ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375366 | MV-4-11
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◣ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

NLRP12
VASP
LILRB5
LILRA6
AKR1C3
DUX4
WDFY3
FMNL3
GATA4
TMEM45B
SPATC1
FRG2C
LAMP1
TMEM39B
DENND3
NFKB2
SEMA4B
GNA15
MEF2C
PLSCR1
ADGRG1
OR10J1
XRCC5
SFTPD
ABT1
ZDHHC3
EXOSC7
AGTRAP
GNG2
KLF2
GSTA4
MTRNR2L1
CMPK2
CALCOCO1
TLR4
IL1B
FEM1A
CD40
SPDYE13
CBFA2T3
PPIAL4C
CALR3
C19orf44
SLC18A2
PGK1
ITGB2
A2M
PRSS3
RPS19
MRGPRG
MRGPRE
AXL
CXCL8
IL7R
SMPD3
STEAP4
GPBAR1
PTK2
NUDCD1
CXCL1
PDLIM2
UBXN8
BOD1
SIGLEC11
SLC12A6
NUTM1
NOP10
PSTPIP1
CCL26
NIBAN3
H4C12
H4C11
H2BC14
H2AC14
FGF6
RNF149
APOL6
SPDYE9
SPDYE8
SPDYE15
SPDYE11
ZNF221
ACTN2
NAA80
IFRD2
HYAL3
DNAJC5B
NAIP
DMWD
DMPK
FRG2
NEDD9
SUN1
H2BC15
H2AC15
CD1A
DAZAP2
DOCK8
SNX11
CBX1
GLRX
NCF2
CD1C
PEX12
AP2B1
COL8A2
IVD
ALOX15
CLEC4G
DCAF12
GBA
TMEM104
NAT9
NR3C1
H4C3
H1-6
TMEM91
B9D2
CES1
PPIAL4H
TPCN1
IQCD
MAP3K5
DDX58
LIFR
TMTC3
CEP290
CCDC200
SPDYE17
NBN
LRP3
ASGR2
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
GHRL
KBTBD6
AKR1A1
H2BU1
H2AW
CTU1
EXT1
NLRP2
PPP1R12C
BCL3
B4GALT3
GPR88
EAPP
INTS9
HMBOX1
MTMR9
RPS20
CLPB
ZNF780A
CYTH4
MS4A3
SMCO2
ZFYVE1
TMEM115
NPRL2
CYB561D2
ZNF444
HIKESHI
SH3BP2
PBK
BID
UBAP1
HLA-DOA
PIK3CB
MINDY3
SPINK8
HDGF
MRPL24
FBXW4
CYRIB
EXD1
CHP1
DYNC2H1
TASL
CTDSP1
TSNAXIP1
RANBP10
VCPIP1
C8orf44-SGK3
ZSCAN30
DNAH2
EFNB3
USP3
NDUFS7
NUF2
C10orf105
SIGLEC6
SIGLEC9
RPL36
MICOS13
HSD11B1L
PANK4
HES5
CD33
GPAA1
EXOSC4
CEBPD
RAB4B
MIA
LAMB3
SPRED2
VWA3B
NABP1
EDDM13
TRABD2A
LTB4R
LTB4R2
CIDEB
PEX3
ADAT2
RUBCNL
HPSE2
ST3GAL2
NBEAL2
CCDC12
SIGLEC5
KBTBD7
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
PAFAH2
RFX1
SUCNR1
PROS1
ARL13B
ZNF225
SLCO2B1
NEUROG1
SLC23A2
ZFYVE28
CFAP99
TESK2
MMACHC
CCDC163
PNKD
AAMP
NFATC3
CCR5
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
MITD1
BRF2
BMF
SLC1A5
TPRKB
BTRC
JAML
IPCEF1
CLCA2
TRPV4
S100Z
CMIP
LOC102724770
DGCR6
MEFV
TNFRSF10B
SST
KIF25
PLEKHM3
RAB24
PRELID1
DHRS7B
MTF2
ADGRE2
CHMP4B
PPRC1
NUDT4B
LIM2
TP53I11
H3C13
H2BC18
MRPS18C
HELQ
TMEM243
FCGR2A
GSPT1
DDX18
BAZ1A
TYROBP
NFKBID
HCST
TAF12
GAB2
RMND1
ARMT1
INPPL1
FOLR2
MS4A6A
CCDC152
MUCL1
TRIP4
PCLAF
RAB39A
PPIAL4F
PPIAL4E
