ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039041 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◣ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
PSMD1
RABL2A
TAOK3
SUDS3
POLR3F
DZANK1
DYNC1LI2
PSMG2
CEP76
MAPKAPK5
NME6
CACTIN
IPO13
NVL
ZNF503
TBCK
AIMP1
RWDD1
HADHB
HADHA
RPL21
NCLN
VTI1B
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
FRG2C
ID2
SLC35B1
NUP205
POLR2E
STAM
HSPA9
EXOSC5
BCKDHA
TSNAX
MRPS7
GGA3
HOXA2
REXO1
STAM2
DCTN1
VDAC2
UPF2
SKP1
LYRM4
FARS2
ATP5MG
GOLGA5
SMC2
BBS9
COMMD1
CCT4
FARSB
C19orf48
SUPV3L1
PAK1IP1
C6orf52
GOSR2
PSMD12
BLCAP
RPS23
ATP6AP1L
IGFBP6
SOAT2
DPH6
VARS1
DAPL1
PES1
NDUFA4
SEC61B
ALG2
ZNF576
IRGQ
TTC8
ZRANB2
TSN
SELENOF
HS2ST1
PDE6B
TMED1
MRPS5
PNO1
TM9SF1
COX7A2L
PKDCC
RBKS
BABAM2
EIF4ENIF1
ANAPC7
USP1
IQCG
RPL35A
RBBP5
RARB
LYPD1
CAPRIN1
PI4KB
SART3
ISCU
ICE1
PDAP1
BUD31
RABGGTB
RPS27A
CLHC1
ADK
AP3M1
FAM104A
C17orf80
PROSER1
NHLRC3
XPNPEP3
ST13
DNAJB7
ACTR10
FRG2
PDE12
RBPJ
CDC42EP3
SYBU
ZFHX3
OSGEP
APEX1
LTBR
SCNN1A
DUX4
NEO1
RPS12
SLC22A2
LRRN4
PTGES2
APOM
BAG6
UFM1
CBX4
C12orf29
PTK2B
CLGN
ZNF608
PCBP1
CCNDBP1
NR2F1
CREB5
NSUN6
ARL5B
PAF1
CYP26A1
VANGL2
CITED2
SF3B3
COG4
DIAPH3
RBMS3
GABRB2
LAMA3
FOXP2
EIF2S3
ST18
TLE2
KCNIP4
METTL24
PXDNL
HEXIM2
ZGPAT
ARFRP1
MRTO4
EMC1
HBB
GADD45GIP1
PIN4
MBD2
ARHGEF38
ZNF407
SIRT4
NFKBIL1
DDX39B
ATP6V1G2
SUCLG1
GATA4
SLC30A4
OR6B2
NDUFA10
MSX2
BARHL2
TTI2
TPM1
PDK1
MYRIP
CXXC4
POP5
HOXA3
CCDC200
CABIN1
ARHGAP11A-SCG5
ARHGAP11A
BANP
HMX2
LAMB1
TMEM106B
SEMA3E
SHOX2
RSRC1
HEY2
SCMH1
CNR1
HMGCS2
TMEM107
TBX2
BNIP3
KAT6B
MET
USP44
RARA
ARHGEF10L
RPS29
LRR1
CDS1
OAZ3
MRPL9
MKRN2OS
MKRN2
HES1
PRUNE2
PDHX
APIP
CACYBP
STK36
RNF25
SMAGP
ZNF746
SEC11C
SPAG17
KDM3A
ST7
ZFHX4
RPN1
SHMT2
RPL7
RDH10
FOXP1
EIF3D
LIN28A
CDC73
DMBX1
TYRO3
HOXA4
TBC1D9
CNPY2
SYNJ2
CCDC59
ZBTB25
ZBTB1
TMC7
GFRA1
ZNF383
TXNRD1
TMEM70
ELOC
SCML4
SPRY1
TAF9
RAD17
AK6
NDUFS7
CLNK
CCDC174
FMN1
RPS24
POLR3A
ACOT2
OSGIN2
TNK2
TRIP10
GPR108
FREM2
SLC25A53
SPIN1
DAOA
PCBD2
REC8
ZNF367
GTF3C4
DDX31
LARGE1
ABLIM3
TSHZ1
NDUFB3
FAM126B
TCF7
HOXA1
FRRS1
RABGAP1L
ABI2
USP17L20
USP17L22
AGO1
RPS10-NUDT3
RPS10
SLC25A6
CCN1
LYPD6B
EPM2A
IL20
USP17L21
USP17L12
USP17L11
USP17L18
PCDH15
CCDC33
GTDC1
