ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX327759 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◣ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

IFRD2
HIKESHI
TMEM115
PHB
CALCOCO1
CALR3
C19orf44
SMPD3
TCEA2
CLPB
TMTC3
CEP290
INVS
ERP44
UCKL1
PAFAH2
PPRC1
ST3GAL2
MMACHC
CCDC163
BOD1
PNKD
AAMP
AHCYL2
SCNM1
LYSMD1
CRTC2
LARS1
ORMDL3
STAU1
CCP110
GSPT1
AP2S1
PANK4
CHMP4B
TSNAXIP1
RANBP10
PPP1R12B
GFUS
NUDCD1
KBTBD7
SYMPK
FOXA3
ZNF189
MRPL50
MRPL24
C16orf91
NTAN1
ZNF225
PPP1R12C
KBTBD6
SCRIB
TNFAIP1
IFT20
DDX23
BTRC
ZFYVE28
CFAP99
CTU1
TSSC4
TTC13
SNX17
EIF2B4
CLEC16A
C1orf159
PEMT
MED15
UBQLN4
LAMTOR2
FASTKD1
GATB
MICOS13
HSD11B1L
PHF12
GTPBP2
MAD2L1BP
SLC35B4
BOLA1
CNIH4
ZNF749
UBAC1
NUDT13
VCPIP1
C8orf44-SGK3
FEM1A
ING4
UNK
TSC2
NTHL1
TIMM21
FBXO15
SCAF1
ATP5F1D
SIRT2
NFKBIB
TMEM127
CIAO1
TFEB
TMEM59
WDR87
SIPA1L3
ZNF444
RPIA
WNK1
CCDC146
NDUFS2
ZNF56
AP2M1
NPRL2
CYB561D2
BANP
TTC33
OSCAR
NDUFA3
NOP14
GRK4
SLC4A2
CDK5
DYNC1I2
C19orf53
COX7C
PHF13
JOSD2
SMARCAL1
RPL8
TRAK2
STRADB
ZNF169
ZFYVE19
DNAJC17
ABCF2
ZFYVE1
SNX27
TBL3
CTF1
SMUG1
TRAPPC3
PRCC
RIC8B
BUB3
NFXL1
DSTYK
TMEM208
LRRC29
ELOC
STK25
ZSCAN22
THRAP3
LETM1
CCDC174
DFFA
HTRA2
TFPT
PRPF31
ING3
GTF2H4
WDPCP
MDH1
FBXW11
VPS50
HEPACAM2
USP48
ZNF337
ZNF235
CAPN15
ZNF384
TMEM102
TMEM101
GPANK1
CSNK2B
UFSP2
ZNF420
CTDP1
ZNF350
CCDC150
SOX6
C11orf58
GPKOW
AURKAIP1
DESI2
ATP5PO
ZNF37A
RPS7
CLP1
RABAC1
UBR2
SERPINI1
PDCD10
BUB1B
CNOT1
WRNIP1
LMNB2
DCAKD
NMT1
PSMD11
CCDC90B
RPGRIP1L
FTO
SDCCAG8
CEP170
ZNF747
ZNF224
SSBP1
RBM6
RAB1A
CHCHD3
NUP153
ACTR1A
SUFU
ZC3H11A
TRAF7
PEX26
ZNF133
COPS7B
PDE6D
RPS20
B3GALNT2
INTS1
ZNF230
DDX49
COPE
SEC61A1
CDK5RAP2
RPS6KB2
TIMM13
KMT2B
PRR14
MARS1
ARHGAP9
AKIRIN2
FBXO46
SLMAP
MED27
TMEM43
CHCHD4
INTS9
HMBOX1
THYN1
ACAD8
UCHL5
RO60
IPPK
GPR108
PNPLA6
ZNF554
TTC1
TOR1AIP1
KAT7
CLDND1
PSMB4
POLR2E
NCDN
KIAA0319L
CWC22
RALBP1
ZNF2
PSMD4
FBXL19
EXOSC4
MGRN1
CNOT4
ZNF484
ZNF32
PRRG2
NOSIP
ZNF354A
NCLN
SCAMP4
ADAT3
PANK3
ZNF419
RALGAPA2
ZGPAT
ARFRP1
UBL7
SPHK2
RPL18
TXNDC9
EIF5B
FBXO48
APLF
FAM193A
MXI1
ZCCHC4
FDPS
PA2G4
ZNF227
SEC11C
RANGAP1
CIAO2A
VIPAS39
AHSA1
TMEM160
PHF23
ZNF547
TRAPPC2B
MED11
STK17A
ENOX2
WAPL
BICD2
LEMD2
ZNF527
RPS27
MAF1
RAB5C
ZCCHC8
PHB2
VPS4B
EXOC4
LUC7L
RPS3
