ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728779 | THP-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◣ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

DCAF12
RLF
ZNF684
IPPK
ZMPSTE24
MTMR9
CAP1
EXO5
CD33
CCAR2
SCNM1
LYSMD1
GRPEL2
ITGB2
ZFP69B
SH3BP2
RPS19
LAMP1
ALOX5AP
NLRP12
SPATC1
NFYC
CAB39
NCF1
PGK1
LGALS8
RXRA
FCER1G
PGA4
PGA3
PNP
WDFY3
MTF2
ZNF408
ARHGAP1
ZFP69
NCF2
SETDB1
YES1
PPT1
HBS1L
MTPN
LUZP6
CD244
FAF1
RNF149
URM1
VPS33B
PGA5
STEAP4
ATP5MPL
SNRNP200
SMAP2
PPP1R12C
TLE4
XRCC5
ARHGAP30
MFSD2A
TIGD4
ARFIP1
STK36
RNF25
ARHGEF12
MEFV
MMACHC
CCDC163
POMP
VCPIP1
C8orf44-SGK3
RUBCNL
MDM4
FOXJ3
MRPS18C
HELQ
EXOSC3
TRIT1
APPL2
CEACAM21
NUF2
ITGAM
TMEM30A
IPCEF1
FEM1A
SREK1IP1
CWC27
VTA1
NMBR
CLIC5
SASS6
PISD
TTC14
PPIH
ABT1
RASA1
MRPL24
SP110
C4orf3
CARD8
MIA3
GOLGA7
MED23
ADPRS
HAUS6
NIBAN3
KIFAP3
SELENOH
MED18
MED10
IL16
OAS3
OAS2
MTRNR2L8
TEP1
ZNF780A
CD1A
RNPEP
PDCD2
NIP7
COG8
UBXN8
MTRNR2L2
UGGT1
OTUD7B
DOCK8
ARPC2
TNFAIP8L2
FAM207A
C22orf34
PIKFYVE
UBL7
TSSC4
USF1
UTP3
NUTM1
NOP10
TCF12
KBTBD7
UBR7
GON7
B3GALNT2
EPRS1
ZNF56
GTPBP10
BRIX1
UCHL5
RO60
CD53
UCKL1
NCSTN
COPA
SCAF11
INPP4B
TLR4
RPL37A
SIGLEC11
SDCCAG8
CEP170
ELOF1
CHMP4B
PIGM
IFNGR1
HIBCH
TMEM154
TFB2M
CNST
CCDC149
C6orf89
RMND1
ARMT1
DBI
C2orf76
IFRD2
STK4
NECAP2
IL1RN
PGBD4
EMC7
TCTE3
ERMARD
UBAP1
KBTBD6
EIF2D
METTL18
C1orf112
ZNF622
FAM227B
DTWD1
RPL37
HIGD2B
BBS4
PA2G4
ARPC3
TNFAIP1
IFT20
DCAF10
TBPL1
ZNF484
DENND4B
RMDN1
ATP2B4
CTSG
WDR70
INTS9
HMBOX1
ARHGEF1
TIPRL
ZNF410
TCTEX1D1
ALDOA
TRIAP1
NR3C1
DISC1
RGL1
ARPC5
SNAPC3
CHCHD5
PDLIM2
SIGLEC16
THYN1
ACAD8
MTMR14
TPRKB
XRN2
NDFIP2
EXOSC4
FBXO38
LILRA2
NUDCD1
APOL6
NOTCH2NLC
IPP
TMEM59
CMTR1
HK3
NOL11
TAF11
ANKS1A
SDHAF3
CFAP298-TCP10L
CFAP298
SKP2
LMBRD2
ADAM10
HMGB1
USPL1
ZNF226
GALK2
COPS2
TOMM20
HARS2
HARS1
AOPEP
LILRB4
TMEM208
LRRC29
EIF3D
ITGA4
ZNF658
STAU1
MRPS23
PDF
TLE1
PRPF3
KCTD5
MS4A3
FKBP1A
NOTCH2
FUCA1
SNRPC
NME7
BLZF1
VIRMA
NSUN5
EIF2B3
USP3
TPT1
TRIM35
PTK2B
SRSF11
LRRC40
ATG16L1
TPM3
TOR1AIP1
NCOA3
ERLIN2
RNGTT
ALG10
E2F4
SDHAF2
CPSF7
PKN2
PPP4R3A
ISY1-RAB43
ISY1
CBWD1
FIGNL2
KIF2C
IRAK1BP1
XRRA1
SPCS2
MRPL3
PRRG2
NOSIP
TBRG4
MRPL10
LRRC46
CUL7
THOC5
DPY19L3
TATDN1
NDUFB9
SCAF1
WDR61
CCL22
JOSD2
TMEM33
SNX3
