ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX203391 | Plasma Cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◣ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

MLLT1
UTP25
CDIP1
RRP15
G6PC3
METTL1
EEF1AKMT3
RRP1B
HSF2BP
DDX42
CCDC47
EXOSC5
BCKDHA
ZCCHC7
NME1-NME2
NME1
TRIM59
NPM1
UBE2Q1
THAP5
DNAJB9
SCFD2
SUPV3L1
RAB4A
UTP11
UTP20
PWP1
KLF16
ATL3
MEX3D
TWNK
MRPL43
RRP12
PMVK
SGTA
XKR9
LACTB2
USP2
HDAC2
PMS2
AIMP2
INO80
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
RPSA
NCL
AP3D1
HBP1
RPUSD4
FAM118B
PSME3
NSUN5
QTRT1
GPR180
SECISBP2
TBCB
POLR2I
MRPL3
COPS7A
PPAN-P2RY11
PPAN
SPRYD4
WDR4
PINX1
UBA52
SLC19A1
PAK1IP1
C6orf52
HSPBAP1
SLC49A4
GET4
GOLIM4
SNRPE
NCBP2AS2
NCBP2
KDM3A
C10orf88
TBL1X
LARP1
EIF3B
SHC1
CKS1B
UTS2R
ARFGAP3
RRS1
PES1
GPATCH4
CTSF
NLE1
TTC27
CLK2
CCT2
TSN
CCDC86
LONP1
CATSPERD
PBRM1
GNL3
AIP
QTRT2
CCDC191
TMA16
ZFYVE27
PNPO
URB1
SFT2D2
DERL3
RBM28
DUS3L
PLD6
ODC1
THNSL1
PNO1
EIF2B3
DPH1
MATR3
NOM1
ZFR
SUGP2
ARMC6
TRUB2
COQ4
ADNP
ARSG
OSER1
RHBDD1
EPOP
PALD1
SLC25A26
RIOK2
KCNN3
DCLRE1C
TMED1
TMEM248
VMP1
PTRH2
GOLGA8A
TMEM268
SAE1
EIF4G1
UBAP2L
C1orf43
CENPF
WIPI1
DHDDS
CLN6
ZMAT1
NOP16
HIGD2A
ZNF280D
GNB4
STXBP2
N6AMT1
TAF4B
LAMP1
RNF145
HEATR1
TBC1D15
RPA2
SEH1L
KAT5
GABPB1
NAT10
TOP1
PPAT
PAICS
PPA1
CYTH1
CD320
SNX5
MGME1
RFC1
IQCG
RPL35A
TEF
NOC3L
MET
IARS1
ZNF131
MRPL24
URB2
TAF5L
DBP
AKAP10
CCDC107
MYBBP1A
RNF32
DISC1
PRKAR1B
TRMT1
FOXRED2
CRY2
ZNF473
VRK3
ELOVL3
MCOLN1
MDN1
CYP2R1
CBR1
HMGA1
WDR74
NKIRAS1
FOXK1
NR1D2
PPID
SIRT1
MTHFD2
CAD
ABCA1
UBFD1
EARS2
MEPCE
ZCWPW1
WDR26
ZNF783
WASHC2A
TBRG4
SPOP
PDE12
RPAIN
NUP88
MRTO4
EMC1
ANAPC10
ABCE1
ZNF202
STK25
C1QBP
CDC16
CASP8
SMIM12
PER2
MED26
VPS52
RPS18
AK2
EPB41L4B
MSL2
SLC12A9
MFF
SURF6
TXNIP
FBXO32
RANBP2
CBX5
HNRNPA1
ARHGAP35
TFB2M
CNST
RGS16
THOC5
RRP9
PARP3
PHB
DNAJC11
DDX21
FBXL20
MXD3
RNMT
FAM210A
TCOF1
FDX2
AKT1S1
TBC1D17
BCL2L11
NOL7
TIMM44
CASP2
BRWD1
YIPF3
POLR1C
RPP40
SELENOH
UBE2V2
ST6GAL1
ZZZ3
KPNA4
JMY
NDUFAF5
ESF1
PGBD5
DIAPH1
PNPT1
ZBTB49
LYAR
DFFA
EIF4A1
RAD9A
SMYD5
RANBP3
TASOR
BCAS3
GALK2
LY9
TRMT6
MCM8
B3GAT3
PTBP1
YPEL1
SLC39A11
UNG
ZNF280C
NUP35
NADK2
RPL23A
ASPSCR1
CERK
YARS1
S100PBP
HES1
CLDN14
ACSS1
SENP2
RPL31
UBIAD1
