ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584308 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◣ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
PSMD1
NUP205
RABL2A
POLR3F
DZANK1
NME6
IPO13
RABL2B
NVL
CACTIN
RWDD1
TAOK3
SUDS3
RPL21
FARSB
C19orf48
TBCK
AIMP1
NUP85
POLR2E
HSPA9
PAK1IP1
C6orf52
VDAC2
MAPKAPK5
PES1
ATP5MG
FAM187A
EFTUD2
CCDC103
NCLN
ANAPC7
SEC61B
ALG2
MRPS7
GGA3
HADHB
HADHA
PSMG2
CEP76
GOSR2
ZRANB2
DCTN1
VTI1B
EXOSC5
BCKDHA
ZNF576
IRGQ
BLCAP
PNO1
UPF2
IQCG
RPL35A
STAM
LYRM4
FARS2
DYNC1LI2
XPNPEP3
ST13
STAM2
PI4KB
SART3
ISCU
NEUROG2
SF3B3
COG4
PCBP1
PSMD12
TSN
TMED1
SELENOF
HS2ST1
RPS27A
CLHC1
FZD8
CAPRIN1
NDUFA4
CDX2
UFM1
ACTR10
ADK
AP3M1
SRD5A1
RPS12
LBX1
SMPDL3A
VARS1
ZNF503
RBBP5
RPS23
ATP6AP1L
SMC2
SUPV3L1
TSNAX
SLC35B1
PRDM12
ERRFI1
TPM1
EVA1A
ANK2
REXO1
SKP1
TTC8
COX7A2L
PDAP1
BUD31
FGF19
RABGGTB
OSGEP
APEX1
APOM
BAG6
PROSER1
NHLRC3
C16orf91
FOXP2
DCTN3
ARID3C
ICE1
PIN4
MYO10
CCN1
LRGUK
ARHGAP11A-SCG5
ARHGAP11A
FAM104A
C17orf80
MRPS5
GOLGA5
MYLK4
DPH6
LRIG3
TMEM107
PAF1
TMEM14A
EIF4ENIF1
USP1
RBKS
BABAM2
SYNPO
SYBU
DMRT3
TMEM120B
PTGES2
HES3
IGFBP2
PDHB
MALRD1
SOX21
DBX1
DAPL1
RGS12
NEUROG3
ABLIM3
C12orf73
FOXD3
PAX8
RPL7
RDH10
BICRA
TLE4
PDZRN3
ZFHX4
MXI1
IGFBP6
SOAT2
NR2F1
RGL1
SEC11C
ABCG2
VEZT
FGD6
PHC2
KCNK16
DUX4
ARHGAP10
UBE2I
LRATD2
NFKBIL1
DDX39B
ATP6V1G2
KRT20
MEIS2
ARHGAP24
PHOX2B
SPACA1
SUCLG1
HOXA4
FRG2C
TLE1
KDM8
HES1
EIF2S3
LRIG1
GPR176
RPS29
LRR1
PCDH11Y
COMMD1
CCT4
ZNF383
SEMA6D
CEP41
STK36
RNF25
CCDC33
LMO4
MRTO4
EMC1
OR6B2
NDUFA10
ARHGEF28
REV3L
CCDC88C
NUTM2D
MNX1
TAF9
RAD17
AK6
CACNA1D
TM9SF1
ZNF608
VCAN
HHIP
RAI14
PRRX1
NEK3
B3GALT5
KDM2B
GADD45GIP1
SULF1
CHMP4C
ATOH1
METTL24
ZFX
TLE2
TEX2
STXBP5L
FHL1
WT1
CLEC18C
BFSP1
PKDCC
METTL11B
NRG2
ELMOD2
BNIP3
RPS24
POLR3A
BAIAP2
SALL1
TP53INP1
TLE3
TPO
CNPY2
RBP3
ALKBH5
FGFR2
SEC22B
PJA2
DTX4
HOXA3
CNTN4
PLEKHA5
TBX3
ASXL3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SLC7A5
TYRO3
MTMR7
TTR
LMO1
PDE6B
TNFRSF19
CETN1
CR1L
TESC
MAB21L2
TPST2
SLA
OCLN
DMBX1
HNF1A
MSX1
NPAS1
GORAB
GFRA1
SECISBP2L
TANGO6
FRG2
NEUROG1
CLDN2
PDE1B
NXPH2
TRABD2B
PDE12
RUNX1T1
DHX32
PPP1R12B
OAZ3
MRPL9
CYP26A1
FRS2
PIK3C2A
SLAMF8
NEUROD1
CCDC198
SLC14A1
HOXA2
VOPP1
CD69
