ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375362 | MV-4-11
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◣ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

NLRP12
NFKB2
LAMP1
GATA4
CMPK2
WDFY3
SPATC1
ABT1
PLSCR1
STEAP4
PGK1
BOD1
PDLIM2
CALR3
C19orf44
GSTA4
XRCC5
NIBAN3
EXOSC4
IFRD2
SCNM1
LYSMD1
FEM1A
H4C11
SMPD3
ZNF444
CTTN
CALCOCO1
GSPT1
RPS19
H4C12
CHMP4B
DCP1A
RNF149
SCAF1
UBXN8
NUDCD1
NUTM1
NOP10
DYNC2H1
DDX58
PEX3
ADAT2
GBA
TMEM243
NDUFS7
KBTBD6
MTF2
NBEAL2
DCAF12
NBN
MICOS13
HSD11B1L
ZCCHC4
SH3BP2
ZNF221
JRK
PANK4
MEF2C
EXD1
CHP1
FBXW4
NDFIP2
MED23
PNKD
AAMP
PPP1R12C
TOR1AIP1
MTMR9
DPY19L4
TSSC4
GRPEL2
TSNAXIP1
RANBP10
INTS9
HMBOX1
ARHGEF1
APOL6
MTIF2
SIGLEC1
ZBTB45
TMTC3
CEP290
ST3GAL2
PAFAH2
CLPB
POMP
KBTBD7
PGBD4
EMC7
ZC3HAV1
CD1A
H2BU1
H2AW
TBPL1
TYROBP
PEX12
CYP4V2
H4C15
H4C14
GNG2
C1orf159
JOSD2
CCAR2
RPS20
GTF2H2C
GTF2H2
TLR4
ZC3H6
SLC1A5
ZNF554
UCKL1
TPRKB
MAPKAPK3
CISH
USP3
GTF2H2C_2
FAM207A
MRPS31
PPP5D1
CALM3
HIKESHI
PEMT
VAV1
BANK1
LRRC37A3
KMT2B
DRG2
RIPK1
TMEM115
FBXW11
BTRC
CD33
ARID5A
SF3A3
SSBP2
FRG1
TMBIM4
MEFV
KANSL3
SLC39A13
SYMPK
FOXA3
H2BC18
H3C13
NUF2
DOCK8
FRA10AC1
MS4A3
PTK2
FAM227B
DTWD1
NOTCH2NLA
MRPS18C
HELQ
PPP6R1
CTU1
AURKAIP1
ZNF76
TCEA2
ICAM1
TIMM21
FBXO15
VCPIP1
C8orf44-SGK3
ZSCAN22
IPPK
BORCS7
TMEM91
B9D2
E2F4
MINDY3
PLEKHM3
PRKCE
TMEM222
TRDMT1
ANKRD40
SLC24A1
INTS14
AP2S1
BAZ1A
LTBR
MRPL24
ABCF2
CCDC9
HIBCH
RNF220
FLT3
NOTCH2NLC
WNT2B
INO80D
ITGA4
ARPC3
UNC45A
ARHGAP25
TAL1
SPATA24
THAP1
LRRC59
LCMT2
ADAL
RBCK1
H4C3
SSBP1
BECN1
GNB4
NR3C1
PROS1
SCRIB
POLE4
CCDC7
GHRL
DDX23
SPPL2A
POLRMT
H1-4
H2BC5
ZNF333
RMDN2
GTF2H3
EIF2B1
CHMP7
IPCEF1
LARS1
MMACHC
CCDC163
TOMM22
RRM2B
BNC2
GFUS
CHCHD5
DRAP1
C11orf68
TMEM68
TGS1
VPS13B
DENND4B
NDUFS3
KBTBD4
RPL29
ASGR2
PPRC1
FAM228B
SF3B6
RNPEP
TAF1B
MRPL34
NSMAF
NEDD9
RASA1
RPS15
SIRT2
NFKBIB
APPL2
EIF2D
ZC3H3
JMJD1C
ZNF780A
SNX17
EIF2B4
ANXA2R
MAPK1IP1L
RPS3
KEAP1
ZNF148
SLC35F5
COX18
FUT10
NSFL1C
SLTM
INTS12
GSTCD
DNAJC11
RAC2
H1-2
AARS2
MRPS28
ALDOA
POLR2J3
RMND1
ARMT1
CCPG1
C15orf65
ZFYVE1
MITD1
RUBCNL
INVS
ERP44
TTC33
BRF2
DR1
DPY19L3
KASH5
FBXL19
UCHL5
RO60
INO80C
OPA1
H4C4
ZNF410
ZNF286A
ELOB
LTB4R
ZNF350
ATP5MPL
FNTA
PHB
SLC44A1
SEC14L1
PSMF1
NTAN1
ZNF749
HMGB1
USPL1
POR
