ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177906 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◣ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

PAXBP1
ZMYM3
KCNIP4
CMSS1
FILIP1L
PLA2G7
BAIAP2L2
TNRC6A
NBPF1
ITPRIP
ARHGEF35
SPDYE14
SPDYE10P
SNX16
CRYBB2
ARHGEF5
MTRNR2L2
ELMOD1
MTRNR2L8
LYRM1
DCUN1D3
CLTC
KRTAP9-6
ELAVL2
SLITRK3
SLC35F3
ZNF462
TES
ITPRID2
EREG
LDB2
ERRFI1
KRTAP2-4
UBAP2L
C1orf43
RAPH1
CSAG3
COPS7B
E2F3
H2BC18
H3C13
SULT6B1
CEBPZOS
ANXA2
WASHC1
C11orf97
ACTB
FANK1
UBE2Z
SIMC1
H3C15
H3C14
ECHDC1
APPBP2
SPATA16
SUV39H2
SHTN1
CTAGE8
CTAGE4
PDLIM5
RPL8
UBC
ARFGEF1
HMGA2
IDNK
COL6A1
AREG
RAB11FIP2
SLC25A32
DCAF13
TCERG1
ANTXR1
H2BC21
H2AC20
H2AC21
HNRNPA3
DSCC1
H2BC17
H2AC17
STRIP1
YBX3
SLC35B1
SPATC1L
TOB1
STK3
BCL9
CPLX2
KRT19
FBXO11
UBR5
EGR1
IER3
EIF3F
MFSD14B
CSNK1G3
PCMTD1
FOSL1
LUZP2
MND1
NFE2L1
NCOA5
SLC25A3
CHEK1
RAB4A
ARHGAP39
CBX3
USP25
VCP
MAML1
ADAM15
SMNDC1
GALNT10
GOPC
NOTCH2NLC
SLC12A8
RMDN1
CPNE3
ZCCHC4
NOTCH2NLA
LMBR1
COMT
DTD1
UBE2V1
NSFL1C
CUL4A
PCID2
TCTE3
ERMARD
DR1
NCK1
UBE2O
AANAT
CADM2
RXFP3
ENTPD7
UBE2D1
MRPS26
ID1
TMSB10
ZFP36L1
RPL18A
ZBTB38
SLC16A5
KLLN
PTEN
HECTD3
BZW1
BRAF
CIB2
VWA2
POLR2M
EEF1A1
SLF1
KIAA0825
XPC
LSM3
TMEM71
PHF20L1
FAHD2B
DIRAS2
GABRA4
SLC5A8
KRTAP2-2
SRSF2
MFSD11
CBWD5
CBWD3
TRIB1
FH
DUSP5
FRMD3
CXCL2
SEC61A1
PDXDC1
CBWD6
LRRC58
MTHFS
MFAP3L
WDR43
FAM8A1
H2AX
CSNK2A2
ZNF280D
MALSU1
CEP55
TRIM26
CCSER1
HMGB1
ZKSCAN1
SLTM
HDLBP
RMI2
FDX1
PPP1CB
CIBAR1
TMEM43
CHCHD4
SLC30A5
FAM149A
TCF7L2
CLDND1
LRRC37A3
FAM160B1
FMNL2
TUBD1
RPS6KB1
C7orf26
RESF1
FAM120B
PHTF1
VANGL1
RECK
PARG
SCO1
ADPRM
NDUFAF6
SMC6
GEN1
OXR1
ZHX1-C8orf76
ZHX1
HERC6
FGGY
KRTAP2-3
CCDC88A
SGK3
HNF4G
RPS20
PSMC5
FTSJ3
SMARCD2
AFTPH
H2BC11
H2AC11
GRPEL1
CRPPA
ANKRD18A
EBPL
PSKH2
KRTAP10-12
NFKBIZ
DENND4A
GCFC2
EXOC6
ENTPD6
FAM221A
ZFP3
OGA
ATF1
NOMO3
NOMO2
RCN2
SLC7A5
FECH
CETN1
TTBK2
OSER1
DYNLL2
LOC100287896
LIPT2
TRRAP
HEXD
CLN5
ZNF800
WDR1
FBXO34
RAD21
MTAP
NFIB
MAEL
ILDR2
KRTAP4-5
ZFP91
RPS2
MAP11
BFSP1
LEPROTL1
FA2H
SH3BP5
CPSF6
KLHL7
H3-2
PTPRA
KITLG
GPD2
NCKAP1
AK4
UBE2J2
WDR45B
USP36
LIG3
PCLO
SLC20A1
SCYL2
DEPDC4
VPS36
SNX9
KRTAP2-1
CHMP7
POMGNT2
JMJD1C
H2BC4
H2AC6
EXT1
EMB
ARRDC4
NFRKB
LRP11
MLLT3
CTAGE15
ABRAXAS2
