ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501657 | A-375
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◣ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

GSTA4
H4C15
H4C14
WDR74
GBA
NUF2
FRA10AC1
DSTYK
MTRNR2L8
SF3A3
MRPL21
IGHMBP2
INTS5
POLDIP3
STX16
RBBP5
C12orf57
H2BC21
H2AC20
H2AC21
SAR1B
S100A2
UCKL1
EIF2D
SNAP47
JMJD4
FAM227B
DTWD1
SSBP1
HMGB1
USPL1
INTS12
GSTCD
NR1H3
ACP2
SELENOH
H4C8
S100A16
ZBTB45
TRIP4
DRG2
NDUFC2-KCTD14
NDUFC2
TATDN3
NSL1
SMG8
RPS7
CCNL1
RPL37
H2BC18
H3C13
NPAS4
SIRT4
TBC1D19
ZNFX1
NDUFS3
KBTBD4
PSMF1
CCDC107
RAD54L2
H4C11
EIF1AD
BANF1
DCP1A
NMNAT1
LZIC
MTRNR2L2
H2AC19
H2AC18
CCDC88A
YARS1
S100PBP
METTL9
STAT3
DPY19L4
H1-3
SLC44A1
NOC4L
DDX51
GARS1
POLR3E
MRPS23
C17orf75
H1-4
LAMP1
SEC13
NME1-NME2
NME1
MRPS18C
HELQ
ERCC6L2
SCNM1
LYSMD1
RUVBL1
LRRC37A3
DMAP1
CUL4A
PCID2
UQCC1
ADPRHL1
ETV4
RPS6
STOML2
H1-2
PRRG2
NOSIP
SRSF4
MGAT5B
JRK
GTF2H2C_2
GTF2H2C
TUBGCP3
DDIT4
H4C12
MRPL40
HIRA
MTF2
H3C3
KLHL20
AAR2
LRRC59
PPIP5K2
GIN1
NUP54
TAF1D
C11orf54
AURKAIP1
TVP23B
CALHM2
MAT2A
CDKN2AIPNL
KMT2C
RGPD2
RGPD1
MPHOSPH10
MCEE
ARL8B
H3C15
H3C14
TSC2
NTHL1
PSMD9
HPD
STX18
CLUH
NFE2L2
KNL1
VPS28
POLG
TTC4
H2BC11
H2AC11
RPLP1
STAG1
MRPL1
WDR24
C12orf65
TTLL11
SMARCD2
PSMD6
JUNB
TSFM
DNAJC25-GNG10
DNAJC25
SCAND1
ATP5MC2
GEMIN7
BNIP1
RPL41
SYT7
SRSF7
DUS1L
RANBP2
REXO4
SNRPE
GTF2H2
DDX1
MLEC
ST3GAL2
GINS3
LAMTOR5
RPS20
NUP153
COMMD2
NSUN4
C8orf37
ADPRS
FAM98B
MRPL34
PAFAH2
CCAR2
AQR
SDHAF3
TBL3
MCOLN1
G6PC3
BANP
NR1H2
COMMD1
CCT4
SLC33A1
MRPS14
DDX19A
DCAF10
PYROXD2
RPS19
INO80B
ALG10B
KDM1A
MRPS35
TMED2
PHF12
ESCO1
NSA2
GFM2
GTF3C3
DHRS3
RPL27
BAX
TEFM
MAPK1IP1L
FAM133B
MAZ
ZNF749
RPS3A
SPRYD4
TRMT61B
PMPCA
ENTR1
TRPM7
TIMM22
SNRPB
MRPS31
LDAH
C12orf73
CBX5
HNRNPA1
CLCN7
SNRNP70
KCNMA1
WDR36
SFPQ
UCHL5
RO60
TMEM222
BRF2
RAB5IF
AP3S2
NFX1
H4C3
DNAJC2
MED4
CIAO3
RCAN1
MRPL55
RPL12
LRSAM1
MORF4L1
USP30
MTIF2
ZNF398
ZNF425
ADAR
EFCAB2
NCOA7
PHLDA1
COQ8B
ILF3
UTP3
VIRMA
H4C9
ERCC1
ACYP2
OMA1
DAB1
RPL29
TOR1A
MED18
FZD1
PPP1R14B
MRPL58
PPRC1
MRPL20
PURB
TOB2
ILF2
ID1
VPS36
AARS2
GPRC5A
HEXIM2
FAM207A
BMS1
H3C2
CZIB
H3C1
H4C1
RIN1
CDK5RAP1
C8orf33
NOTCH2NLC
COX16
ADNP
NOL11
POLR2J
ATXN2L
MRPS2
C9orf116
TMEM101
FAM228B
SF3B6