PPIAL4D
INVS
ERP44
ALOX5AP
TOR1AIP2
TOR1AIP1
F11R
DHRS12
GNA11
AP1B1
AP2S1
ARHGAP35
CCAR2
C8orf58
ARHGAP25
FIGNL2
LCP1
KCTD12
PHB
KRR1
TM6SF1
PROKR1
SEPTIN9
MED23
ENPP3
CTSB
ZNF226
CCDC102A
ADGRG5
P2RY14
DISC1
UCKL1
NDFIP2
PEMT
CARD8
EHD1
RFX2
PDE6H
FRG1
KANSL3
FER1L5
RMDN2
IFI16
RAC2
IL1RN
COPS7A
DHX16
PPP1R18
NRM
BANK1
RNASE3
ZNF227
TMEM107
CTTN
LRRC37A
CSF1R
HSH2D
MTRNR2L6
PAF1
ZFP36
SLC37A2
YES1
CCDC146
GRPEL2
LMO2
ENOSF1
SNCA
KIAA0930
PPP2R2B
ARID5A
NME7
BLZF1
TBL2
TAF1B
INPP5D
CAMKK1
CCER2
ZSCAN22
POMP
EIF4G3
ANKRD63
ZCCHC4
CD82
STAP1
DNAJC10
CLEC10A
CASS4
ICAM1
ITGA4
ALDH2
ATP1B2
PRCC
CACNB4
FCGRT
IGF1
INSC
IER3
FLOT1
SIGLEC1
RD3L
ADGRE1
DCP1A
MLLT1
RASSF4
LRRC37A3
FAM227B
DTWD1
TAL1
JOSD2
ASPDH
MMP9
CHI3L2
SERPINB6
SORBS3
UTP3
WASHC4
ARHGEF12
GPR68
TXK
DUSP6
SMC6
GEN1
PLEC
PARP10
GRINA
PGBD4
EMC7
SREK1IP1
CWC27
ANKRD39
SEMA4C
AURKAIP1
HMOX1
LAT2
GATB
INTS12
GSTCD
NOTCH1
SAMSN1
MKNK1
PRRG2
NOSIP
CHST13
RYK
MTIF2
PRKCE
SH2D3A
VAV1
GALK2
COPS2
AHCYL2
RPS7
ANKRD18B
IPPK
RIPK1
VPS26A
TBC1D19
S100A8
FGGY
CA13
FRA10AC1
ULK1
SCAMP4
ADAT3
ABHD17A
TMEM154
TTC33
RASSF5
TEFM
ARPC3
TPM4
OLFML2B
ABCA9
GABPB2
MLLT11
PHC2
RUNX1
SMAD2
UBR1
ASPHD2
FBXO46
MEIOSIN
CTSG
PRR5
TMEM231
LILRA2
OBI1
RFFL
CAPG
CNDP1
DTX2
SHISA5
TREX1
TRNP1
RAB27B
GOLGA8Q
ERLIN2
SSBP2
NOD2
POLE3
C9orf43
PPP6R1
MARCO
UBE2T
PPP1R12B
SYMPK
FOXA3
TBPL1
CELF1
TEAD3
DPY19L4
PDXK
SSBP1
SF3A3
LYSMD2
RPL6
PTPN11
TNIP1
TMEM68
TGS1
CCDC149
ARHGEF3
VPS13B
NFE2
DR1
RPL5
THEMIS2
DDX1
LYRM1
PIK3CG
BSG
ZAR1L
BRCA2
LRRC71
SYT8
TNNI2
PHF12
TSSC4
FASTKD1
YIF1B
KCNK6
LCE3B
LCE3A
MPEG1
NCALD
RBBP5
DHRS4L2
ACTRT3
MYNN
GOLGA7B
IFNA21
PAQR8
SLC39A1
CREB3L4
CRTC2
WDR74
STX5
PEAK3
LSM14A
MAP1S
SLC35B4
ZNF268
BORCS7
ZC3HAV1
DHX8
SLC25A10
MRPL12
XCR1
SLC35F5
H3C3
H2BC3
ADGB
VOPP1
H4C6
H3C6
H1-3
RPS6KA1
LIPM
SCRIB
RPL18A
NDUFB7
JAK3
MRPL42
BCL2L13
RNPEP
PROB1
SPATA24
CEACAM21
SYNE3
IRF9
DMXL2
FAM228B
TP53I3
SF3B6
GTF2H2C_2
GTF2H2C
BNC2
BCAN
CSF2RB
CARD19
TRIM31
PPP1R11
POLR1H
RNF39
RPIA
ANXA2R
FAM133B
LCMT2
ADAL
ZFP64
LYN
ZNF554
TRIM35
PTK2B
SECISBP2L
SPAG9
FASLG
NSMAF
RPGRIP1L
FTO
ARHGEF18
TACC1
ALG10
RNF157
PIP4K2A
RPH3AL
TTC14
GTF2H3
EIF2B1
FAM167A
MOB1A
SLC24A1
INTS14
STK10
ZNF350
PCBP2
DPY19L3
RALB
NDFIP1
SEC14L1
ZNF56
ZBTB45
SLC27A5
PPIP5K2