GTF3C4
DDX31
HOXB3
DLX4
HOXB4
CATSPERG
PPFIBP2
RPN1
TRMT9B
GCSAM
CLGN
NCOR2
CS
TBC1D8
SLC10A2
AGMO
RARB
TCF7L2
ZNF367
CXXC4
GALNT14
SLC15A3
PANK4
HES5
NOTCH1
PPBP
HOXD3
MEF2C
CNN3
TTI2
ZCCHC13
BAZ2B
SOX6
BBS9
ALDH1A2
CPEB2
BHLHE22
SALL4
ATOH8
SNCG
MMRN2
CTXN3
HOXB1
SLC39A6
CDH16
ST8SIA3
SOST
SCHIP1
ZFHX3
HOXC4
PTGR1
CDC73
ADGRL2
ECM1
CER1
RBBP7
CAMTA1
ID1
KIF21B
ADM
PRDM13
SYTL2
ZGPAT
ARFRP1
RARA
ZDHHC1
LOC102723360
RHOB
PAM
GATA3
CHD8
TCF4
THRA
PARS2
GAD2
EPB41L5
ST18
OR5A2
PRRC2C
TMEFF2
MRPL38
JAKMIP1
CLEC18B
ABCA4
OTUD6A
AGPAT4
CBY2
PCBD2
TMCC3
DUSP6
ZBTB2
PRKCA
NXPH4
LIMK2
CCDC169-SOHLH2
CCDC169
NUP93
TMEM132C
WRAP53
TP53
RBM20
P2RY14
ID2
KMT2A
LIN28A
LIPG
ALG14
CITED2
PDPN
GJA1
WDR59
LMO3
KCNIP4
TRIM2
SASH1
TNRC6B
PDHX
APIP
ZNF746
ALOX5AP
PHACTR2
SSBP3
AJUBA
OAZ2
FLNB
PIMREG
CNTN1
CFAP69
ARSF
NEUROD4
TFDP2
MXRA7
DMRTA1
INSM1
LHX2
AXDND1
CELF4
PMFBP1
DLGAP1
NDUFB3
FAM126B
FOXP1
LRRC10B
TWIST1
HOXA1
ARMC12
PCDH18
TSPAN11
DAAM1
TAS2R8
TAS2R7
FOXB1
CCDC200
KCNN2
FAM107A
SPON1
ANKS1B
ACBD5
UTRN
TPRA1
REC8
ITFG2
FERD3L
SOCS3
LIN28B
GPC6
CCDC59
IPO11
BMP5
LZTS1
FAM120B
DLL1
FHDC1
ERCC1
IGFN1
FMO3
CDC42EP2
RPS10-NUDT3
RPS10
LAPTM4A
FABP5
SH2B1
VANGL2
POU2F1
GALNTL5
PAX3
ARID5B
CDK14
JDP2
USP17L20
USP17L21
USP17L12
USP17L11
USP17L18
SHOX2
RSRC1
SVOPL
PMAIP1
ZP4
SKIL
LEFTY2
CDCA7L
DLL4
ANKLE2
PRUNE2
ID3
SP5
RBPJ
ARID3B
NFE2
DNAJB7
GATA4
TMEM70
ELOC
MYRIP
MTRNR2L2
MSH3
DHFR
DSCAML1
TRIP10
GPR108
GADD45G
CCNDBP1
POP5
GRSF1
KAZALD1
ARSG
SPATC1L
USP17L22
MTRNR2L1
MRPL34
ABHD8
HOXC5
MSX2
PAX6
RASSF2
IER3
FLOT1
LPIN1
NDUFS7
SPCS1
GLT8D1
FGR
IFI16
PLEKHO2
INAFM2
TMPPE
MBD2
GLB1
CBX4
SH3BP2
RNF149
UPF3A
LYL1
KDM6B
KAT6B
HNRNPA2B1
CBX3
HUS1
DHRS3
HEXIM2
GTF3A
ETFBKMT
MTRNR2L8
NELFA
DDA1
HSPA1B
ARID5A
SRSF11
LRRC40
NEO1
STK38
KCNAB2
JAK3
SP2
PARK7
CCPG1
C15orf65
TIGD1
EIF4E2
HNRNPD
FRAT2
RPS6KA1
SEC14L1
SMC6
GEN1
SASH3
C11orf24
MRS2
SLCO4C1
ATG16L2
HOXC6
KDM3A
GRHL3
PRDM10
UBXN10
CCDC88A
SPECC1
LYPD1
BRWD1
ARHGEF10L
NADK
NCOA2
FGFRL1
DGKZ
ENO1
PLAGL1
WDR6
KLF17
NBEAL2
BIN2
SNX1
CIAO2A
SKIV2L
NELFE
SIRT4
NKD1
EFHD2
OTX1
FAM110A
CPSF4L
TMEM104
NAT9
LPCAT3
MTMR4
DIAPH1
NBPF1
EMP3
CCDC114
ZNF76
TRAF4
PLEC
USP15
SNX3
LRRN4
WNT10B
RARG
MEF2D
KMT2E
LNPEP
CABIN1
PPP1R18
RASSF5
SPG7