FLOT1
CYRIB
CTSG
SIRT6
ANKRD24
RHOT2
TIMM10
SNUPN
CLDND1
ZNF180
PEAK3
CHD1L
PRKAB2
MOB4
ANKRD18B
PSMA8
TNFAIP1
IFT20
TMEM229B
CEACAM21
ASNSD1
ASDURF
RPS6KA1
ENOSF1
ZAR1L
BRCA2
LILRA2
RPL5
REXO1
FBXW7
SMC6
GEN1
PIP4K2B
HIF1AN
DSCC1
PA2G4
HNRNPUL1
TSC2
NTHL1
NCBP3
PCM1
RPL27
TRIM25
TRIM44
EFCAB2
SDHAF3
GTF3C6
AP3M2
WDR87
SIPA1L3
RAD23A
RSU1
RASSF5
SLC33A1
ARHGEF18
TSG101
RFESD
REX1BD
FZD1
HCK
AP2B1
WDR55
RPP38
RALB
TSSK6
NDUFA13
KCTD18
ARMH3
OBI1
ZNF225
PRRG2
NOSIP
TSC1
GFI1B
NDUFB7
TMEM242
KMT2A
RAB4B
RPIA
SDSL
C6orf89
SGF29
REEP3
RNF125
DNAJB2
CCDC114
TCTE3
ERMARD
ANKRD46
PARK7
RSAD1
SPRED2
DCLRE1B
AP4B1
SMPD1
TMEM208
LRRC29
INTS10
TRIB1
SIRT1
YES1
MRPL44
CCER2
DSTYK
DHX8
SLC35E2A
SNRNP200
TEFM
TMEM123
INPP5D
PGBD2
CCDC152
RPS7
EXOSC3
ZNF557
PIK3CG
TFPT
PRPF31
DGAT1
POLR3B
DISC1
BLOC1S5
PSMA1
H4C9
GTF2A2
RBM17
UTP3
CFAP298-TCP10L
CFAP298
DMAC2
C1orf53
PNPLA6
RRS1
UNK
MRPS23
MDM4
H3C8
TRAM1
LSM14A
COPS7B
COPS7A
PISD
PRICKLE4
FRS3
ZSCAN30
RMDN1
NCLN
RFC2
CCDC97
MARCHF7
CRH
NUP54
ECSIT
NOTCH1
SVBP
ERMAP
ZNF235
CAPN15
FKBP1A
THOC3
LST1
ANKRD13D
PEX2
H3C1
H4C1
ZNF226
RBM28
RAD54L2
SNRPB
HSPE1-MOB4
HSPE1
HSPD1
ATXN2
MRPL3
H2AC16
CCDC124
TSPAN10
NPLOC4
MACROH2A1
CCDC88A
HIGD2B
BBS4
CCDC150
CIPC
C10orf88
GARS1
APBB1IP
NFKBIA
CRTC2
PPP1R12B
SLC4A2
CDK5
C16orf91
WASHC4
HUS1
CPQ
SEC13
TXNDC15
MYC
MRPL1
LYNX1-SLURP2
LYNX1
RCOR3
H2BC21
H2AC20
H2AC21
UBIAD1
FIGNL2
FEM1B
EEF2
ZNF558
CAPNS1
HEXIM2
YARS1
S100PBP
TRIM35
PTK2B
THEM4
NEUROG3
TRAK2
STRADB
HINT3
ELAC1
USP15
NCF2
CCDC59
PPIL2
BIRC2
H2BC9
H3C7
TEX22
TBL3
C8orf33
SIGLEC6
TNNI2
BRIX1
TLN1
CREB3
STING1
UPF1
CTDP1
TMEM147
ATG16L1
IQGAP2
STOML1
ZNF623
MRPL16
FRAT1
SLC25A6
SERPINB1
GSK3A
TRIP4
SELENOH
LONP1
CATSPERD
CDKN2AIPNL
MCOLN1
WDR41
HENMT1
SOX6
C11orf58
BRWD1
MAN2C1
PDSS1
ACTR3
ZNF512
UBR2
CLK3
B3GAT3
GABPB1
SCAMP1
GAS6
SLC35B4
POMZP3
SYCE2
MYO18A
IL1RN
NME7
BLZF1
STAT1
SMIM20
H3C3
UBLCP1
SNAP47
JMJD4
RUVBL1
EEFSEC
NINJ2
QSER1
ZNF56
ZNF567
MRPL21
IGHMBP2
S100A13
CHTOP
H2BC11
H2AC11
TBRG1
MED4
RPRD2
NDRG1
KLHL20
MRPL38
MFSD3
MAK16
INSC
PRCC
ELOC
B4GALT7
SH2B1
TUFM
MRPS33
CAB39
TATDN1
NDUFB9
ARHGDIB
AHCYL2
WDR70
RCBTB2
STK25
PLD3
C19orf47
MRPS35
AVEN
IRF9
P2RY14
PIK3AP1
FASTKD1
SMARCD2
SUGCT
MPLKIP
ZNF594
ARHGAP4
SMAD5
SELENOT
TACO1
LDAH
