF3
ARL8A
IPO4
MTMR4
RPL22
SH2D3A
ANPEP
PNO1
LSM5
AVL9
VAT1
RND2
ST3GAL2
TRIM38
NTN3
LNPEP
RAB20
ARL6IP4
RGS12
SUSD1
CCDC130
CXCR3
UGP2
RBM7
C11orf71
GLUL
LCP2
LRCH4
FBXO24
NMNAT1
LZIC
POU2F2
EMC8
COX4I1
SIDT2
RASA3
RASSF4
PDPR
C7orf26
STRIP1
DGKD
ERCC1
CFLAR
THRA
FBXO46
PHF12
CLDN12
ZNF503
RCOR3
TES
ZNF775
ZNF140
RIPK1
TMEM167B
GBA
KLF2
ABT1
U2SURP
RHEX
OR1D4
ARL5C
TOM1
SLC25A39
RRP12
NEU4
WT1
RNF130
PGD
DPP8
NDRG1
PRELID3B
ATP5MF-PTCD1
ATP5MF
BSDC1
SATB2
GHRL
CAST
ANAPC5
DDX23
AZIN1
CSF1R
GLIS3
LGALS9B
GPNMB
DOK7
FURIN
ZFP91
LPXN
SEMA4C
ZNF609
TMEM72
DENND5B
SEPTIN2
HDLBP
USP36
EEA1
ETV6
PRXL2B
SIRPB2
COL9A2
TRIOBP
VWA1
RBP4
PROSER1
NHLRC3
RASSF5
REPIN1
ZNF862
SYK
NEK2
RAP2A
INHBE
HIKESHI
ZNF652
FUT7
EPHA1
KDELR1
GRIN2D
DYSF
CCDC144A
CCDC146
ZNF577
SLC25A16
ARHGEF25
USP8
RPLP0
TMTC3
CEP290
MKNK2
GAS7
CSRNP1
SCAF1
RRAS
PPFIBP2
POM121
HEXA
GTF2B
PEMT
SF3A3
HMX3
LPAR2
DNAJC16
CASP9
FAAP24
CEP89
LONP2
ABCC11
NUF2
MFSD10
SKA1
WASHC2A
MEF2B
QPCT
NTNG2
GPR35
SLC41A3
IL1R1
GGH
SLC22A15
ARSG
SLC16A6
LAMP1
ARMC12
TFAM
EBAG9
DOK3
PLAUR
MRPS17
CCR5
SIRT1
UNCX
SLC3A2
NDUFAF3
DALRD3
PPP3CB
AMN1
HELZ
ONECUT3
KBTBD6
OCIAD1
CYP1A1
ABHD2
RNF168
COQ10A
DRG2
PRCC
SOD2
WTAP
MRPL4
ST3GAL1
CES1