GORAB
LYN
TBX3
CFAP69
SNCG
MMRN2
KRT18
MTRNR2L1
ZNF827
PDZRN3
TCF4
MGP
SKIL
OTUD7B
ESRRG
ANTKMT
METRN
TNFRSF19
ANK3
ITGAV
KDM2B
MYZAP
GCOM1
PKIG
RUNX1T1
ALKBH5
MGST1
ABCB4
KRTAP23-1
ARSF
CPE
SLITRK6
GOLIM4
ATOH1
HOXB1
FGD3
CBWD5
CBWD3
ZNF507
RGS8
STX19
EMX2
RARG
ZNF395
GEMIN2
CS
RBM20
GPSM3
SCAMP2
PBX2
EOMES
TMPRSS11F
TMEM9
RPEL1
ETFBKMT
ATXN2
EYA1
SYNJ2BP-COX16
SYNJ2BP
YTHDF2
MECOM
CSNK1A1
C6orf163
C1orf105
IPMK
CISD1
DCTN3
ARID3C
CLCN3
BCAT2
IGF2BP3
POU2F1
BEND7
IL17B
SPCS1
GLT8D1
SERTAD2
ACKR3
NDST3
GGA1
NLGN1
LRRTM4
USP34
SLC19A3
GBX1
ASXL3
ARAP2
SIGLEC15
HOXC4
MRPL34
ABHD8
ID1
HOXC6
NXPH4
PDCL3
PRR13
C16orf91
SNX1
CIAO2A
TACC1
VPS33B
ERP27
KDM6B
MEOX1
IFI16
COL23A1
UBE2I
DMAC1
HAPLN1
NEFH
PRKD1
INKA2
CEP70
DIO2
USP17L15
RASSF6
SMIM32
LIX1
ELOVL6
HUS1
PEX14
DFFA
ITGB8
IMMP1L
ELP4
SLC6A4
BFSP1
ADM
RPP25
THRA
LOC389199
AFAP1
KAT6A
USP17L19
TMSB4Y
DUSP9
CBWD6
ATXN1L
DENR
SLC35F2
SALL3
DONSON
KCNN2
DHRS3
SRSF11
LRRC40
TIGD1
EIF4E2
PDE4D
PXYLP1
HNRNPA2B1
CBX3
SEMA6D
SEPTIN2
HDLBP
B3GNT5
JAKMIP1
LOC102723360
NCBP3
MYLK3
UXS1
PDHB
MEIS2
CNTN4
GADD45A
NTAN1
C2CD5
ID3
LMO4
TRIP4
CRABP2
UBL4B
TLE4
TLE3
LBR
HSPA4L
TSPAN3
GJA10
H2BC5
H1-4
MCU
SOX5
SELENOS
MEGF6
HSPA1B
RCOR3
RAI14
SPATC1L
NEUROG1
LMO1
RIMS1
SH2B1
SEH1L
CTF1
BCL7C
RNF207
SAR1B
SLC22A5
MGST2
ANXA11
KANK1
ACOT1
EBAG9
TMPPE
GLB1
DLAT
PKN2
HNRNPD
CALM2
SORBS2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SHB
NR2C1
ZBED9
CHRNA9
CABCOCO1
SLC7A7
LYPD6
SUSD4
MFSD4A
ERICH5
AP3D1
MSS51
PRDM10
POGLUT3
COLEC12
TPRA1
AKIRIN1
GPRC5A
HIP1
OTOL1
CLDN9
ADAMTSL4
TNFRSF12A
CLDN6
LHFPL2
MELTF
PRKAG2
GPC3
AKAP9
KLRC3
GRHL2
PYDC5
PRTG
DIP2C
KMT2A
APLN
SOX6
PHIP
FAAP24
CEP89
STK38
YAP1
OTUD4
OR51T1
SPATA25
NEURL2
CTSA
BCAP29
TRIM55
TCHP
SSBP2
DERA
PCLO
JMJD1C
HPDL
SULF1
STOM
CRHR2
LPCAT3
SMARCD2
SLC35E2A
SLAMF8
BNC2
TAF1A
HECTD4
ELAPOR2
SOX14
FDFT1
UBA3
ARL6IP5
TMTC3
CEP290
TMPRSS12
KANSL3
FER1L5
MACROH2A1
SFRP2
CALCRL
POLR2J3
COX5A
CPVL
CHN2
SLC48A1
PRIM1
ACY3
GPR37
RCOR1
PANK2
ZSCAN30
C9orf92
CMTR1
HOXB13
NR2C2
RNF111
ETV1
TFAP2B
MEIS1
NSUN7
NANOGP8
DYNLT1
REL
HGH1
EID2
LY6G5C
RYR2
DLG2
ACYP1
ZC2HC1C
SSRP1
P2RX3
RNASE9
TRIM16L
URGCP
CCDC102A
ZKSCAN2
URGCP-MRPS24
MINDY2
WDR26
SECISBP2L
PRXL2A
AP1B1
ZBTB7C
ARSB