TACO1
INO80C
TTI2
ZER1
RPL26L1
GTF2B
OTUD7B
PPP4R2
YIPF2
TIMM29
PRPF4
CDC26
ZC3H6
VPS72
MBTPS2
UBA52
ZC3HC1
CCDC59
EFTUD2
CCDC103
ZNF3
CCDC15
MAP2K3
H4C6
UBL7
KCTD5
RRP15
DPP8
PNPT1
EIF3G
TMEM39B
CCNT1
TBC1D13
RPS15A
HIPK1
ATAD2B
PHB2
RPTOR
CTNNB1
DCAF8
PANK4
MAF1
SLX1B
SLX1A
BOLA2B
BOLA2
NFKB2
IDH3B
LIG4
ABHD13
GPN1
CCDC121
SNRPD1
LMNA
MRPL27
EME1
CSKMT
C11orf98
FAF2
UBA2
PRMT5
MBNL2
TOR2A
WDTC1
DUS2
DDX28
EMC4
CRB1
PRDX1
RASA1
MYL5
ATP5ME
SEC22B
RPGR
TMA16
CPSF1
TBL1X
NFYC
TMEM250
ALDOA
ARL6IP1
PARP2
YWHAE
MLLT11
CDC42SE1
RPL28
TRAF7
COMMD9
ATP5MF-PTCD1
ATP5MF
ZMPSTE24
WDR70
TBPL1
MAN2C1
SMG7
H2BC4
H2AC6
H2BC14
H2AC14
HSPA6
C19orf53
OAZ3
MRPL9
EIF2B3
SOS1
ADAM22
TAS1R1
NOL9
CLUAP1
FCHSD2
RPS27
TPD52L2
ITGB3BP
EFCAB7
RRP9
PARP3
BTRC
OPA1
DPP9
SNRPB2
LRWD1
ALKBH4
HEXA
H3C12
H3-2
MTR
MRPL3
CIAO2B
CES2
BIRC2
RPS24
SHMT1
RNASEH2C
RAD52
CD2BP2
SF3B4
SRCAP
LOC730183
RPL5
SAAL1
TRIB1
TSNAX
MIA3
TMEM230
RFXANK
BORCS8
YTHDF2
TCF12
ACBD3
MYH7B
GSS
INPP4B
BCAT2
SH3TC2
FRMD4A
OSCAR
NDUFA3
RPS16
EPRS1
ZBTB40
H4C5
HSD17B12
CALR3
C19orf44
PARK7
IQCH
AAGAB
ATF6
RBM45
PCIF1
TAF5
ZNF106
IQSEC3
FXYD3
POLR2J3
SART1
HEATR1
RPL26
NACA
NAA20
DCLRE1B
AP4B1
R3HDM2
C5orf15
CPT2
SLC20A1
MBLAC1
TGFA
RPS3
BOD1L1
CNPY2
SMG5
ZNF286A
USE1
TMEM259
FAM3C
OCIAD1
PDS5A
GALK2
CDC25C
COPS2
FAM53C
PUM3
NDUFAF5
ESF1
POLR3B
PPP6R1
SYCE2
IFRD2
SNX17
EIF2B4
RPL22
NUP107
MTOR
PRKAR1B
CDK12
FAM200B
ETV3
NBPF15
RBSN
GOLGA1
THEM4
PBRM1
GNL3
BUD13
YTHDF1
H2AX
QTRT1
H2BC15
H2AC15
CEP135
GPR180
SRA1
PYGB
SEMA3B
MRPL24
NDUFS7
SRFBP1
ASB6
ZCWPW2
AZI2
STYXL1
LCMT2
ADAL
NBPF1
CAAP1
BLOC1S6
POLM
PARD6A
ACD
RBM28
NUCKS1
INPP5F
WWTR1
PCM1
INTS4
TSSK6
NDUFA13
ZNF696
NDUFA12
H4C4
ZSCAN30
DOHH
ACBD5
SNX19
ARHGAP19
PSMA1
NUP133
NCOA5
CUTC
COX15
DHX8
DIAPH1
LARS2
AP1G1
SNF8
SECISBP2L
E4F1
UBE2D3
SACM1L
RABGAP1L
CISD2
FCRLA
SMN2
SMN1
CCDC124
UTP25
FARSA
WDR11
ULK4
HAUS5
H2BC13
H2AC13
ENO1
SPHK2
RPL18
KRR1
USF1
MAGOH
SLC3A2
TRIAP1
TPK1
H3C8
AVPI1
CWC25
MITD1
TBC1D23
TTC17
CDC73
TAMM41
TAF12
GTF3C5
ARHGEF12
IMPDH2
RNF166
CTU2
YAE1
PKMYT1
PEMT
ZNF721
PIGG
RPL6
FBXO31
POLR2C
C1orf74
MAPK8IP3
PHAX
IREB2
COMMD4
PTPN11
AMACR
ETS1
ALDH1A3
ZCCHC4
SLC30A6
COPS7A
ZNF668
ZNF646
SLC39A3
TBRG4
GTF2H3
EIF2B1
BORCS7
POR
SRSF2
MFSD11