SRRM2
PET117
KAT14
TBC1D2B
ZDHHC3
EXOSC7
INO80D
SFT2D3
EIF3A
PRKAR1A
ZNF697
HSF1
BOP1
HOMER1
PTMA
PANX1
EPM2A
PAM
SPG7
SYBU
LOC100996750
KRTAP4-7
FAM207A
SEC13
RNASEH1
DDX59
NOCT
NXF1
IMPACT
TMEM268
RANBP9
TMX4
XYLB
ATMIN
C3orf70
DYNC1LI1
SLC7A1
MYZAP
KCNS1
GCOM1
CYREN
TMED7-TICAM2
TMED7
UHMK1
FBXL4
CLK4
LPGAT1
MAP3K21
MLYCD
NDFIP1
GRK3
EGFR
PPP1R2B
ZSCAN25
TFRC
CKAP5
ZNF124
RAD23B
RWDD3
MYO5A
DEPDC7
CACNA1E
ZNF337
DUS1L
LRRC59
CPOX
PTK2
YBX1
CKS2
APEH
SLC38A2
PTS
MIB1
TKT
ENGASE
GPRC5C
REXO1
LOC100289561
EIF4A3
KDF1
PSTK
GNAL
PIBF1
DIS3
EIF5A
INPP5F
CUL1
H3-3B
TPD52
IDH2
CST3
WASF1
CDC40
WDR4
PER2
PTDSS1
MTERF3
ANKRD18B
ITGA6
MAP3K14
FAM220A
MIDEAS
TLL2
USP10
PKP4
CCDC148
NIPAL2
MAFF
DPY19L2
STX18
ACOX3
TRMT44
MKRN2
RAB18
SOD2
WTAP
CITED2
CPT2
HDDC2
POLR2D
CNP
GCLM
SIRT5
ARHGAP31
SPTBN1
SERP1
EIF2A
ARSG
MFSD14C
PROSER1
NHLRC3
TRIM25
CEBPG
YPEL2
TRIP12
FBXO36
C5orf63
ERN1
C10orf95
TRIM39
EPB41
TIFA
NTAQ1
DSE
TSPYL4
TCL1A
SLCO6A1
LAMA2
GHITM
STK40
KDM3A
MLEC
TMEM229B
BORCS5
RABEP1
CDK17
OCIAD2
SLC25A4
BCAP29
STEAP3
PLEKHH1
DSG2
SLC12A5
LRP5
KRTAP4-12
KRTAP10-6
KANSL1
FKBP1A
CHD1L
NOTCH2NLB
RPS6
VEZF1
TAPT1
C9orf85
ABHD17B
MIF
APOLD1
SPTLC2
STRIP2
ATP2A2
REST
HTATIP2
TMEM70
B4GALT2
AMD1
API5
XPO6
AMMECR1L
PLEKHA8
GRK5
TAB2
BLCAP
PDCD5
MBTPS1
KAZALD1
PARD6B
ZBTB7C
ARHGAP29
SEPTIN4
HEXIM2
CFL1
ERI1
CUL7
PRDM2
SPEF2
MAP3K7CL
GEMIN4
TOMM34
SUPT20H
UNC79
BTBD7
VOPP1
KRTAP10-5
ANO2
PARK7
HSBP1
MCL1
SCAF4
TXN
MAP3K5
NUDT18
PDCD4
SRCIN1
FBXO43
PTPRD
ALOX5
SPHKAP
NKIRAS1
TRMT1L
SWT1
WASHC4
ADAR
ATXN7L2
SMC3
C1orf53
HESX1
APPL1
ODC1
CFLAR
NR1D2
SREBF1
ZNF441
FUCA2
ROCK1
MAGI3
LGALSL
TRIM47
PATJ
FOXD4L3
EIF2D
MCMBP
COG1
TBCD
SLC16A6
LRRCC1
KLHL9
ZFAND5
PFN1
NT5C2
NDEL1
RTKN2
CMTM7
HOXB9
LRFN1
MICALL2
ZFHX3
MALL
RAB1A
SLMAP
CDK8
KBTBD8
DNM1L
PEX3
ADAT2
DNAJC25-GNG10
DNAJC25
ELMO2
SAAL1
NPM1
SLC39A8
CCDC57
AP3M2
PKD1
GAPDH
ANKRD36C
TMEM251
MOAP1
TMEM65
CD38
TYMSOS
TYMS
CEP68
EHD4
AMOTL2
CDYL2
SERPINB9
NPY4R
SPHK2
RPL18
AGK
UBE2D3
HNRNPL
P4HB
BTF3L4
RASAL2
SLC25A36
CLK1
TPGS2
BRD3OS
NUDT4
MKI67
NUDT4B
FBXL5
ITSN2
SDCBP
PM20D2
MAP2
CASD1
DOCK5
MRAS
PITX3
ADNP2
SH3D19
MOXD1
ZNF80
PPRC1
RPL6
RPL35
ARPC5L
NOTCH2
DDX42
CCDC47
TRIP13
BRD9
PTPN11
SMIM19
SLC20A2
H2BC13
H2AC13
KCTD18
UQCRFS1
SPIDR
