ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039038 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◣ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
MAPKAPK5
CACTIN
POLR3F
DZANK1
NVL
NME6
PSMG2
CEP76
ZNF503
TAOK3
SUDS3
DYNC1LI2
VTI1B
IPO13
NCLN
VDAC2
HSPA9
RWDD1
NUP85
FAM187A
EFTUD2
CCDC103
EXOSC5
BCKDHA
GATA4
IMPG1
REXO1
RPL21
DCTN1
HOXA2
IFI16
SLC35B1
TBCK
AIMP1
POLR2E
NUP205
BBS9
SRD5A1
SEC61B
ALG2
STAM2
MRPS7
GGA3
ARHGEF10L
STAM
NTRK2
C19orf48
TSN
ATP5MG
GOSR2
BLCAP
PES1
UPF2
UBXN10
ACTR10
ZNF576
IRGQ
HADHB
HADHA
VARS1
SUPV3L1
HOXB3
HOXB5
MRPS5
SKP1
PSMD12
TSNAX
GOLGA5
RBBP5
PAK1IP1
C6orf52
PNO1
LYRM4
FARS2
ETFBKMT
FARSB
PCBP1
HAND1
TTC8
FAM104A
C17orf80
RPS23
ATP6AP1L
NDUFA4
SART3
ISCU
PI4KB
ERI3
RUNX1T1
SMC2
TMED1
RABGGTB
USP1
COX7A2L
FRG2C
ZRANB2
PROSER1
NHLRC3
CELF4
SF3B3
COG4
ADK
AP3M1
ANAPC7
TBX2
RBKS
BABAM2
ICE1
EIF4ENIF1
TBX3
UFM1
LRRN4
RPS12
LAPTM4B
SELENOF
HS2ST1
TM9SF1
NR2F1
CAPRIN1
XPNPEP3
ST13
MECOM
RPS27A
CLHC1
DMD
MEIS1
DPH6
PAF1
PDAP1
BUD31
IQCG
RPL35A
LIN28A
OSGEP
APEX1
NTAQ1
ELOVL6
CCN1
PLAGL1
SIRT4
SCRG1
TMEM141
APOM
BAG6
CLGN
ADAMTS8
NUBP1
VPS13A
NFKBIL1
DDX39B
ATP6V1G2
PAEP
CXXC4
HOXC4
HOXC6
OR6B2
NDUFA10
COMMD1
CCT4
DUX4
PRXL2A
ERVW-1
KDM2B
OAZ3
MRPL9
HEXIM2
PDE12
NEO1
MGST1
DIAPH3
CITED2
STK36
RNF25
PIN4
TMEM14A
LZTS1
PPP1R21
ZFHX4
SSH1
PDE6B
SUCLG1
HOXA3
KRTAP23-1
MRTFB
DMAC1
PRUNE2
NXPH2
MELK
ZNF608
UNC5C
GOLGA8T
GOLGA8K
ASPG
TMEM120B
SLC19A2
AKAP12
MEOX1
ACKR3
DCTN3
ARID3C
ZAP70
CATSPERG
GADD45A
HIP1
PTGES2
POU2F1
POP5
NIBAN1
LOC102723360
WT1
CD244
KIAA1217
FLVCR1
GBP3
PKDCC
ACVR1
TLE3
CCDC183
CNPY2
SNCG
MMRN2
FEM1B
CYP26A1
SLC48A1
MRTO4
EMC1
PLEKHF1
ARHGAP11A-SCG5
ARHGAP11A
LYPD1
HOXA4
METTL24
P2RX6
C9orf153
FRG2
SEH1L
FAM205A
ZFHX3
SCMH1
RARB
FGF7
HOXB9
GOLGA8N
GOLGA8H
ZNF3
COPS6
ZNF587B
SEC11C
EIF3D
PPFIA2
BNC2
TLE4
SHOX2
RSRC1
EYA1
TMEM14B
CNR1
R3HCC1L
TAF9
RAD17
AK6
EVPL
PACRGL
ZGPAT
ARFRP1
PDK1
PRR13
RPL7
RDH10
CDC42EP3
MXRA7
CFAP221
ZBTB18
GPR19
GTF3C4
DDX31
GPR82
RPS29
LRR1
PGPEP1L
TRPS1
TNP1
HES1
TYRO3
NT5C3A
DMBT1
TMEM9
SLC22A5
SNX16
ERCC1
SERINC3
SCHIP1
RARA
POLDIP3
FOXP2
RPS24
POLR3A
RERG
CPA1
LIX1
MXD1
DSCAML1
ZP3
TEPSIN
NDUFAF8
RNASEH2B
HOXC5
SORBS2
CFLAR
CCNDBP1
ABCC9
SLCO2B1