ZNF197
KLHL20
ZC3H3
ATG5
SNAPC5
ZNF614
FAM200B
GGPS1
ARID4B
TACC1
LST1
PHACTR4
PDPR
MAGEF1
SAMHD1
GPANK1
CSNK2B
TRIP4
RTF2
SRP9
SEC22B
BOLA1
GHRL
ZNF221
SNX19
HEATR1
LYPLA2
TPK1
PHB
TBL3
INTS12
GSTCD
MOB4
BOD1L1
MYBL1
NAT10
CCT8
CMPK2
TTC13
NDUFS3
KBTBD4
DR1
PEX12
ZNF668
ZNF646
NDUFA12
SCML1
RTCA
OSCAR
NDUFA3
VPS25
GADD45B
PTTG1IP
TOR1A
SEC31A
ZFYVE1
DDX18
LAMTOR5
MTERF1
RPS20
RAB1A
ERI1
ARID2
ASXL2
CHMP5
BAG1
P3H1
TMEM43
CHCHD4
HSPA13
PEX3
ADAT2
TBC1D8B
CAVIN2
TMEM222
NUS1
ZNF224
ZNF26
GTF2H2C
GTF2H2
GTF2H3
EIF2B1
DHDDS
CHMP7
MYL5
ATP5ME
NUP133
SLC35B4
CCDC86
SNUPN
PPIE
PPIL4
WASHC5
NSMCE2
AKR1A1
ZNF398
ZNF425
TRIP11
NCF4
CCNT2
MRPS35
CSF2RB
ALG10B
MTIF2
ATG7
WDR55
TCHP
TMX3
CCDC102B
MICOS13
HSD11B1L
DUSP6
TNFSF10
CIITA
RAB44
TMTC3
CEP290
MFSD4B
RPAP3
ZNF142
BCS1L
UBAP2L
C1orf43
PPP1R8
TAF1B
RGS18
ZNF350
MMUT
CENPQ
ARHGAP18
ORMDL3
STK25
PRKCSH
CCDC151
RWDD1
SRPRA
TRAPPC8
AOAH
WNT2B
ABCF2
ABRAXAS2
GTF2H2C_2
PSMD7
PIGF
CRIPT
UNK
TMEM127
CIAO1
INO80B
VPS26C
FPR1
SYMPK
FOXA3
PSMD3
SCAND1
GNPAT
C1orf131
TRIM25
CEACAM4
IBA57
RNF139
RPL38
SPG11
PTPN4
PPP6C
UBE4A
TNPO1
MINDY3
AHI1
TERF2
PPME1
C2CD3
RBM45
SF3B1
ZC3H13
RPIA
WIPF2
SRFBP1
LARS2
PDSS2
KIZ
RAD50
RAB27B
CLPP
MRPS14
RPL5
GIMAP6
MLKL
S100A9
GTPBP2
NTAN1
MAD2L1BP
TIMM10
FAM120B
TIMM21
FBXO15
ZNF697
COX7A2
WDR7
UBLCP1
CCDC30
SYK
ZMYND12
PPCS
NOTCH2NLA
TBC1D23
CHMP1B
MAGOH
CBWD5
LATS1
SNX17
EIF2B4
DUS3L
RPL27
GET4
ARL4A
KPNA5
ATP6V1C1
ZNF3
FRG1
OTUD6B
MS4A7
C1orf74
PARP10
TMEM115
ZNF225
RPS6KB2
THEM4
CBWD3
CBWD6
PUM1
IL10RB
PHLPP1
CYB5B
SLC24A1
INTS14
SF3B5
COX16
TLN1
CREB3
ADAR
NUP42
N4BP2L2
COX5B
DCP1A
SNAP47
JMJD4
TPR
ODR4
ANXA2R
CLK2
SLC30A5
PICALM
ETNK1
CBWD2
RANBP3
ZNF318
SECISBP2L
MDN1
SLC33A1
NKIRAS1
RPL15
NCKAP1L
ZNF337
SESN1
CEP57L1
NUP58
PIGBOS1
PIGB
TMEM39B
CLASP1
PRCC
TRAK2
STRADB
C1orf109
CTNNB1
ICAM1
AHCTF1
DCLRE1B
AP4B1
COX6A1
NFKBIL1
ATP6V1G2
ETFDH
C4orf46
YTHDF2
SUCLA2
TOMM40
WDR43
ZC3HAV1
MCPH1
DESI2
RIC8B
RRS1
AP3S2
ERCC6L2
TAF12
TSN
DMAC1
RRM1
NOXA1
HAX1
PEX19
TCTEX1D2
SDSL
ELOC
GPR137
AGGF1
SRSF4
GIMAP8
DEFB1
TADA1
DNAJC16
IL6R
DBN1
ZNF444
FRA10AC1
SLC25A32
DCAF13
RPAP1
RAB10
PAFAH2
ZW10
BOD1
ZNF547
TRAPPC2B
TRMU
THAP12
GVQW3
LOC100289561
UBR1
CCT5
ATPSCKMT
RPL29
WASF1
CDC40
NUTF2
CENPT
ZNF268
MTHFD2L
BCL2A1