PTPN4
INTS6
NDUFA6
PTP4A1
XPR1
ARSB
GGCT
IMPA2
TMED3
ACTR5
ARNTL
HLA-B
PDE8B
RUBCN
RPL13
NBN
ELAC1
ANKRD46
NCOA6
TGFBR2
AEN
ADI1
FBXL13
ARMC10
SFXN1
PARD3B
CLSTN1
GALNT7
EFR3A
HSPG2
TPD52L1
KRTAP9-2
FSTL1
AKIRIN2
RCAN1
RAD54L2
CD55
UBE2L3
IQSEC3
ANKRD36B
RAN
GSTO1
PANK1
HELZ
STRN3
AP4S1
CAV2
SCN8A
BOD1
WAPL
IPO8
SNX19
SRRT
CCZ1B
TOMM40
PELI1
TXNDC15
ANXA4
PGAP2
AAK1
NCOA2
NFYC
DENND4B
EHBP1
KLF6
BTF3
DBNDD1
SLC38A10
KPNA2
PARP8
PTPRE
ARHGAP32
GNPNAT1
PCTP
TLK2
JAK1
OAT
PSEN2
BAG3
GMNC
PLAAT1
GEM
NANOS1
GAS8
INPP4A
ACADS
PSD3
HEG1
SLC25A52
RBM20
HOXB3
CTAGE6
BANP
RPS19
PRPF19
ATAD3B
PIGO
FBXW4
SZT2
MED8
RFX3
ASAP1
CMTR2
LOC100421372
HSPA14
CDNF
RAE1
SH3BGR
LCA5L
DHX15
SMARCC1
SYNCRIP
HNRNPUL2
MFSD8
ABHD18
GRB2
DEK
DDX17
FAT1
CD44
ADRB1
FBXO31
MAP1LC3B
ZNF354B
PRRC2B
AARS2
SETD4
ATPAF1
OARD1
DCUN1D4
NFYA
DHRS13
RALY
AZIN1
SETD3
CCNK
ATG16L2
TMEM74
TDRD7
GLRX2
PHF3
MET
ANXA11
POMK
DHRS4L2
STIM2
SLK
PRSS12
SORL1
ICA1
AXL
GORASP2
PIK3CA
PAFAH1B2
RNF32
MYCBP2
SMAP2
OTUD5
LINC02210-CRHR1
REEP3
NEDD4
PAG1
GTF3A
TANC2
CBX2
SEC24D
ZNF532
CASR
LEMD2
TMEM109
ZNF623
HNRNPD
DDT
EIF1
ADNP
IGSF9
PPP1CC
KMT2E
RNF145
PXK
RHOB
NMT2
MFSD14A
WWP1
CDK16
TBL2
PRNP
SMCO4
ENDOD1
DYNLT1
ZXDB
CYTL1
ADAMTS2
TMEM245
SMG5
DDX1
GATM
SPATA5L1
OTUD7B
RPL14
RTN4
NUMB
UBN2
EGLN1
COMMD10
MALT1
NOMO1
ZNF799
TESMIN
SPRED1
BTG3
NAB1
CDKN1B
RNF24
BTBD3
CXADR
ARHGAP42
TBC1D1
FZD6
KRT18
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
TSPYL5
C7orf25
TRDMT1
CCZ1
CYP51A1
THAP3
LRRC61
ACTR3C
IFNGR1
TUBA1C
CEP43
CNOT6L
PITPNC1
PLEKHF2
ICA1L
PHC1
OCLN
SLC45A3
DIMT1
TRIM35
PTK2B
PPIA
RABL2B
MTCH1
IREB2
YRDC
C1orf122
TNRC6B
FAM20B
FAM110A
PHIP
CBX8
KIAA1109
ORAI1
ROCK2
MAP10
NUDCD2
HMMR
LIMD1
ST14
MAPRE2
CSMD3
TMEM184B
MIER2
TTC36
TMEM25
HBEGF
SLC25A48
RBP1
LRP5L
CXCL14
MTMR9
SUGCT
MPLKIP
RSF1
AAMDC
MACROH2A1
RAB5A
EFHB
ETV3
TERF2IP
KARS1
NUDT15
HIVEP1
SLC39A10
USP6NL
RGPD8
RGPD5
RGPD6
SIK3
MIOS
IAH1
STIMATE-MUSTN1
STIMATE
TMEM64
RIMS2
ZNF365
FGFR4
CPXM2
CIDEA
CDH1
CTDP1
ORC2
PPP6R1
FAM3C
ATRIP
ME2
LNPK
NEURL2
CTSA
PKD2L2
NT5C
CCDC149
TRIM65
GNPDA1
ZC3H12C
RHOU
MSX1
PDLIM3
RBPMS
PTPRS
NPFFR1
KRT3
RANGAP1
RBL2
MARCHF5
CPEB3
PTCD1
CPSF4
NFATC3
KDM1A
G3BP1
MYL12B
PHAX
FOXK2
PHRF1
APTX
ATP5F1E
DNAJA1
RFX7
RMND5A
SNX14