MACF1
RILPL1
STATH
EML5
GCG
JCAD
FMO1
NAGLU
EIF4H
QPRT
PEX2
TRIM24
CRYAA
CRYAA2
FNDC5
ZDHHC17
RBP2
IQSEC2
BRWD1
ZBTB17
POFUT2
GIGYF1
KCNS3
MPDZ
NFE2
MYADM
UFSP1
ACHE
PARP9
DTX3L
FGD5
NEUROG2
UBE2V2
UQCC2
BNIP2
SALL4
CLK1
GAB2
TUBB
ADGRL2
MDC1
EHF
NCOA7
SKAP2
SFXN3
PDZD7
IQCB1
EAF2
MYO6
ING1
ATXN7
ZNF385B
GBP1
GTF2H5
PALLD
DNAJA2
CDK6
PNN
PRKRA
PJVK
TRAPPC6B
PPARGC1A
CD74
POF1B
MTF2
DZIP3
CIP2A
SRSF10
CABLES1
CADPS
BZW2
ACBD6
PKD2L2
RGS2
CSDC2
DSC2
TLN1
CREB3
GTF2IRD2B
BAZ2B
MIGA1
PLIN2
VEPH1
CTNNA1
SH3PXD2A
PCTP
ZNF341
CD55
NNMT
SLC5A10
MRPS28
SPAG8
HINT2
CMTR2
CMSS1
FILIP1L
ROR2
FSIP1
SLC7A2
SDR39U1
PLEKHD1
RBM7
C11orf71
IDH1
CEP295
ZASP
SAP25
SLC12A3
EXPH5
UBB
ADAMTS3
CNOT10
RAD18
NUP93
GJA1
MRPS31
SCOC
DNMBP
KCNK2
TBC1D32
NAT1
ZNF629
NOX3
CATSPERG
SOD2
WTAP
PCNX4
TK2
CKLF-CMTM1
CKLF
DNAJB5
SKIV2L
NELFE
CLTC
DNAH12
BTG1
NANP
FLVCR1
CENPS-CORT
CENPS
RPL5
IMMP2L
TMEM205
CCDC159
GATA3
LSM6
CAMK2G
PTGES3
ZNF3
CENPBD1
IFT22
TANC2
ACP4
LOC105372440
NDNF
GRAMD2B
NELFA
SPTBN1
EFEMP2
SRI
BAG2
CSF3R
ARL14EP
PHACTR2
BAG3
SLC6A12
FZD8
RXRB
NAA40
COL11A2
NIPSNAP2
SPRY3
TLX3
LSMEM1
THUMPD3
SEMA4B
PPP1R3D
FAM217B
CBWD2
RHOBTB1
TNPO3
PDE4DIP
ELOA
P3H2
FAM110A
HAND1
NTNG2
CTH
REM2
FABP5
H3-3A
ROBO3
NRDE2
JAK1
GPC6
MPPED2
CFAP20
MCF2
UNC93A
TBC1D8B
CRADD
CDKL2
HEBP2
TPCN1
WDR81
CDK14
ILF3
BATF2
RND3
LOC100287896
LIPT2
ASAH1
TRIP12
FBXO36
TEX14
TRPM7
LRP6
MDM2
PXMP2
POLE
C6orf62
ZSCAN25
CHD7
B4GALT3
SASH1
HELT
MYBPC3
NXPH2
SLC30A9
RPS3A
PKP2
TRAP1
TAS2R8
SMDT1
TAS2R7
PHETA2
NAGA
NADSYN1
DHCR7
ABCA4
TM9SF3
ANKRD1
PGK1
MTCH2
IRS2
CDKN2AIP
IRX5
CRNDE
SERPINB6
DPEP3
EDNRB
CYP51A1
TSPAN4
POLR2L
RAN
MICU2
GRWD1
SLX1B
SLX1A
BOLA2B
BOLA2
NR2F6
SULT1A4
SULT1A3
NPNT
CREG1
KIAA2012
OR6X1
MARK1
DMD
SMIM20
SPPL2A
CHD8
INTS10
ARHGEF12
MANEA
NEK2
BCAT1
USP12
FSTL5
ARID3B
TBC1D8
CEP41
CCDC169-SOHLH2
CCDC169
SUPT3H
MMAA
CCN2
SS18L1
PSMA7
EEF1E1
ZNF391
KRTAP19-1
ATP9A
RTRAF
OR5A2
SERPINF1
COA1
FAM83F
CFAP46
CAMLG
RTL10
GNB1L
APPL2
DERL2
ZNF878
STON2
LPIN1
ZFAND6
TBC1D1
ANAPC15
PRSS22
C15orf61
SLC11A2
TTK
OPA1
KIF5B
TSACC
CCT3
LYRM9
ATF6
MED27
ELMOD1
LNPEP
CNOT2
LSM8
BAMBI
NFIB
SHOC2
BBIP1
KRTAP3-1
DCLK1
IGFBP2
POLR2D
CRPPA
ZSWIM7
TTC19
TBC1D5
ELF3
AGAP11
ADIRF
DTNB
HSPE1-MOB4
HSPE1