ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728780 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◣ SRX728780: THP-1

◢ CDK9: STRING

DCAF12
RLF
ZNF684
CCAR2
IPPK
ZMPSTE24
EXO5
CD33
SCNM1
LYSMD1
CAP1
ZFP69B
GRPEL2
MTMR9
LAMP1
SH3BP2
ALOX5AP
CAB39
ITGB2
RPS19
WDFY3
ITGAM
NLRP12
NFYC
NCF2
RXRA
NCF1
LGALS8
STEAP4
PNP
PGA3
SNRNP200
FAF1
PGK1
SPATC1
ZFP69
VTA1
NMBR
TSSC4
CD244
PPT1
HBS1L
HAUS6
ABT1
MTF2
EXOSC3
MRPS18C
HELQ
ARHGAP30
SP110
TRIT1
SETDB1
FCER1G
PGA5
RMND1
ARMT1
IPCEF1
RASA1
NUTM1
NOP10
PPIH
PGA4
MRPL24
PDLIM2
ARPC3
TMEM154
RMDN1
SNAPC3
IL16
SASS6
RNF149
NDFIP2
IFRD2
MTPN
LUZP6
NUF2
UCKL1
MTRNR2L8
POMP
ZNF408
ARHGAP1
VCPIP1
C8orf44-SGK3
UBR7
GON7
NIP7
COG8
SRSF11
LRRC40
TLE4
THYN1
ACAD8
SREK1IP1
CWC27
CARD8
MFSD2A
ARPC2
FAM207A
RNPEP
FOXJ3
CMTR1
HIBCH
ZNF410
SMAP2
MIA3
DISC1
ATP5MPL
MMACHC
CCDC163
RPL37
SLC25A32
DCAF13
FEM1A
VPS33B
UBAP2L
C1orf43
HEATR1
RWDD1
TFB2M
CNST
CEACAM21
CUL7
ATG5
TIGD4
ARFIP1
PPP1R12C
URM1
EIF3D
STK4
TRIM35
PTK2B
UBAP1
EIF2D
SELENOH
YES1
EPRS1
NOTCH2NLC
KHDRBS1
MEFV
TNFAIP8L2
ZNF484
TMEM30A
CBWD5
USF1
RUBCNL
MOB4
UBXN8
RTF2
TMEM59
HMGB1
USPL1
UCHL5
RO60
NIBAN3
TNFAIP1
IFT20
INTS9
HMBOX1
TIPRL
CHMP4B
TMEM127
CIAO1
DCP1A
PISD
OAS3
TTC14
WDR70
TOMM20
MRPS31
CD1A
DOCK8
EXOSC4
MED18
ZNF197
XRCC5
TPRKB
DCAF10
LST1
WDR55
HARS2
HARS1
CLIC5
SIGLECL1
TGFBR2
TIMM21
FBXO15
DGAT1
PEX12
SIGLEC11
MDM4
C4orf3
TTC13
INPP4B
UTP3
KIFAP3
TBL3
GTF2H2C
GTF2H2
UGGT1
ZNF696
CCL2
STK36
RNF25
ATP6V1C1
FPR1
WDPCP
MDH1
OSCAR
NDUFA3
MYBL1
CBWD1
SLC33A1
NECAP2
RPL8
ADPRS
CTSG
CCL4L2
NFKBIL1
ATP6V1G2
SCAF11
ARHGEF1
C6orf89
THAP6
CCT8
UBLCP1
IFNGR1
KBTBD6
NDUFS3
KBTBD4
ZNF622
FKBP1A
VPS25
RGL1
ARPC5
FCAMR
NOXA1
MRPS23
EIF2B3
NSUN5
PRPF3
RNF141
RAC2
SNX19
DR1
HAX1
ASXL2
RTCA
ATG16L1
PDCD2
B3GALNT2
PIGM
TCF12
P3H1
PPP1R12B
WNT2B
SDCCAG8
CEP170
N4BP2L2
PEX3
ADAT2
GOLGA7
NOL11
AOPEP
CBWD2
SDHAF3
MTRNR2L2
PKD2L2
OTUD7B
DENND4B
SCAF1
RRS1
TADA1
PIGU
GOSR1
MTMR14
GALK2
COPS2
TPK1
NOTCH2NLA
AGGF1
ARHGEF12
FUCA1
SLC35B4
AKR1A1
CALCOCO1
ZFYVE1
TRIP4
PIKFYVE
FBXO46
PSMD7
FAM120B
TOR4A
APPL2
MRPL10
LRRC46
SF3B1
RALB
E2F4
ACAD9
TATDN1
NDUFB9
ZNF780A
CEP350
CHCHD5
SNX3
GOLGA5
ZNF56
PACC1
ACVRL1
PIGBOS1
PIGB
WDR61
TCTEX1D1
STAU1
TMEM186
PMM2
ZNF331
PHACTR4
NOB1
TAF11
PRKAB1
CSF2RB
SIGLEC16
THOC5
NME7
BLZF1
STARD6
C18orf54
CCNL1
CLPP
GET4
C1orf74
SLC22A16
UCK1
FAM227B
DTWD1
THAP12
GVQW3
CBWD3
SLC24A1
INTS14
TBPL1
PDPR
PA2G4
SNRPC
TAF12
ZNF142
BCS1L
GSPT1
ZNF337
ITGAL
MRPL17
KBTBD7
IPO8
XRN2
SRSF4
NOL6
IBA57
SYMPK
FOXA3
