ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637470 | MOLT-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◣ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

HHIP
CALCOCO1
UCKL1
PRCC
TCEA2
BTRC
TSNAXIP1
RANBP10
TMEM115
MMACHC
CCDC163
PKIG
AP2S1
CHMP4B
NUDCD1
IFRD2
PHF12
KBTBD7
FEM1A
CLPB
GTF2H4
PHB
SMPD3
AHCYL2
CALR
ALDH1A2
SCNM1
LYSMD1
MRPL24
GSPT1
ST3GAL2
ATP2C1
CALR3
C19orf44
BANP
WDPCP
MDH1
STAU2
KBTBD6
KANSL1
CXCR4
NPRL2
CYB561D2
HIKESHI
INTS9
HMBOX1
PI16
C1orf159
RBL1
PEMT
MICOS13
HSD11B1L
VCPIP1
C8orf44-SGK3
IQGAP2
CRTC2
BOD1
C3orf86
KMT2B
DEGS1
ZFYVE1
SLC4A2
CDK5
PPRC1
ZNF444
SHQ1
ING3
WDR74
CHCHD2
SCAF1
PNKD
AAMP
INVS
ERP44
LZTFL1
PANK4
H2AZ2
PPP1R16B
TMTC3
CEP290
PAFAH2
DCLK3
GTPBP2
MAD2L1BP
NEIL3
VPS50
HEPACAM2
DDX23
ZNF331
CD1A
TLR9
LST1
PPP1R12C
MND1
LAIR1
FXYD2
UNK
KRTAP16-1
RAB37
ABCF2
GSK3A
BNIP3L
ACTR1A
SUFU
EPHX2
ZNF225
UBR2
DSTYK
CTU1
REPIN1
AP2M1
GATB
DCAKD
NMT1
MSL2
FBXO48
APLF
FBXL19
VIPAS39
AHSA1
C12orf57
CCDC146
CCM2
GFUS
FAM222A
TIMM21
FBXO15
ZNF337
BIRC5
SLC35B4
STAU1
TLR6
ZNF821
ZNF335
LAT
CCDC114
ZNF140
KCTD9
CDCA2
LDLRAD4
WNK1
TSSC4
TNFAIP1
IFT20
HSPA13
ITGA4
MAP1LC3B2
RPGRIP1L
FTO
GZMA
PSMF1
MKRN3
PRPF40B
NTAN1
RIC8B
STK25
DFFA
POLDIP3
ELOC
TFEB
NBEAL2
PPP1R12B
TTI2
RGL4
TMEM101
FAM193A
LARS1
NUF2
TGM6
H6PD
PTK2
STAP1
FASTKD1
BICD2
SLC47A1
TFPT
PRPF31
ARHGEF3
ZFYVE19
DNAJC17
MRPL1
NME1-NME2
NME1
UBQLN4
LAMTOR2
FBXW11
THYN1
ACAD8
CAPN15
CCP110
SYMPK
FOXA3
JOSD2
N4BP2L2
ZBTB45
PLK1
RPL29
ZNF500
DHX33
HECTD1
TNFRSF4
BORCS7
RPIA
DTHD1
ARHGAP24
PHF13
DUS3L
ZGPAT
ARFRP1
SSBP1
PEX26
CCNG2
CCAR2
ZNF133
DESI2
RPS26
MX2
RFX8
UTP3
NET1
TMC8
ZNF354A
NCLN
MED23
FAM185A
WDR87
SIPA1L3
ATAD2
EPHA1
SOX6
C11orf58
FAM168A
RANGAP1
ZNF56
SNX17
EIF2B4
ZNF165
NUCB2
FBXO46
DBNDD1
ICAM2
PRRG2
NOSIP
RNASEH2C
CDK8
OR10T2
MAMSTR
MBNL1
TMEM258
FEN1
ZNF354B
TES
DNAJB4
CCDC90B
DYNC1I2
SIRT4
COPS4
MFAP4
MEN1
IPO4
SLC33A1
LYST
COX7C
FAM228B
SF3B6
ATXN7
RTTN
MED15
TMEM245
ZNF605
BRF2
CHCHD3
RALGAPA2
ORMDL3
ZNF226
DLC1
NSFL1C
ADORA2A
EIF3F
ZFYVE28
CFAP99
RETNLB
FIGNL2
LCK
WBP2
STX18
TTC13
TRAPPC3
RAB1A
NUDT13
CDK5RAP1
TRAF3IP3
CLIC1
CLEC16A
WDR24
SMO
ZNF749
DCP1A
TTC33
TMEM59
BUB1B
SVIP
USP48
CIAO2A
C19orf53
TAF3
ZNF408
ARHGAP1
TSC1
GFI1B
AURKAIP1
TRAT1
ZSCAN22