GIN1
CD79A
TCTEX1D1
LPO
NDUFS2
ADAMTS4
ZNF224
MRPL48
NINJ2
PLVAP
PDE4B
CCR1
PRODH2
CUEDC1
PLAC8
DSTYK
MRPL1
ZC3HC1
EPN1
RXRA
PLCXD2
CAMK1
DPYSL2
OR1D5
USF1
TSTD1
CCDC88A
PARP2
CCNB1IP1
CDK5RAP2
ZNF595
TMEM242
IRX5
CRNDE
CCDC90B
NPY4R
NPY4R2
JRK
METTL9
CHCHD5
INO80D
FCAMR
HCK
SLC38A10
FCGBP
PLEKHA4
PPP1R15A
FUT10
PSMA8
LSG1
BRPF3
PPM1M
TWF2
SDSL
KCNQ3
TMEM212
SEC11A
TMEM229B
SCHIP1
TACO1
ACTA2
HFE
CHRNA6
NUCB2
PCM1
TTI2
TULP2
NUCB1
KLHL33
XYLT1
ZNF235
SCAMP2
SELPLG
CMKLR1
COMMD2
H3C4
H4C4
H2BC6
LILRA4
ZNF513
SNX17
EIF2B4
HUS1
ADAR
SIRT2
NFKBIB
PSMF1
MRPS23
AP3S2
CCDC9
PEX2
PIGV
ASF1B
EMILIN1
KHK
OST4
APPL2
TSC1
GFI1B
RHOH
TPK1
DCANP1
PHF2
SMG6
CAPN2
IL17RD
CAVIN2
PYCR3
GFUS
ZNF286A
ANKRD40
ZNF518A
SRXN1
SLC1A4
STX7
TFPT
PRPF31
SLC39A13
H2BC5
H1-4
ADPRH
PLA1A
RIC8B
ZNF140
LMBR1
CERS3
MIER2
CD93
CHMP7
CALM3
PPP5D1
STING1
GNB4
TIFAB
LARS1
TEX46
KDM1A
SAMD4B
GMFG
SNTB1
TMEM222
KDM6B
LPAR5
ACRBP
TCEA2
POLR2J3
MFSD10
VSIR
OLFML3
UBR2
HMGB1
USPL1
ZNF846
RBCK1
TYK2
HIVEP2
BCL2A1
NRG4
IDH3B
PDE4A
RPL37
CARD6
PRKD2
KLHL20
CPEB3
MARCHF5
GAS6
CD5L
AQR
ASAP1
MPRIP
RAB3IL1
NME1-NME2
NME1
SIRT4
OAZ3
MRPL9
SUSD3
SPOP
FCGR1A
MORF4L2
MAML2
STON2
UBE4A
HERC6
RGS12
LRRC25
PLEKHG3
NFX1
CREB3L2
LRRC8D
GOLGA8R
GTF2H2
ZNF148
BRWD1
SUPT7L
SLC4A1AP
DEFA1B
DEFA1
RASSF2
TMEM131L
OR52K2
EIF2D
MFSD14A
LGALS12
PSMA6
INTS10
ZBED4
MPG
RHBDF1
LPAR1
TNFAIP1
IFT20
SCAF1
RRAS
TMEM262
SAR1B
MCUB
ORC2
PALLD
PRKCD
GOSR1
INKA2
DDX20
INO80C
PRIM2
PLAT
ZC3H6
SIRT6
ANKRD24
UXS1
ACTR3
MKRN3
PSMD9
HPD
POLE4
TRIP12
FBXO36
PIWIL4
MRPS31
CTNNB1
FOXP1
ARHGDIB
RNASE1
N4BP2L2
TMEM41A
TRDMT1
HIBCH
KDM3A
POLDIP3
PES1
USP15
PEBP4
SEC22B
IQSEC1
TCN2
SERPINE1
PPP3CC
TMEM204
ADTRP
H4C8
MED4
GNGT2
ABI3
VAMP1
MARCHF6
APBB1IP
TAPBPL
TEX44
ESCO2
RRS1
ADHFE1
PLEK
ANKRD22
DDX23
TATDN1
NDUFB9
PTPN3
SHKBP1
SLC22A18
MALT1
PLAUR
CCNL1
PSMC1
ITPRIP
C1orf159
GPR108
CCND3
EPHB4
SLC45A4
C3
VPS50
HEPACAM2
ING4
ALG10B
H1-2
H4C7
H3C7
H2BC9
GFOD2
FAM207A
SLC44A1
ISG20
SLC22A16
TIGD6
HMGXB3
EMC4
TRIM69
LIPA
DCAF10
ARID3B
NUBP1
NUFIP2
XCL2
CWC25
VPS33A
RXFP1
THAP1
MRPL27
EME1
AOPEP
FBXW11
ITGAM
SYT15
ZNF420
ZMPSTE24
TMCO2
HIP1
TMBIM4
COX7A2
BNIP1
CRYBB1
MICAL2
MYO1A
TUBA8
COX7C
PTPN6
C12orf57
AGPAT2
GPR162
ZNF212
DRAP1
C11orf68
PSMA1
EFHB
FNTA
ASH2L
MYBPH
APOL4