SLC25A32
DCAF13
PPP1R8
ALOX5AP
STYK1
SPHK2
RPL18
REXO4
IRF2
BEND6
DST
CA13
POGLUT3
EIF1B
ERLIN2
EIF3G
ATXN7L2
TNFRSF10A
VKORC1
TMEM41A
TRMT2A
RANBP1
TCF3
PSMD9
HPD
DCLRE1C
ORMDL3
RIC8B
AQR
UBA52
NSA2
GFM2
NELFB
SAR1B
CRBN
SUGT1
C5orf51
TRIM28
RALBP1
POLG
DDX1
ORC2
WASHC5
NSMCE2
RAVER1
NCF1
NACC1
NCBP2AS2
NCBP2
TVP23B
TIMM50
TCF12
CNTRL
DDX18
GABPB2
ZNF331
POLR2M
RNPS1
PET117
KAT14
TNIP2
CCDC90B
UBE2F
CSPP1
KAZALD1
TRIM13
NPRL2
CYB561D2
VPS50
HEPACAM2
FAM3C
UBR1
SEC11C
CDK5RAP1
DPP8
MTBP
MRPL13
RPL37A
IDNK
IL16
RNF6
PPM1M
ZFYVE19
DNAJC17
TTC14
ZNF302
UBE4A
CCNT1
LUC7L2
FMC1-LUC7L2
FMC1
PPCDC
TARS3
IPO4
SURF6
SNRPD1
C17orf75
KMT2D
EXOSC9
TRMO
SFT2D3
TCF4
ERMP1
FADS2
FADS1
RBIS
DNAJB12
RPL26L1
H3C15
H3C14
NOC3L
TOB2
NREP
DOHH
POLR3D
MTPN
LUZP6
PARP2
MEMO1
MORF4L2
EMB
IFI35
LCE3A
STOM
RNMT
FAM210A
VIRMA
RABGGTA
ZC3H4
PRKCSH
CCDC151
COPS8
KLLN
PTEN
UHRF2
TM6SF1
BICD2
LSG1
RAD52
RPS16
USE1
KMT2C
H1-5
GTF2H4
VPS16
PCED1A
MX1
RPGRIP1L
FTO
THAP12
GVQW3
REPS1
VWA8
CCR1
LMO2
TMEM59
TERF2
CLPP
RARS1
ZC3HC1
TXNL1
PGS1
CELF1
HAUS5
WDR82
UBA2
HDDC2
ADPRS
RBSN
STAP1
ASPHD2
RAB39A
CGAS
LIN37
GOLGA3
NMI
RPL8
COMMD1
CCT4
TARBP2
NOXA1
CARD8
ZCWPW2
AZI2
IPO11
MBNL1
MYO9B
HAUS8
ZNF341
SUMF1
PRR19
PAFAH1B3
EPC1
CCDC149
ZNF579
ATP13A1
RPL3
GOSR2
TEX261
VPS37A
CNOT7
SNRNP70
SYK
PPP3CC
CCNL1
MRPS15
THUMPD3
FOXP1
FAM160A1
GTPBP2
MAD2L1BP
GAPVD1
CLTC
CATSPERG
PSMB7
ANKRD17
MYL12A
ZNF219
ZCCHC3
EHD1
ZNF397
BCL2A1
ZNF384
IPO13
PPP1R11
LMAN2
N6AMT1
ABCB10
BORCS5
GATB
SPNS1
C4orf3
MRPL4
MMAA
TBC1D5
ZSWIM9
LIG1
ZNF628
ANKRD36
MTO1
BOLA1
FAM193A
TMEM199
POLDIP2
RPL6
IBA57
RAD50
PSMD11
YIPF2
TIMM29
METTL9
MICU2
CCDC146
RPS3A
TMCO1
NOC4L
DDX51
GORASP2
C3orf86
ADCK5
MSRA
ZW10
CTNNB1
ZBTB17
MED15
SETMAR
AP5S1
ZNF212
ADAR
RPS8
AP4E1
STK36
RNF25
NEK4
IMPA1
C5
EEF1AKMT1
NKIRAS1
RPL15
TSN
TPR
ODR4
PSMD8
ZBED4
NAPEPLD
ANKRD36C
RNF169
KLHL9
SIPA1
BANP
MRPL20
RFXANK
BORCS8
ZNF518A
STAMBPL1
ARID2
HERC6
ATF7IP
ZNF140
CWC25
ZMPSTE24
ASB6
ATP5MC2
PRKAG1
ARHGAP24
UBE2V2
GTF2IRD2B
SLC39A10
ZNF268
MED18
TTLL12
TMED1
H2BC12
H2AC12
ETV6
ZNF507
ZNF527
ZNF2
TBRG4
DCAF10
TSNARE1
SDE2
TOP3B
STAU2
MPG
TGFBRAP1
DPP9
EIF1AD
BANF1
SRP9
SRCAP
LOC730183
PRPF18
DUSP12
PDCD2
COX8A
BPTF
PTPN2
RPL36
EPN1
EIF3K
TAF5
MAP4K1
PEX7
THEM6
RTTN
ATIC
PRKCQ