GALK2
COPS2
SELENOH
AAR2
UBC
TRIP4
PANK3
SNRPD3
GUCD1
RTEL1
ASNS
NDUFB3
FAM126B
RABAC1
TLE4
GSTA4
SNRPB
TCF3
CFAP20
AQP3
TBC1D31
TUT1
CCNI
IDNK
MYO1G
PIGU
SMARCAL1
SF3A3
MRPS18C
HELQ
TMEM102
ASXL1
TOR1AIP1
GPANK1
CSNK2B
CALM2
MCM7
AP4M1
MAF1
NUTF2
CENPT
YIPF2
TIMM29
USP30
TNPO3
TRAF7
KAT7
RPL18A
KCTD5
ATP2A3
PSMD11
HDAC9
SCRIB
MTMR9
PEX3
ADAT2
MTF2
ZNF101
RACGAP1
ZNF354C
ZMAT5
UQCR10
HEXIM1
CLDND1
ZW10
ARHGDIB
PPIP5K2
GIN1
COX16
TMEM127
CIAO1
CHRNA3
GPKOW
SLC26A11
SGSH
UBAC1
ZNF169
KRR1
ETFDH
C4orf46
C16orf91
GTPBP3
SUGP1
MAU2
GRHL3
GRAP2
SIRT2
NFKBIB
RBM6
NDUFS3
KBTBD4
HEXIM2
TMEM229B
TMEM160
ADARB1
THRAP3
AQR
NOP14
GRK4
RBBP5
LAX1
ZSWIM8
PTCRA
ZNF224
PEAK1
HMG20A
PHF23
ANTKMT
ARHGAP4
RPS7
SSH2
SMARCA2
SLA
RPS20
ZNF527
ABCB8
DOCK10
NSA2
GFM2
VKORC1
ZNF235
FDPS
REXO4
CCDC150
ALG10
MED18
OR10P1
YJU2
TACO1
HEMGN
MRPL44
ARMH3
BUB3
CTHRC1
ATP5F1D
ESCO2
PRDM1
MYLK4
SLC32A1
GTSE1
CD28
RBM28
ANKRD40
WBP1L
SMG8
ZNF343
METTL11B
ZNF26
CD3E
WDR46
PFDN6
MTBP
MRPL13
DIABLO
VPREB1
PA2G4
OSCAR
NDUFA3
H4C3
UBE3B
AOAH
TRAK2
STRADB
PPP2R5B
MARS1
ARHGAP9
NUCB1
FAM8A1
UMODL1
SNAPC3
MRPS31
CASS4
MTRF1
SERPINI1
PDCD10
CFAP410
ZSWIM9
LIG1
NOP16
HIGD2A
DEF6
RPP40
RPL23A
VRK1
MAP3K7CL
SDCCAG8
CEP170
AHCY
SOD2
PPP5D1
CALM3
WTAP
PLAAT5
RPS13
MRPS16
KIF20A
BRD8
TOMM40
RUFY3
PTPN22
CUEDC1
SLC25A19
CIC
TMEM222
DHX8
TOE1
MUTYH
TUBGCP3
CCDC88A
UTRN
INTS12
GSTCD
FAM163B
RUVBL1
SDE2
BPI
KRI1
TCF7
NIBAN3
TMEM123
UHRF2
TBX6
TARBP2
C12orf73
NEDD8-MDP1
NEDD8
GMPR2
GOLGA3
ALKBH3
AGK
NFKBIZ
DGAT1
KDM3A
PPFIBP2
WRNIP1
GPR137
SIRT6
ANKRD24
ZSCAN5A
ASAP1
LIN37
SERBP1
STARD10
GINS3
KLHL20
GTF2H2C_2
GTF2H2C
CFL1
ASIP
NDUFS7
PUS10
PEX13
APOBR
SLC7A8
PIK3CG
FNDC11
PCM1
MEF2C
CASP8
NKD1
SCN3A
CHMP7
CNPY2
SEL1L
CTDP1
RAB30
C17orf75
UBE2V1
ARHGAP45
HBP1
METTL26
C12orf43
PABPC1
PRKCI
NRDE2
MAX
ATP5MF-PTCD1
ATP5MF
EMSY
CD3D
SYNGR4
DNAJC2
ADGRE2
CNOT4
LSG1
FTL
OSBPL8
EPSTI1
MTA3
NEIL2
STING1
CTF1
NUP153
NR1H3
ACP2
FCSK
CLTC
TRAF3IP2
CYP2U1
RPL22
INO80B
FKBP5
VPS52
RPS18
TSC22D4
TMEM199
POLDIP2
SIGLECL1
BOLA1
ALG10B
SLC24A1
INTS14
EIF1AD
BANF1
OR1F1
TMEM208
LRRC29
ZNF227
TMEM41A
ZNF850
ARMC1
S100A5
ZC3HC1
SLC39A3
VPS41
RNF220
ZCCHC8
DUSP2
SLC39A8
DDX49
COPE
GABPB2
MRPL3
GTF2H2
EIF4A2
BRWD1
SPC25
ADO
SDHAF3
ING4
RPS3
H4C8
