ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4023329 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◣ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

HIBADH
SPATC1L
SESN1
FBH1
ANKRD16
PKNOX1
SP2
KDM4B
ACAP2
DNM2
RFX1
ZNF687
ZSWIM3
ACOT8
PLAG1
CHCHD7
TMEM60
PHTF2
MAF1
FRMD5
RAB5B
MRTFA
UBE2J2
NLK
GTPBP6
FLAD1
TRAF2
CYTH2
ANKHD1-EIF4EBP3
ANKHD1
DCAF7
EVI5L
HIP1
G3BP1
JUP
KAT6B
AK2
ZNF718
ATP5F1B
OGDH
SP1
PANK2
CIC
AKTIP
CBX5
HNRNPA1
OSBPL2
H2AZ2
STT3A
ZNF141
ABHD2
ACTR1A
CGGBP1
ZNF654
GATAD2A
ZMYM5
ZNF595
RBM27
LRCH4
FBXO24
CEP131
C7orf50
OSBP
PXMP4
ATG9A
ANKZF1
SLC25A25
NAIF1
RHPN1
HSPA2
ZMYM2
RAB11B
STIP1
MPZL1
TMEM160
TNIP1
ZSWIM4
MSANTD4
PPIA
CTTNBP2NL
EIF4A1
DCTN4
SLC26A2
NFATC2IP
BCL2L1
NFE2L1
TDRKH
NCOA2
PABPN1
HTT
WFS1
LYNX1-SLURP2
LYNX1
XPO1
FAM126A
FKBP5
ELMO2
CCDC137
KHSRP
RPLP0
CENPA
GDI2
SPRYD3
TMEM218
SLC25A42
RAB40C
SFXN5
MEAK7
TMEM45A
ETV5
HLTF
SCAI
PWWP2A
HBP1
YPEL2
RPL36AL
MGAT2
MED30
PRRC2B
PLCL1
PODNL1
DCAF15
RAB5C
CDR2
RAB3A
KIF1B
RNF34
ZFYVE21
XRCC3
CHD6
MACROD2
TUBB4B
CDH15
TCERG1
RRBP1
SFXN3
PDZD7
EIF2AK3
SIPA1L2
ZNF564
TEPSIN
NDUFAF8
FAM222B
MLLT1
IP6K1
NUMB
PRDM11
GATAD2B
TRAFD1
ATF7-NPFF
ATF7
MYH10
CBLB
ENSA
PRC1
MAP3K3
BAIAP2
MYH9
TOM1L2
DRC3
PNN
EFNB2
KMT5C
ZNF281
FMNL3
CANX
FRYL
ARL4A
HDGFL2
UGP2
PGAP2
FOXK2
TXNDC16
GPR137C
CYB5A
MYH14
PLIN3
ENPP5
CCDC61
HNRNPL
HNRNPC
ERCC2
KIAA0513
ZSWIM1
PCF11
EHBP1
TOP2A
TSPAN15
CRLF3
SAP30L
MXD4
STK17A
TCF3
ZSCAN32
ZNF174
AKAP8
HGH1
SP4
TRIM32
ASTN2
PLEKHH2
ERI3
CNNM2
ZNF555
KCTD7
IER5L
RPUSD3
LLGL1
DNAJB5
MAML1
MTMR12
DNAJC14
OTULINL
JAKMIP1
DAZAP2
TLE1
ACTR2
EPHA7
BCAS3
EPHB3
PODXL2
ZNF691
PHF20
ASPH
TAF7
GNAZ
SPSB3
ENTPD7
KIAA0232
ZNF200
TP53BP1
OSBPL3
MPRIP
MIEF2
DCAF4
MEGF9
USP20
C9orf78
HRAS
VIPR1
TBC1D10B
MYLPF
SHKBP1
TTBK2
FANCF
NIPAL3
STPG1
ZRANB3
R3HDM1
PMS1
ORMDL1
HESX1
APPL1
ABCA7
IRS2
TRIM9
DCUN1D4
RSBN1L
CEBPG
RAB40B
STARD3NL
MPHOSPH8
MEF2D
HNRNPR
STAT3
IFT27
GET4
PDPK1
ZC3H6
RTRAF
CHCHD2
RPN2
MROH8
GTPBP1
UVRAG
PDP2
KANSL1
RUVBL1
PPP2R5A
DAPK3
PPP3CA
NUBP1
KLF5
RPUSD1
CHTF18
HEY1
IVNS1ABP
NXT1
UBP1
SMAD2
GOLIM4
ME2
TPCN1
IQCD
MLH1
EPM2AIP1
SLC46A3
SLC25A19
NR2C2
EEA1
C12orf65
TMCC2
SRGAP1
TIAM1
LOC150051
TANGO2
ARVCF
SP3
GLRX5
RFX2
TSACC
CCT3
KMT5A
GPR158