EMP1
TMEM107
TCF7L2
CREB5
OSBP2
COLEC12
TPM1
FSIP1
JCAD
SPIRE1
PKNOX1
SKIL
ZNF383
PPP1R3D
FAM217B
NDUFV2
TMSB4Y
RAB30
ATP1A1
MYLK3
ZNF367
FBXO34
ACY3
CDC73
SLC9A3R1
SPTBN1
CDH3
CACYBP
ID2
MEIS2
PAM
KDM3A
USP17L20
USP17L22
AKAP13
ITGA3
SOX5
RPN1
CS
SALL4
GABRB2
PEDS1-UBE2V1
PEDS1
MYPN
TTI2
GFRA3
CD96
KCNIP2
FAM72C
SRGAP2B
FAM72D
HOXA5
CYP51A1
SIGLEC15
NNMT
VTN
SARM1
TBX4
CNTN1
SMIM14
CACNA1D
SACM1L
KCTD7
PDZRN3
PDGFRA
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ASXL3
ITM2C
CCDC59
HOXA6
PLCH2
RND3
GDPD5
PMFBP1
GC
TXNRD1
GORAB
SVOPL
COPZ1
USP34
CDK15
HNRNPD
REC8
MGST2
CCDC200
IRS2
CDIN1
TLE2
HOXB8
HOXB7
TYRP1
STRA6
FOXP1
CSNK2A3
EIF2S3
HOXA1
POLR2D
TUBB
MDC1
COL5A2
GUCY1A1
VANGL2
PDHX
APIP
ENTPD4
SH3RF2
WDR82
NRP2
CEP70
TBX18
PLA2G2E
RASSF4
SLITRK6
METTL7A
ALKBH5
NPM3
FGF8
EFNA5
GADD45GIP1
CALM2
KCNIP4
C1orf105
PLN
ELAPOR2
ZNF746
SPRY1
CAPN7
EDNRB
IL6ST
IGF2BP3
KRT18
UBL4B
UNKL
C12orf29
CBX5
CRKL
PDE7A
ALG10B
CCN2
WDFY3
IL1RAPL1
SLC25A6
TENM3
NDUFB3
FAM126B
SLC25A30
SLC7A5
PPFIBP2
HSPA1B
ADRB3
FZD8
ID3
ST7
RAPGEF2
HEY2
CPPED1
DUSP9
DNAJB4
HMGCS2
SAMD11
NPHP3
DPP10
ECHDC1
SLC7A7
HAND2
CDX2
SOST
NOL4L
OTUD4
SPRED2
MEGF6
THRA
MRPL39
MRPL38
SEMA3E
NFIB
RNASE9
MPPED2
CD74
HOXB6
BRD3
SPATA25
NEURL2
CTSA
SPRR2F
PCDH15
ESRRG
KANK1
GPC3
NELL2
TNRC18
LOC100129484
SMAD7
TCF4
SEPTIN9
PRR5
HOXA9
HOXA7
ZNF644
PRR5-ARHGAP8
ETV1
DZIP3
CIP2A
MCF2
LDLRAD4
AHNAK
SMAD3
SFXN3
PDZD7
SH3BP4
RCOR1
HAPLN1
COL3A1
TMEM185A
RIPOR2
GTF2H5
LRIG3
IKZF4
PKIA
ABLIM3
FBXL4
SIPA1L1
NR2F2
CSNK1A1
IGFL2
FHL1
INPP4B
PLEK2
RAPGEF4
DCN
SHMT2
PCBD2
TNFRSF19
MPDZ
SRI
UBE2I
RPS10-NUDT3
RPS10
HMX2
SPRED1
CDH18
MSX2
PHC2
NAGLU
GRWD1
GDF11
DUSP6
BNIP2
ZYX
FAM131B
PFKFB3
CCP110
SH2B1
NRG2
LMOD1
H2BC5
H1-4
GFRA1
IL19
KRTAP13-1
FAM83F
TRIM24
LSM6
C6orf163
MCM5
NEDD4L
CSDC2
KLHL2
ARSF
FAM89A
ZSWIM6
DISP1
USP17L15
RBM20
SSBP3
CFAP69
EPN2
ATG2A
BARHL2
PGF
STARD13
IGFBP6
SOAT2
SLBP
SHLD1
PTGIS
KMT2A
ANKRD33B
SMTNL2
ALX1
XKR7
ANK3
SRGAP2
FAM72A
PSPH
CCT6A
MAML3
RAP2C
BCL11B
CDA
NKX2-5
SYBU
GPC6
PKP2
DMBX1
DST
SRRM3
ANKK1
GTF3A
CLCN3
MT1E
MYOM2
ATP2A1
FGB
RANGAP1
DLAT
RBM25
VIM
PRRT4
KRT20
SPIN1
PCDH18
PDCL3
SCOC
JADE1
SNX8
ANKS1B
DERL3
UGT2A3
USP17L21
USP17L12
USP17L11
USP17L18
LRIG1