TSC2
NTHL1
RAB5C
ZMPSTE24
NELFB
SREK1IP1
CWC27
ATP5PO
UGT1A5
HSPH1
IL10RA
PALD1
SNX16
ARHGEF18
CHML
TXNDC9
EIF5B
STOML2
CALM1
HMGB2
RAB29
NUMA1
LRTOMT
SOAT2
COPS7B
PDE6D
CTNNB1
SPAG8
MRPL48
DPY19L4
ITGAL
PTPRCAP
MB
CSTF2T
ITK
ZFPL1
CDCA5
GTF3C5
OR4K15
AKIRIN2
ZNF548
ZWILCH
RPL4
TTC4
RASAL3
RPL27
ZNF652
STYK1
LETM1
KIF15
KIAA1143
AP1G1
UBB
C16orf54
ZNF189
MRPL50
PEX12
FAM207A
TRUB2
COQ4
HDAC7
GCSAML
IPPK
ZNF570
ZNF569
ARHGAP30
FBXO25
RPS3A
PES1
DMAP1
BMS1
SF3B5
KCNN3
IFT74
PLAA
PSD4
JRK
BUB1
GPR171
CLP1
FRA10AC1
NMNAT1
LZIC
MTR
TAB2
ZNF350
FIS1
ZNF184
MDC1
ZNF277
DOCK4
PSMB6
EXO1
ESPL1
UBL7
ZNF628
ZKSCAN2
LRRC1
PRSS23
TOP3B
THEMIS
CNIH4
HHEX
TOR2A
INTS4
MLEC
AMD1
CDK19
DERL1
ZSCAN20
NUP54
BRMS1L
H2AX
ZNF584
RALBP1
CDK5RAP2
ZNF230
RPL37
TNFAIP8L2
MED24
TOX
SMUG1
HEMK1
SLFN12L
TNFSF4
NOLC1
ABLIM2
SGSM3
CLDN12
ZNF420
PRAF2
MAD2L2
ERAL1
LRP6
LMNB2
CCDC174
MRPL58
PROSER1
NHLRC3
MC1R
ZNF805
RPLP2
PLCXD2
OGG1
ZCCHC4
ARL17B
ARL17A
ANAPC5
APBB1IP
GAS7
SEC11C
MRPS23
CDC14B
ZNF554
WASF1
CDC40
NR1H2
PSMC3
ARHGAP15
THOC6
HCFC1R1
PRPF4
CDC26
SCAND1
CKAP2L
H4C12
TMEM129
TACC3
VAV1
VGLL4
TATDN3
NSL1
PIGL
PBXIP1
PSMD3
ZNF45
MDM4
SEC13
ZC3H6
SLC35E2B
GNB2
KCNA2
CWC22
IPO7
HNRNPA1L2
DIPK1A
MGRN1
HSCB
CHEK2
SNRPC
SLC3A2
ZSCAN23
TBL3
ZNF773
SRRT
RFXANK
BORCS8
ZBED4
PHB2
TTC26
RCOR1
TMEM43
CHCHD4
MRPL54
GBA
APBA3
GEMIN6
SH2D6
C6orf89
VPS25
CPSF1
RAB27B
TOGARAM1
KLHL28
METTL9
NOTCH2NLC
NDUFAF1
INTS5
ACSL6
C2
EHMT2
ABLIM1
ZNF688
SESN1
CEP57L1
MITD1
ZNF473
VRK3
UTP11
LTA4H
H4C4
METTL7A
DNAAF2
QTRT2
CCDC191
SNIP1
GTF3C3
SEPTIN9
LUC7L
TMEM186
PMM2
CSRNP2
CAPN10
SEC22B
ACBD6
ZAP70
AHCTF1
DFFB
CEP104
SSR3
RNF125
S100Z
KMT2D
KMT5B
IGF1
COMMD9
EIF2D
PPP1CC
PARP2
PNPLA6
SMG5
NOTCH2NLA
SUPT7L
SLC4A1AP
FRG1
SLC25A51
ZNF407
HSD11B1
NPY
ZNF384
TERF2
SNAP47
JMJD4
PPIL3
NIF3L1
ANKRD17
TMBIM4
CD2AP
COMMD2
MYL6B
ARHGAP19
JMJD1C
ZNF37A
TPX2
TRMT1L
SWT1
SART1
ELP6
MRTO4
EMC1
NDUFA2
IK
ZBTB4
POLR2A
VPS13B
CST7
H4C15
H4C14
GALE
DPEP2
C15orf62
LTN1
MIS18A
MOB3A
IZUMO4
ENOX2
SMN2
SMN1
SLC35A3
RFX7
SLC44A1
WDR11
WDR83OS
WDR83
MFSD3
SLX4IP
CDH17
PANX3
PUM3
ZNF862
PTRHD1
CENPO
DDX1
EVI5L
SLC35A1
CSDE1
PIH1D2
NKAPD1
ZNF785
SPHK2
RPL18
HIRIP3
RAD52
CD48
TM9SF4
PPIL2
FOXP1
ZNF32
ITPR1
KBTBD8
TMED9
MRPL21
IGHMBP2
MRPL16
POGZ