ROGDI
NCK1
MROH1
FZD4
MAST4
INTS3
ZCCHC14
MRPL37
CYB5RL
FAM72C
ALKBH5
UBTD1
MMS19
DPP3
PPFIBP1
TRIM35
PTK2B
FOXO1
ZNF492
ARAF
SMARCD2
ADRM1
ZNF563
PCNX3
SSBP2
KAT7
PEF1
GLCE
GATM
SPATA5L1
MAFA
AGPAT1
RNF5
GAS2L3
C16orf72
SLC41A1
ZBTB7A
TRAPPC11
RWDD4
TOP2B
DMBX1
VPS35
PBX1
YWHAZ
C22orf39
GALNT18
GNA12
JPT1
PRMT1
ARRDC3
CREBRF
KCTD9
CDCA2
PC
SUFU
ORC2
SIX2
IGSF9B
SRGAP2
FAM72A
AMD1
MDC1
NUFIP2
SLC25A28
TRAF7
MAPK9
KDM6A
MACO1
SEPHS2
AKAP5
POLR3A
JPT2
CIT
CCDC153
CAMTA1
ZBTB18
FOXN3
SPC24
DRAP1
C11orf68
SPAG7
FYN
EIF5
DIAPH3
ANP32E
ENO1
COPS7B
PDE6D
ANP32A
PLCG1
GLIS1
HNRNPAB
SSBP3
GLCCI1
HOOK1
SYPL1
NXPE3
CCNL2
SRP19
NF2
PADI2
SRGAP2B
FAM72D
MRPL34
ABHD8
BBX
BAZ1B
ZNF626
SARNP
ORMDL2
LMAN2
ITSN1
CRYZL1
HSPA5
AP5Z1
RAB39A
IL6ST
INIP
GOLPH3L
CCDC102A
ZNF443
PSKH1
FMN1
FKBP8
MAPK8IP3
ERAP1
RAPGEF2
WBP1
PIM1
FICD
DDX11
TMEM53
ARMH1
SLC39A3
MARCHF3
N6AMT1
PGK1
LMTK2
ATP7B
ALG11
SEPTIN9
IVD
PER2
RMI1
HNRNPK
OTUB2
GPR108
PAX9
IGSF8
ANKRD54
HNRNPLL
OTX1
TDP1
EFCAB11
LINC02210-CRHR1
HACL1
BTD
SCAMP2
PPM1K
ACTN1
WBP1L
RALGPS1
PCYOX1L
ACYP1
OPA3
KBTBD3
AASDHPPT
EIF4A2
TSEN54
CASKIN2
STK11
ZNF724
PPM1B
NR3C2
PNKD
AAMP
ZDHHC24
ACTN3
OXSR1
DGCR8
PRKACA
AZIN1
DNAJC27
CCNG1
FHIT
MTOR
GBF1
SORT1
PROSER3
HSPB6
CNOT3
SLC4A7
PPP6R3
GFPT1
JARID2
ACTR1B
WDR81
SUN2
INAFM2
SMARCA2
PRADC1
CCT7
RAB8A
STX5
ATP5F1E
AP2A1
SLC39A1
FAM111B
ITFG2
NAXD
PTPN13
HDAC11
DPY19L3
TNRC6B
PDIA6
SBDS
TYW1
BBS10
ALKBH7
SELENOO
RGMB
JAG2
TMTC4
COQ7
NEMP1
CFAP410
ATP6AP1
IRX2
C5orf38
BNIP3L
GRPEL1
FAM228B
PFN4
BPGM
ZNF143
COPG2
HDAC4
LIX1L
GNA11
USP16
RGS9BP
ANKRD27
CYC1
BUB3
AKAP13
CTPS1
DHCR7
DYNLRB1
CAND1
SDC2
KSR2
CBX8
MCM3
MARCHF2
HSP90AB1
MTRNR2L8
TMEM161A
ING1
PRDM15
MIA3
PDXP
RPS11
RHOB
ZNF211
ZNF774
INPP5B
SLC15A4
KANSL2
SLFN5
LCORL
MAFB
CREB3L2
ECHDC3
MTFR1
YIF1A
TEN1
ACOX1
LIN37
PRKD2
PRPF40A
ARL6IP6
RRAGC
HS3ST3B1
FKBP3
RTTN
ELAVL1
NFIL3
MAF
ZNF367
NBR1
ISOC2
CEP152
RNF20
ZBTB20
FAM174C
POLD2
ARL17B
ARL17A
BICRA
TOM1
DUSP10
ZSCAN20
TPPP
MEA1
KLHDC3
CCDC91
RBM4
ZNF823
CHPF2
DDX19B
AARS1
HINFP
GRK6
TTLL5
ERG28
ORAI3
KCNAB2
PGD
KANK3
ZNF98
ATP6AP2
F11R
ZNF493
DROSHA
C5orf22
MAN1A1
OTUD5
AMER1
ZNF44
UBFD1
EARS2
ANAPC15
CREB3L4
ZNF91
RNF13
TRIM45
KMT5B
NRXN2
ZNF418
USF3
KMT2A
STX7
S100A16
ZBTB3
MON1B