CLEC11A
ADSS2
THAP1
SART1
NMNAT1
LZIC
ZNF212
ABCB10
ABHD3
CD274
SKIV2L
NELFE
LUC7L2
TOR1AIP2
MRPL55
SRBD1
NDUFAB1
MRPS31
ERO1B
CYP4V2
PLPBP
MED4
DAPP1
LILRB1
ZNF140
VKORC1
LSM2
UBR2
PHF13
ZNF148
RPS12
WDFY2
GUK1
SGO2
RNF14
CCL4L2
ASNSD1
ASDURF
RALB
OR52K1
BRF2
PPP1R15B
NFE2L2
TMCO1
TTLL4
ADA2
MIER1
DNAI4
CPT2
PPCDC
RAB43
ZNF251
SLC7A6OS
PRMT7
PINX1
IFTAP
DNAJC10
CRYZL2P-SEC16B
CDK5RAP2
APH1A
METTL9
SOD2
WTAP
PACC1
CCDC15
SMIM20
KIFC1
HMGCL
PATL1
CITED4
OR4Q2
RALBP1
UBE2D3
RNF141
TBCE
LRIF1
GTF2E2
TRPM2
IL19
IL10
SPHK2
RPL18
AP2B1
SLC30A6
THAP6
KDM1A
DEF6
CCNL1
HCK
ZNF235
CFAP20
RFC2
CDC37L1
SERPINI1
PDCD10
YARS1
S100PBP
C3orf86
SLC16A3
MEN1
IPO8
MRPL45
RUFY3
MTMR6
TRMT11
P2RY6
NBR1
CCZ1B
TRAPPC4
RPS25
TBRG1
GMCL1
SP140L
STXBP3
EFHC1
IL7R
ZNF749
INTS1
DHX8
NOTCH2NLB
EEF1AKNMT
KIAA1586
GOLGA5
SLC30A7
LAMB3
PLSCR1
PRKN
PACRG
CDK4
CLN5
PEX2
TGDS
GPN2
XPC
LSM3
FAM162A
CCDC58
RPS7
RPL22
WDR36
GAR1
NEDD9
SIGLEC6
BEST1
DSTYK
IPO11
TRA2B
SLC1A5
SPRED2
PGM2
TMCO6
ACP3
TMEM101
ZNF879
OSBPL7
TFB1M
ENPP4
PCM1
PPP4R3B
EED
RBM34
RASAL3
RNF216
DHRS4
RTN3
DHRS4L2
FCAMR
RPS3
AFTPH
LINS1
ASB7
SMIM14
CC2D1B
TRIM69
ZBTB45
MVB12A
NDUFV1
RASSF5
RABGGTB
EIF3E
TRAPPC9
PPP1R12B
SERBP1
OMA1
DAB1
TRIM37
ZNF670
ST3GAL5
ADGRL2
ANGPTL2
TMEM186
PMM2
FMC1-LUC7L2
FMC1
PALB2
DCTN5
PPP4C
MAP2K1
PRRC2C
ARHGAP25
WDFY1
MMADHC
ZNF706
SLAMF7
G0S2
DGAT1
LSG1
PSMF1
SLC44A1
PRPF6
NFX1
PCYT1A
NAT1
ZSCAN30
PHIP
PKD2L2
ZNF189
MRPL50
ZSCAN32
ZNF174
ATP5MF-PTCD1
ATP5MF
VPS29
RAD9B
ATP6V0D1
TAF13
ELMO1
AMIGO2
ZNF230
UCK1
BECN1
ZBTB37
STAM2
PGS1
LEO1
CSNK1A1
POLR1F
SCP2
SMIM8
VPS13C
ABCA3
TCTN1
ARHGEF6
OPA1
KIF15
KIAA1143
MFF
PPIL3
NIF3L1
FAM222A
RC3H2
MRPL38
KLHL18
KIF9
MRPL37
CYB5RL
IFI6
COPS8
GTF3C3
RPL24
MKNK1
DDX60L
SP100
SVOP
RPA2
CCDC114
PWP1
DDX41
DYNC2I1
TMEM123
SDHB
ACVRL1
CLDND1
TMEM69
GPBP1L1
USP15
BANK1
SMAP1
REXO2
CRBN
EMC8
COX4I1
TNKS
FAM104A
C17orf80
SELL
IL18RAP
BRAP
ACAD10
RANGAP1
SH2B1
TUFM
DCAF8
CCDC88A
YWHAB
CDC42
GINS4
HSD17B11
DNAH14
IFIT3
SNRPE
CEP350
TMED5
CCDC18
RPS6
CCDC43
CEP120
GORAB
CX3CR1
ZC3H6
DMAP1
API5
LYNX1-SLURP2
LYNX1
GNAI2
S100A13
CHTOP
UBE2Q1
SYPL1
NCBP2AS2
NCBP2
UTP23
PSMD9
HPD
ZNF669
PTK6
CSPP1
MAPK14
MYH7B
GSS
BIRC5
ZNF451
CBR4
GABPA
ATP5PF
OTUD3
EEF2K
RRM2B
FBXO46
SPRYD4
DGKZ
IFI16