MAX
ZNF140
UTP11
ZNF17
VAPA
CRK
ZNF226
INO80B
TBX6
TMEM69
GPBP1L1
ZW10
RAB29
MRPL20
FAM185A
SLC25A19
COMMD9
PTBP1
ZNF805
NARS1
LTA4H
WDR46
PFDN6
CDK8
THOC6
HCFC1R1
ZNF862
RPL18A
C1orf109
SCYL3
CDC25C
FAM53C
DGAT1
AQR
LIN37
PSMD2
ASXL1
GINS3
DDX47
RACGAP1
PCM1
ZNF343
CXXC1
PGBD4
EMC7
RPL23A
RAB30
METTL26
NFKBIL1
ATP6V1G2
NDUFB5
MRPL47
GPR137
METTL3
ZNF773
SNRPE
WBP2
IGSF8
CIAO3
COPS8
OPA1
SSR2
CAND1
GID4
ATPAF2
CFL1
PIGU
SSR3
RPS26
BIRC5
KATNB1
CNOT6
TMEM186
PMM2
ZNF277
DOCK4
MORF4L1
PSMC4
MITF
ZMAT5
UQCR10
ABRAXAS2
AHCTF1
ZNF26
DUS3L
CCAR2
PES1
RPL34
USP31
RBL1
TOR2A
TMEM94
DPH2
SEPTIN9
PPP1R13L
POLR1G
TRUB1
WDR53
FBXO45
EIF2S2
TERF2
CLPP
WIZ
FAM228B
RPS13
SF3B6
PSMB6
USP35
KCTD21
BDP1
TPGS1
L3MBTL2
VRK1
DPM3
ZNF451
ZSCAN5A
TMEM245
ZNF628
THAP1
CDK9
ZNF436
RAB7A
CAPN10
DPP9
TRABD
HSPA13
ZNF584
ZNF586
OAZ3
MRPL9
ZNF500
RNASEH2C
SUCLG1
RWDD1
NOLC1
RETSAT
DOHH
SESN1
CEP57L1
MED23
PRKCI
SYPL1
ZNF776
HSP90B1
NOP53
CWC25
GEMIN6
FCSK
ABCC5
EIF1B
NUP205
B4GALT7
ZNF585A
RAD51AP2
SHLD1
DCP1A
SYNGR4
TMEM199
POLDIP2
RTEL1
FBXL18
NUF2
ZNF25
TRMT1L
SWT1
BABAM1
POLRMT
ZBTB7A
RPL12
LRSAM1
KHDC4
CSRNP2
AKT1S1
TBC1D17
QTRT2
CCDC191
PRKCSH
CCDC151
BOD1L1
SNAPIN
ZNF764
GFM1
CARS1
KPTN
PPP6C
SUGP1
MAU2
CFAP410
ACLY
LSG1
CNPY2
TOR1A
RPP40
GGPS1
ARID4B
UBE2Q1
SH2D6
TOMM22
KBTBD8
C12orf43
CCDC124
XPOT
TRMT2A
RANBP1
ZNF599
IPO8
SCAMP3
ZSWIM9
LIG1
MRPL54
APBA3
MED24
ZNF317
SF3A3
DNAJC28
ZNF416
FAM222A
UBE2V1
TMEM33
DCAF1
ZNF221
ELP6
RBBP5
SKIV2L
NELFE
RPL37
ZNF567
ZNF548
RBL2
KCTD5
RAB3C
SEL1L
HIRIP3
SLC33A1
SLX1B
SLX1A
BOLA2B
BOLA2
TSN
TMEM109
UBA52
SMN2
SMN1
CCNT2
ZNF446
ATP5MF-PTCD1
ATP5MF
INTS4
NME1-NME2
NME1
ADSS2
TMEM230
ZNF605
COG2
BET1
TMED9
ZBTB45
ILF3
VEZT
FGD6
STRN
TUT1
GALM
NUTF2
CENPT
GSK3A
BOLA2-SMG1P6
ARMH3
YIPF2
TIMM29
CMPK1
GALK2
COPS2
ZNF180
MACC1
CHCHD6
SMIM13
WASF1
CDC40
IPO7
FBXO38
PPP2R5B
OSBPL11
SLC38A9
FAM149B1
ECD
FAM168A
NDUFS7
CCDC117
SERP1
EIF2A
ZNF268
MEN1
SNRPB2
EIF3C
EIF3CL
SETMAR
ZDHHC16
EXOSC1
NUMA1
LRTOMT
SETDB1
NKIRAS1
RPL15
SASS6
REXO1
PRAF2
ZNF45
ZNF550
NCBP2AS2
NCBP2
CCDC77
CACTIN
THAP4
ATG4B
PRPF6
EIF3F
PRPF4
CDC26
YJU2
C15orf40
TSACC
CCT3
TM9SF4
APH1A
RPS3A
SKP2
LMBRD2
TXNL4B
DHX38
BRIX1
DNAJC11
DAZAP1
CLINT1
WDR18
COPS7A
RAB8B
NR6A1
YY1AP1
DAP3
ESCO2
WDTC1
TIMM22
MVB12A