SLF2
ZNF727
TOMM40L
ZNF77
LETM2
LTN1
SFPQ
PACSIN2
HMGN1
ARHGEF9
RCOR1
KDSR
RPL18A
SAMD4B
ZNRF2
ZNF799
YJU2
SUZ12
RNF187
TNRC18
RTN4
PAFAH1B2
BAMBI
E4F1
MED7
MCM7
AP4M1
LAMTOR4
MAD1L1
TBC1D10A
EPB41
ZBED5
MAGI1
MCU
HEXIM2
TYW1B
ZDHHC13
SUOX
USP3
SNX25
KLHL25
RUVBL2
GYS1
SURF4
NOVA1
RFX3
ZNF775
STARD5
ZNF92
RBM15
CNTN1
MZF1
CHD8
ZNF101
ASF1B
MAP2K3
PER3
RNF6
BRPF3
COL5A1
HERC3
DDX49
COPE
IL10RA
PKNOX2
HNRNPA0
ESR2
EIF1
DLGAP5
ZNF436
BBS12
PRKCI
TPRG1L
KDM4A
INPP5A
YBX1
MTHFD1
ZNF14
FAM117A
STARD7
SSR4
IDH3G
KANSL3
RSPH4A
TMEM41A
XXYLT1
BAHCC1
FGFR3
TRIQK
SPDYE14
SPDYE10P
XAB2
NOTCH2NLC
GALNT2
CDC25C
FAM53C
ID2
UPRT
TMEM170A
SPPL3
SPRYD7
RNF139
GALNT10
LAPTM4A
ONECUT2
ANO10
PTDSS1
MTERF3
PNPLA8
DNAJB1
TECR
CREB3L3
VEZT
FGD6
DEPP1
ZNF441
SLC35E2A
SOCS5
ELF2
WDR45
ZNF726
CDCA7L
KCTD2
ATP5PD
CASTOR2
PCYT1A
C19orf48
CHAF1A
TNIK
SENP5
MAP3K9
WWP1
FAM76A
CERS6
HAUS7
H2AJ
POC1B-GALNT4
ANKRD13A
MBIP
PCP4L1
DDX59
LRP10
UAP1
TSPAN4
POLR2L
SYT7
ZNF440
LUC7L2
UBE2C
ZIC3
PJA2
PSMB10
ZNF124
FAM104B
MGAT4A
ATP1A3
TCP1
MRPL18
SETD5
MIGA2
ZNF680
HEATR5A
ARHGAP39
PXMP2
POLE
SMDT1
KIAA0895L
DLL4
ZBTB25
ZBTB1
CIZ1
CSE1L
ITGB1BP1
CPSF3
OS9
NUF2
FBXO8
CEP44
LSM4
GLIPR1L2
GMNC
URB2
TAF5L
ERCC1
FUT8
ZNF430
GNAL
FAM161A
ZNF703
CGRRF1
FRA10AC1
THOC3
NSMCE1
NKX3-2
GUK1
AFF1
EPHA4
COPS3
PPP1R7
PASK
C3orf18
GRSF1
LYPLAL1
LRRC37A3
ZNF700
CDON
NOTCH2NLA
ZNF609
DNAL4
BARX2
ACAA1
GRAMD2B
ATP13A3
SRGAP2C
FAM72B
ZNF875
ZNF17
NPEPL1
ZNF66
C1orf53
NGDN
ANKRD18B
DPY19L4
KLLN
PTEN
SGSM1
OPA1
RHBDD1
PRDM9
ETFBKMT
MAP4K5
ATL1
ENTPD4
RNF144B
ZNF491
CTNNB1
IPO9
SNCB
EIF4E1B
ZFP91
LPXN
MEX3C
DTX4
COPZ1
HPCAL4
WWOX
C16orf71
ANKS3
ZMIZ2
ZNF709
NBN
NISCH
STX18
ATG101
AVPI1
SIN3A
NMT2
INCENP
CAPS2
ZNF669
POR
RBMX
GTF2IRD2B
TMEM30B
IL11RA
GNL3L
LRP12
ANOS1
ZNF354C
YARS1
S100PBP
SNX18
VAT1L
ZNF341
MBOAT2
PAF1
ZNF878
LRCH3
RBX1
PEX2
PPM1L
COQ8B
SYDE2
DPH6
SNX15
LANCL2
TESK2
ZNF195
ALDH3A2
B3GALT1
ATR
RCOR3
KAT6A
ATP6V0A2
MTCH1
RAG1
TRAF6
ZNF776
USP36
CENPN
SYNGR2
E2F6
HES4
WDR53
FBXO45
SLC44A1
B4GALT7
UBC
PMF1-BGLAP
PMF1
DGLUCY
RPS6KA5
GLRA3
LMBR1L
MKRN2
ACBD3
FAM76B
CEP57
MSMO1
SNRNP25
POLR3K
CNOT6
USP14
AFF4
EXOC6
RMC1
SWSAP1
UCKL1
FEM1A
USP30
LMO4
GBA
HEXD
MAPK1IP1L
GNB4
GOT1
TBC1D12
GPR137
HYAL2
BAD
POLG