RPL10A
PCCB
AKR1A1
RAD50
PUM3
NOP14
GRK4
CNOT4
SDAD1
ZNF292
SLC25A10
KCNAB2
REPIN1
MED20
BYSL
CD164
C12orf66
PAXBP1
DUSP23
ALG8
PDE4A
RPL22
DPAGT1
NEPRO
ALKBH2
KLHL18
KIF9
DYM
RIOX2
DGAT2
NOL6
UBAP2
CCDC126
ATIC
NOP2
UBE2S
KIF2A
PIGW
MYO19
NT5DC3
TFRC
WASHC2C
ZNF124
TRAPPC6A
BLOC1S3
MSTO1
RSF1
AAMDC
MFSD3
DDX3X
CDK4
RPF2
FAM174B
CMSS1
DHX9
POLR1B
RPL9
LIAS
RPL38
DUSP2
DUSP28
ANKMY1
PHB2
SSBP1
FAM222A
TTC26
MCM7
AP4M1
TMCO4
SRP19
KHSRP
C12orf45
PRPF3
AATF
VEPH1
DOHH
RRP1
RABGEF1
RNPS1
EIF5A2
TNFAIP8L1
MRM1
TFAP4
NOLC1
FLAD1
EEA1
UBE2G2
NOL8
CENPP
ZC3H8
EZH1
MRPS28
HLTF
ZNF3
PDHB
GBA
DIMT1
NACA
MRPL27
EME1
LIG3
EVI5
SLC3A2
LEMD3
CENPS-CORT
CENPS
FAM207A
ABCF3
WDR81
EIF4H
TMEM161A
PRELID3A
NDUFA11
VMAC
TXLNA
PEMT
CDKL3
UBE2B
GART
GAR1
SLC35A4
APBB3
EVI2A
NFX1
MBD3
INSR
HBQ1
HERC5
SMC3
ABCF1
CDK5RAP3
PIGM
MAP2K2
EXOSC2
DHX40
DYRK1A
RPIA
HDHD5
PRDX4
PIP5K1A
NME2
ZNF438
PFAS
SOX12
SRSF6
EPB41L5
GDI2
PHF20
TAGLN2
PPRC1
VARS1
SOCS5
RSL1D1
TRPM7
CADPS2
SNRPD1
TMEM186
PMM2
RPL5
GGACT
EIF3D
MRPS35
ZNF785
TAF12
POLR3D
MYNN
PPIF
SERF2
KIF20A
BRD8
SETD6
GIMAP2
ZNF692
TPRA1
MCM2
LRP2BP
ANKRD37
TMEM185B
ARHGEF3
RASA4B
AEN
SYNRG
REX1BD
EBNA1BP2
CFAP57
RAD23A
PAAF1
COA4
RPL39L
NABP1
REXO2
TMEM183A
KLF9
DPH2
DMAC1
USP14
TEX15
C16orf91
SLC33A1
EIF3E
TNFRSF10A
MAPK8
EEF1AKNMT
MAGOHB
ACOT7
MFAP3L
SERP1
EIF2A
SEC14L1
UCHL1
GNL2
HSPA9
ADCK5
ARF4
POU2F1
VPS50
HEPACAM2
ANAPC1
HSP90AB1
PPIL1
CXCR5
SMIM20
SRD5A1
MAN1B1
WDR46
PFDN6
MARCHF8
ATP5F1A
ITFG2
NDUFS1
EEF1B2
FAM78B
NLRP1
LARS1
SRSF7
DNA2
LZTFL1
COX10
COQ8A
FAM76A
TRMO
NR1D1
MCRS1
URI1
NME6
SMARCA2
ATP6V0D1
ARHGAP32
RPL24
RPS2
CKLF-CMTM1
CKLF
NRAS
KCNQ5
TMEM97
MRPS33
LARS2
ECHDC1
RPS19
IPO7
NOL10
UMODL1
PACRGL
DYRK3
MGA
RPL17-C18orf32
RPL17
ATP5MC1
FANCF
LRRC34
CREBRF
ZNF142
BCS1L
MTR
PARL
NOB1
MRPS18C
HELQ
CUL4A
TRMT61A
POLI
PPP2R3B
ATP9B
YPEL5
RNF44
TRIM8
CCDC6
IKZF3
TOR1A
PDPR
EIF4EBP3
TSR1
SGSM2
IPO4
PRR19
PAFAH1B3
TIMM22
C12orf29
DDX56
SLC41A2
CIRBP
GLS
TIGD2
SCAMP3
PGRMC2
XRN2
PISD
MRPL1
TOMM70
LNP1
U2AF2
FAM3C
TET3
YJU2
DHX37
NARS2
DNAJC1
CAND1
NOP58
VPS29
RAD9B
CCDC61
ZNF771
AKAP11
SNX15
MRPL15
RBM19
GUCY1B1
NIFK
MRPS21
AURKB
BAX
HPS5
GTF2H1
RCCD1
TIAL1
SF3B3
COG4
FKBP11
PAFAH2
ABCF2
INTS7
DTL
UCKL1
SYCE2