ZNF304
SH2B1
TUFM
MTR
DEDD
DARS2
CENPL
DNM1L
SDF4
B3GALT6
ATP13A1
UBA1
NAA38
CYB5D1
ZC3H10
ADO
IFRD1
SF3B2
SHPK
CTNS
POLR2J3
GPT2
EIF3D
JRK
LRRC47
NSA2
GFM2
SART1
NMNAT1
LZIC
TOGARAM1
KLHL28
AP2B1
DHX8
VKORC1
VAMP7
ZNF614
AKAP8
POMZP3
TSPAN4
POLR2L
UFD1
CDC45
SZRD1
RPS19
NOP16
HIGD2A
PNISR
ZNF211
ZNF721
PIGG
ZNF417
PGAM1
PEX12
RBM41
DHX33
PSMD10
ATG4A
TSNAX
MRPS15
ZNF155
SUPT5H
GPS2
KNSTRN
HEXIM2
MRPS16
DPM2
PRPSAP1
TMEM147
PSMD3
PCNX3
TSNARE1
MAP3K11
IPO13
SLC39A13
ARHGEF1
ZNF530
RNASEH2A
LRPAP1
STX10
IER2
MAMSTR
NR1H3
ACP2
UBE4A
N4BP2L2
CACYBP
ZSCAN32
ZNF174
PSMA2
MRPL32
PPIP5K2
GIN1
SAP30
CEP350
PUS3
DDX25
PPP1R11
UBXN6
ZNF324B
ALG10B
ZNF165
HSPH1
CDCA8
CCNL1
TRUB2
COQ4
TTLL11
METTL18
C1orf112
UCK1
NEDD8-MDP1
NEDD8
GMPR2
NAPB
ZNF79
CUEDC2
UBE2N
HSCB
CHEK2
PARK7
WASHC3
MIA3
SNIP1
SLC37A3
PSMC5
FTSJ3
STX16
CDC34
ALG10
CTNNBL1
MRPL21
IGHMBP2
MINDY1
PRUNE1
ZRANB3
R3HDM1
UBE2J2
COA3
CNTD1
RPP30
PSMC3
PURB
NUP214
SSNA1
ANAPC2
SMG5
ITPR1
ATE1
SPC25
SLC25A44
TMEM222
MRPL19
ZNF684
DHX30
MARCHF5
CPEB3
JTB
PTRHD1
CENPO
ZNF181
IQCH
AAGAB
MEA1
KLHDC3
SERBP1
ARPP19
TTC31
CCDC142
ADPRS
RPL29
DNAJC14
ZNF565
ZNF146
NELFB
MON2
CD2BP2
ANGEL2
PCBP2
KLHL20
TARDBP
RPL27
ZNF460
TMEM129
TACC3
TIPRL
ACP6
MTMR9
EXO1
FAM32A
CCDC59
HDGF
TMEM258
FEN1
C18orf25
ZC3HC1
SLC30A6
C8orf76
SEC13
TTC30A
EMSY
CCNC
HBP1
USP15
MYBL1
PSMF1
TMEM41A
ZNF302
FBXO9
ZNF286A
DMAC1
PPP1R7
PASK
LRRC8A
KYAT1
OTUD4
SSU72
TMEM150A
REXO2
BLOC1S5
IQGAP3
WRAP73
TRMT10A
MTTP
RAD52
ATG4C
NDUFS3
KBTBD4
KLHL24
RHOT2
FARSA
TPR
ODR4
DYNC2LI1
FIS1
BIVM
POGLUT2
TPRKB
FAM207A
VPS45
MRPS22
CSNK2A1
WDR70
TAF8
NFATC3
YWHAG
GAPVD1
GTF2I
MAP3K13
VPS35L
SHOC2
BBIP1
RBM22
ETFDH
C4orf46
RCAN1
C7orf25
TOE1
MUTYH
ZNF688
GMPPA
FAM193B
ZNF571
ZNF540
ELOB
LSM10
ERI3
IDH3B
ADPGK
CC2D1A
C19orf57
CNOT2
ZNF570
ZNF569
RPL22
PUM3
RPLP2
ZNF134
KDM4D
CWC15
MRPL12
NDUFB10
C16orf86
WASHC4
POLR1B
CIZ1
DNM1
SPDYE14
SPDYE10P
MPI
AP5S1
EIF2B5
M6PR
KLRG1
SELENOH
NDUFV1
DENND1A
METTL17
SPECC1
SFXN5
TMED10
ABT1
FOXJ3
SNAPC3
LONP1
CATSPERD
ZNF513
POLR3F
DZANK1
BRD3
TTC30B
EEF1D
TIGD5
TRIP4
RPS28
NDUFA7
ATR
TUBGCP3
SNAP47
JMJD4
RRP15
RDH14
TMEM214
TSSK6
NDUFA13
SLC39A3
LRWD1
ALKBH4
WDR24
MBD1
ZNF668
ZNF646
CANT1
GDAP1
ZNFX1
XAB2
LRPPRC
NUP107
CHCHD5
DCTN2
AHCY
KAT8
LTN1
EIF2D