CDC42EP3
DENND2D
CCDC174
DIAPH3
DDX3X
IMPG1
LIG3
CBFA2T3
POR
ZCCHC3
ZSWIM6
NFKBIA
IQCH
AAGAB
ZNF414
CD38
INAVA
ING1
VAV1
HEBP2
TRERF1
BCL3
CMTR1
TUBB
RAC2
ATP23
PNKD
CNOT2
FTL
IQGAP2
PCNA
POLR2J3
GPAA1
EXOSC4
MEOX1
RNASEH2B
MINDY2
OTUD7B
NTRK2
PKN2
PKM
H6PD
PPIB
RXRA
RAB11B
NDFIP2
COL23A1
MAPKAPK3
RYBP
SHB
CDX1
ANKRD1
SMARCD2
SMAD3
GALNT10
PLCB2
USP3
NKIRAS1
PDE4D
ADCY7
PCTP
IFRD2
PEX14
DFFA
YTHDF2
HMGCS1
PRDM1
ARHGAP4
CYP51A1
LRCH4
FBXO24
CFD
MRPS24
SLC35E2B
DLG2
HESX1
PXYLP1
TBRG4
ADORA2A
HIBADH
ARIH2
TXNRD1
TUBB3
NR1D2
RNF139
SH3TC1
CYCS
ZDHHC4
ZNF740
CSAD
RNF166
IGF2BP3
SP7
BNIP2
DYNLL1
MECOM
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
LTBR
DPP9
ANKMY1
ERI3
CLIC4
NR2C1
CPT1A
KCTD6
ZBTB25
ZBTB1
AKIRIN1
IL6R
PRSS56
KIF26A
DTNB
ATXN1L
SLC35E2A
CYTH4
AGO1
MYEOV
FOS
PTGES3
RBL2
HAND1
HOXB5
SRPRA
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3
FAF2
C12orf29
ZNF3
ARHGEF1
UPP1
CASC3
CALM2
ZNF341
CD164
CTTN
SLC39A13
TYROBP
ANKRD13D
SLC25A6
TRMT6
MCM8
TBX2
RNF103-CHMP3
RMND5A
AHDC1
CSRNP1
SNAPC3
BAZ1B
SPATA25
LAPTM5
PRRC2A
AIF1
USP42
MYADM
NOTCH2NLA
UNC13D
STX18
SBNO2
CLTC
SEMA4D
PIP4P2
ARHGAP45
MAP2K1
MAD1L1
SYNJ2
ZNRD2
MTF2
KCNH2
FAM89B
EHBP1L1
RXRB
IL21R
PPCDC
MTCH1
DGAT2
CENPH
SLC43A3
SEH1L
DNAJB8
ZNF25
RNF125
H2BC5
H1-4
PHF19
RASGRP2
LYPD6B
ERLIN2
PEAK3
THRAP3
COX5A
MRPS31
USP17L15
NAGLU
GFRA3
NOTCH2NLC
MIDN
MAP1S
EIF4H
KRI1
CDKN2D
TTYH1
EPM2A
RAD50
PIKFYVE
PKNOX1
ZBTB17
KAT6A
SDE2
ARL4A
UROD
HECTD3
BHLHE40
NR1D1
HSD17B8
GPSM3
PSMD3
FBXO41
SMPD1
QPRT
ZNF595
RFESD
ADAM17
STRADA
ITPRIP
CCDC88B
KEAP1
ARHGEF38
ACOT2
RWDD2A
PGM3
SCARF1
FMNL1
TMEM123
CPVL
CHN2
MC1R
PRKCD
MTRF1L
WTAP
BCAT2
RASL10B
LSM5
AVL9
MAGEF1
GRK6
CPNE5
RCOR1
NUBP1
CBWD5
CBWD3
NIBAN3
SERPINB1
PRKDC
MCM4
SLC39A7
PANK2
MYCBP2
ZNF318
NTAQ1
ASNS
USPL1
SLC22A2
HMGB1
H3C12
H2BC17
H2AC17
PEX3
IFNGR1
ADAT2
TCHP
ATAD3B
UBL7
SCMH1
DYNLT1
DONSON
VPS37C
C1orf159
HES7
SH3BGRL3
FXYD2
GPX4
NOTCH2
OR2L13
OR2AJ1
MAST2
GPATCH8
NGRN
MCU
PNRC2
SACM1L
CISH
TIGD5
EEF1D
CBWD6
BNC2
EOLA2
RER1
MORN1
ZNF436
SCAMP2
DPEP1
ARF3
OST4
CAPG
RPL17-C18orf32
RPL17
C18orf32
RUNX1
RNPEPL1
GRIP1
ARHGAP27
BUD13
KLHL25
LIX1
NIBAN2
DDX23
LGALS1
FAM227B
DTWD1
YBX2
GABRB2
ARHGEF18
NCBP2AS2
NCBP2
SPIN1
ATAD3A
USP21
NOTCH2NLB