ITPRIP
SLC30A4
MAB21L2
TAS2R8
CRY1
TAS2R9
TTC24
DNAH12
OVCH2
SYNPO
USP2
WDR26
TBC1D5
FGD5
UGT2B11
DLG2
UBE2H
RARG
YTHDF2
PYDC5
OTUD7B
ZNF341
H3C12
H2BC17
H2AC17
CBFA2T2
SNX10
SYNJ2BP-COX16
SYNJ2BP
SATB2
MID1
SVEP1
SLC18A1
RNF150
LIG3
TBC1D9
SASH1
HOXB13
GNGT1
TTLL6
NSD2
WBP4
ELF1
DTWD2
PPARG
OSR1
PDHB
KDM6B
ID1
TFAP4
ABCG2
PCNX4
ANXA11
TMED7-TICAM2
TMED7
SCARB1
AXDND1
ARAP2
KDM7A
VPS33B
SRGAP2C
FAM72B
ARHGAP28
NDUFS7
ALOX5AP
ITGAV
CCDC175
KAT6B
GOLIM4
SERTAD2
CD248
SALL3
XPR1
IDO2
SPCS1
GLT8D1
AQP1
AGO1
CLUH
EIF4A2
EXOSC8
ALG5
AGTPBP1
RAB17
ABCA4
SMYD3
NEK7
HEATR1
AADAT
GCNT1
PAQR8
EIF3A
C19orf33
CDH2
SKIV2L
NELFE
FGD3
DRAP1
C11orf68
FLRT3
MEF2C
HIBADH
TCHP
RCOR3
SKAP2
ZNF280D
IRF2BPL
SPP1
SMIM20
SCYL1
RGS5
SLC13A4
RNF207
GAS1
FANK1
KRT8
TIAM2
XPO1
BMPR2
CLDN2
NR6A1
LIN28B
ACBD6
CPN2
ST3GAL6
IL2RG
HELT
SEMA3A
IKZF3
CCDC174
UBA3
ARL6IP5
LYRM1
DCUN1D3
UTRN
JMJD1C
CHD8
NAV2
RBP2
PDE6A
ATP5MC1
SLC22A8
CMYA5
ARHGAP24
CNEP1R1
EVA1B
TMSB4X
ZNF407
CLASP2
AJUBA
SERPING1
PDCD4
DACT3
CASQ1
MTF2
PRSS47
PNN
TRAPPC6B
DPF3
CMTR1
AKIRIN1
ACYP1
ZC2HC1C
FRS2
SRCAP
LOC730183
LDB3
CTF1
BCL7C
ARID5B
PIGR
RNF125
SGK3
MAPKAP1
TRANK1
HNRNPA2B1
CBX3
ADM
PGK1
YAP1
ZBTB20
ADAMTSL4
TMEM132C
HOXB2
ATF6
CFC1
BCL9
CSRP1
FTL
MYADM
ZNF391
LRRC17
ANO5
GET4
MAD2L2
DRAXIN
TBPL2
GATA6
KAT6A
CEP85L
E2F6
MZF1
PRKCE
MACF1
ABHD12
SLC28A3
AMOTL2
THUMPD3
MEIS3
ALPK2
LIPC
ABCB4
KDM4C
PHACTR2
GLRX2
JAKMIP2
HUS1
DUSP4
REL
PLAA
IFT74
NCBP3
KCNK6
ISG15
NELFA
ARHGEF1
LDB1
FILIP1L
MFAP4
ACTB
KIAA2012
SOHLH2
POLR2J3
COL23A1
ECSIT
MAP4
QPRT
TNNT2
MYO16
KANSL3
FER1L5
RERE
ZSCAN30
NBPF9
ITGBL1
SULF1
CNOT2
RASSF10
MTRF1L
SPAG8
HINT2
UXS1
SYNJ2
ATAD2
RSC1A1
PDE4D
TMEM95
KCTD11
PPIP5K2
GIN1
RBFOX3
HIP1R
SH3BP5
DYRK1A
TMCC3
KAZN
KCNT2
CCND3
CITED4
NCOA7
BAG2
NBN
SLC26A8
MAPK14
TBPL1
KIAA2026
ZFX
MARCKS
SEC14L5
SGK1
SHB
TRIP12
FBXO36
CPVL
CHN2
EPHA3
SLC39A4
CPSF1
JAK1
ANAPC15
DIP2C
SLC18B1
ARHGDIB
ZNRF1
BEND4
NDFIP2
FABP5
SPPL2A
FSHR
CEP41
HIVEP1
DEDD
NAT1
SH3BGR
LCA5L
ZNF783
MDK
NEUROG2
NEUROG3
HES3
VEZT
FGD6
PMAIP1
ARHGAP10
ZP4
ATOH1
NEUROG1
BICRA
BNIP3
LBX1
IGFBP2
NEUROD1
INSM1
LEFTY2
DAPL1
CDCA7L
DLL4
PHOX2B
C16orf91
ANKLE2
ST18
DLX4
CCDC33
PRRX1
MSX1
SP5
TPRA1
MYLK4
RBPJ
ANK2
FGF19
ARID3B
NFE2