MSL2
GGCX
SEC11A
SLTM
COA7
PDS5B
TOR1AIP1
TTC1
PEX12
PSMD3
HSPA9
STX4
EXOSC6
NUP42
DHRS13
INKA2
DDX20
VAMP1
PTBP1
TSN
NSFL1C
ZC3H10
SSNA1
ANAPC2
DIDO1
GID8
POLR2M
MUL1
NOC3L
DDX59
H4C2
HSPA8
ING4
TMEM208
LRRC29
RMND1
ARMT1
STMP1
B3GAT3
RSRP1
C8orf76
SLC35E2B
NOTCH2NLA
NOL7
MEPCE
ZCWPW1
RARS1
VAMP4
KLHL12
ORC5
ZDHHC7
MTAP
H3-3B
SPNS1
LRCH4
FBXO24
M6PR
KLRG1
CHD1L
RPL23
RPL24
EDC4
PRDM10
MZF1
RBM12
CPNE1
DCBLD2
ATN1
RDH5
PRCC
ABRAXAS2
MRPL44
DNAJC11
SLC25A51
RMDN2
SIK2
AMOTL1
H2AC4
OR2L13
RPS13
SETDB1
TTC14
HEXIM1
FBXW2
RPL35
ARPC5L
SRPRA
MRPL38
RINT1
METTL2A
LTA4H
RAD23A
COX20
GPX1
NWD1
SH2B1
SLC24A1
INTS14
SAP30
AP5S1
RPS28
NDUFA7
IPO4
THOC5
PPP1R8
NDUFA9
AKAP3
SEC14L1
FUS
TBRG1
H2BC17
H2AC17
TTPAL
ZNF256
UBE2Q1
NCBP3
DDX46
MRPL48
PINX1
MRM3
GLOD4
MANBAL
C2CD5
GPN2
TAGLN2
NSMCE1
LTBR
KBTBD6
ERLIN2
TIGD6
HMGXB3
FRG1
MRPL33
SLC35A4
APBB3
LONP2
ABCC11
DENR
GATAD1
FBXL18
YKT6
TIMM50
RPL7A
MED22
TAF1B
RPSA
RPL17-C18orf32
RPL17
ISG20
MTCH2
MEOX2
PNPLA6
MRPS15
STAT1
EEF1A1
RANBP6
TPT1
ZBTB37
HDAC4
COIL
H3C4
UTP14A
EPHA3
CAPS
KHDC4
GABPB2
EDEM2
PSMB7
UTP23
MFAP3
FAM114A2
ZZEF1
CYB5D2
RAD50
SNAPC5
WWP2
NEURL2
CTSA
MICOS13
HSD11B1L
UQCRQ
GDF9
PPIL3
NIF3L1
EIF4A3
ZNF76
HACL1
BTD
MYDGF
LEO1
B9D1
EPOP
SMARCA4
ZBTB38
TRAPPC3
ZNF484
SRRM2
GOSR1
USP19
WDR55
AP2A1
AXDND1
NECAP1
GAPDH
TUBA1B
SYTL2
HRCT1
ZSCAN22
C16orf91
SLMAP
MVB12A
MKRN2
PKIG
RFC2
ARL14EP
CLNS1A
TOMM40
MAGOHB
U2SURP
MRFAP1
SLC35A3
TMBIM6
ANKRD18B
ROBO3
HNRNPH2
ALX1
ALG10
DNM2
SLC35B1
GPATCH4
RAD9A
BTG1
ARID1A
SZRD1
PSMD8
VPS29
RAD9B
PRELID3B
FLRT3
AGMO
S100A3
POLR3F
DZANK1
TRAPPC4
RPS25
NSUN6
ABL2
MYOF
DGAT1
POMP
SRSF1
NEK4
IER3
ECI1
ZDHHC21
RAB7A
ZNF335
C6orf89
SURF6
THUMPD3
CANX
STEAP1B
MRPL4
HM13
MLF2
HPS1
ZNF575
SHPK
CTNS
POLE3
C9orf43
TRIM46
KRTCAP2
PET117
KAT14
LIN54
BORCS5
DNAJB1
SCN11A
WDR48
TECR
HERPUD2
NR4A1
AP2B1
VTA1
NMBR
PARL
TRDMT1
RNF34
RAD23B
USP48
AHCTF1
GFM1
LONP1
CATSPERD
CGGBP1
ERCC5
SRRT
MDM4
KMT2D
TNPO2
HSP90AB1
FBXW9
C3orf38
TRIB3
ZNF408
ARHGAP1
PRPF6
TIGD1
EIF4E2
RABL2B
TXNDC15
ZNF185
PSRC1
C1QTNF3
ZNF140
RBM8A
DNAJB12
PIGC
STAMBPL1
GPN3
FAM216A
CLIP4
RWDD1
CPPED1
PMS1
ORMDL1
VPS33A
FAM168A
CSTF1
AURKA
EXOSC3
RAB8A
ZNF593
C1orf232
NTMT1
SHISA4
UBQLN4
LAMTOR2
H2BU1
H2AW
CXCL1
DNAJC14