PSMD9
HPD
TMEM109
RABGGTB
TMEM192
EIF4B
PCBP1
MRPS18B
TXNL4A
RBFA
SPESP1
NOX5
RNASEH1
GALNT14
ZBTB37
RPA3
UTP4
DERPC
CHTF8
WDR17
NUP153
CCDC124
PRMT3
CNPY3
ABRAXAS1
KIF27
KLF4
TTLL12
LSM6
MXI1
PNPLA7
HSPE1-MOB4
HSPE1
HSPD1
KMT2D
CRNKL1
CFAP61
UPF2
SRM
PRCP
POGK
DDIAS
UBQLN4
LAMTOR2
MRPL42
KLHL32
NDUFAF4
KLF11
MPDU1
LOC100996842
RPL37A
ING5
RHOG
RIOK1
CAGE1
USO1
SMG1
SFXN4
ATP5MC2
PARD3B
RCL1
CTXN1
SMIM11B
SMIM11A
ACAD9
ZBTB10
ANXA2R
SETD4
EEF1E1
POLR3H
MRPS17
COA7
RPL27
UFC1
GOLT1A
PPP1R13L
POLR1G
STX4
POLE4
PIK3R3
SCAP
FAM111A
STMN1
CLN3
USP36
MRPL17
CMTR2
CTU1
DHX36
DDX39B
H3-3A
RNF227
STAT1
SH3BGR
LCA5L
PTP4A2
ERLIN1
GEMIN4
TSACC
CCT3
GFM1
IMMT
PPFIA4
TOMM20
CNNM2
PET117
KAT14
CTPS1
VPS8
ALDH3B1
DIDO1
GID8
FRAT2
WDR36
PLD3
C19orf47
IMP4
CCDC115
TBCEL-TECTA
TBCEL
IFRD2
MIEF1
SLC35F2
ABCC4
RYBP
WDR43
CEP131
TDRKH
MEST
TIMM13
B4GALT3
RPS16
C10orf143
AARSD1
IL4I1
NUP62
ATF5
ERCC6
NUP205
RFC4
GTF3C4
DDX31
TELO2
WBP2NL
NOS1AP
HK2
AGPS
FBXW8
CCNB1
NUP155
RRP7A
DHX34
SNRPA
C19orf54
SH3GL1
NMRAL1
HMOX2
SLFN13
RASGRP3
DYRK1B
USP37
CNOT9
CLCN7
ADAR
OSGEP
APEX1
SEPSECS
LYRM4
FARS2
PLK1
TNFRSF21
RPP25
PTGES3
GPR176
GRWD1
TIMM10
MRPL45
FASN
TOMM34
NTMT1
RPS3A
ZNF565
ZNF146
MORC2
RECQL
GOLT1B
RPL26
PREPL
CAMKMT
ADORA2A
STK33
ACY1
CENPA
MFSD4B
WDR5B
RFESD
PPT1
TEX14
RAD51C
TMEM43
CHCHD4
PGAP2
IFT140
CRAMP1
DLD
TSNAX
POLR3E
SNX8
SLC38A9
COA6
LDHA
HLCS
LY75-CD302
LY75
SRFBP1
HSPBP1
HNRNPF
SLC2A4
PRKAR1A
BUB3
THADA
RAB3GAP2
ZNF574
GEMIN7
IREB2
BSG
WDR53
FBXO45
CTSC
BRD2
AKAP1
SCAPER
INTS3
HLF
GTF3C2
EXD1
CHP1
MFAP1
RACGAP1
COMMD1
CCT4
MON1A
SLC39A8
ARMC5
FAM174C
PRMT1
LMLN
MYDGF
TTC7A
MCFD2
ARHGDIA
UTP3
ZNF263
SAYSD1
CUTA
CLUAP1
FPGS
RBM3
SMYD2
COMMD6
UCHL3
PSMB10
PDIA5
PUS1
ZYG11A
BOLA1
PDIA4
KDM4C
HIRIP3
PDCD11
ATP5MD
RCOR3
THUMPD3
NET1
UBA6
TCFL5
ZNF460
SGO1
SCAND1
HNRNPL
RPL22L1
LTV1
GID4
ATPAF2
MCCC1
GSR
RPL11
RABL2B
NUP50
SFXN2
ARL3
GLRX2
ABCA3
ABL2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
KNOP1
PRDM15
DNPH1
RPL15
LSG1
SSR3
AGPAT5
TBC1D13
TRMT61B
ZCCHC3
WDR12
CARF
RGS3
RFX5
TEDC2
TEX10
RPL29
SHQ1
TNPO2
SPAG4
MICAL2
TRPC4AP
NUTM1
NOP10
C19orf48
POLE3
C9orf43
YWHAH
NFE2L1
PTGES2
PLA2G4A
GCDH
NT5C
GARS1
MAP2K7
PDK2
ZNF75A
TIGD7
WDR54
C2orf81