UBL7
TERF2
OPA1
NFX1
THOC3
LOC100289561
DESI2
TPM3
TLE1
GPR68
UBR1
WIPF2
INTS1
CXXC1
KATNBL1
MAN1B1
TOR1AIP1
ARHGAP25
JOSD2
RPL37A
GTPBP10
RPS6KA1
PPCDC
HK3
PHB
ORMDL3
BRIX1
YKT6
ELOF1
S100A2
FITM2
RPL27
DYNC2H1
DUSP6
DBI
C2orf76
DNAJC16
NAPG
TAF13
ATP5PO
RAD50
CITED4
LAMTOR5
PDF
HDDC2
PICALM
CCDC149
GUK1
RANBP3
HSPA13
PGBD4
EMC7
NLRP3
LILRA2
MRFAP1
IRAK1BP1
CFAP298-TCP10L
CFAP298
GLI4
WDFY2
TPT1
C22orf34
GTF2H2C_2
SSNA1
ANAPC2
CCDC30
OAS2
LYPLAL1
SPG11
ZMYND12
PPCS
AP2B1
NCSTN
COPA
SLC31A1
FKBP15
OCSTAMP
ZNF668
ZNF646
SF3A3
CIAO3
MED10
SLC37A4
CRTC2
TBC1D23
NUP133
MDN1
PUM1
ADAM10
RAB1A
TSN
HUS1
MTFR1
KCTD5
RNF14
TMX1
MLKL
AFG1L
RRM1
SF3B5
CCDC114
CEACAM4
RPIA
MEF2C
BOD1L1
TCTE3
ERMARD
IL7R
CALR3
C19orf44
AHCTF1
TLN1
CREB3
ZCWPW2
AZI2
NUP58
RPL29
RPS16
NR3C1
PPME1
C2CD3
TRAPPC4
RPS25
TOMM6
ZNF697
APH1A
RGPD2
RGPD1
VPS26C
RPL5
VCPKMT
BOD1
COPB1
ANXA2R
OBI1
ACP3
BOLA1
ADSS2
ETNK1
TRMT11
GOPC
DNAJC10
CTU1
GTF2B
CCL22
MRPL55
FRG1
DNAH14
SIGLEC6
CUTA
GNPAT
C1orf131
ATG7
CSNK1A1
MED23
RPL22
SART1
ZNF614
SRP9
NBR1
USP3
SLC1A5
GIMAP8
ZNF350
CTDP1
ZW10
SRPRA
MRPS35
OCIAD1
CATSPERE
SNAP47
JMJD4
KIF15
KIAA1143
CBWD6
RAB44
UBE2V1
DHDDS
IL1RN
PARVB
PPP2CB
ZC3H6
ADAM17
TRIM37
SNX17
EIF2B4
LTA4H
RSL24D1
XRRA1
SPCS2
NUP155
MTMR6
S100A9
PUM3
SH2B1
TUFM
VIRMA
SEC14L1
LAPTM5
GTF2E2
CLEC16A
CNOT1
NKIRAS1
RPL15
SKP2
LMBRD2
NOTCH2NLB
SNAPC5
MEN1
CHMP7
EEF1AKNMT
TRIP11
FIGNL2
ARID2
COPS8
CTNNB1
TBRG1
MED4
ZNF12
NUDCD1
RIC8B
ZNF140
RPL36
GZF1
NDUFC1
NAA15
CHMP5
BAG1
CCDC146
GGPS1
ARID4B
LTN1
ZNF318
ABCD3
RPS7
PPP1R11
CGAS
TNNI2
LILRB4
USP15
ZNF221
MRPL44
ZNF397
DCPS
ABCA3
RPS20
HIGD2B
BBS4
IL6R
RPL38
COX7A2
DDX41
ORC5
TLR4
AHI1
OR4Q2
CCDC150
RPL11
ZNF354B
EMC8
COX4I1
RNF216
INPP5D
POLN
HAUS3
APOL2
GBA
RC3H2
TRIM25
PRRG2
NOSIP
MCOLN1
LYNX1-SLURP2
LYNX1
EED
BHLHE40
THRAP3
KIAA1586
SYK
NSMCE3
GHRL
ZNF26
BRF2
PSMB1
TBP
LONP2
ABCC11
DAB2
TMEM208
LRRC29
NDUFS2
SEC22B
TRIAP1
CTTN
CNPY3
LIN54
PNPLA6
PPP6C
IPO13
LTO1
ERI1
MAK16
LATS1
PTK6
POM121
EFHC1
CD53
NCBP2AS2
NCBP2
SLC44A1
CRBN
PSMD9
HPD
YWHAB
NDUFAF6
SGO2
PSMA6
SLC35F5
AVIL
ZNF225
GTPBP2
MAD2L1BP
PCBP2
UTP23
CTR9
CDC42
NCKAP1L
LILRA1
ZNF567
NOTCH2
ABCB10
ATP2B4
WDR7
TRMT61B
KIF2C
MAGEF1
TESK1
CNIH4
UFL1
PTTG1IP
OAS1
ZNF230
INTS12
GSTCD
SEC13
TOMM7
YTHDF1
MRPL16
DAXX
GABPA
ATP5PF
SLA
GNAI3
FAM185A
KLHL20
WDR36
ZNF354C
SMIM26
ZC3HAV1
NPRL3
SLC30A7
SLC7A6OS
PRMT7
ST7L
CAPZA1
AGT
SSBP1
TPR
ODR4
TAF1B
ZNF549
TCHP
WSB1
DDX23
ZC3H11A
ALG10B
SKIV2L
NELFE
TOMM22
CEP63
ANAPC13
WASHC5
NSMCE2
FAU
NCF4
DEDD
SNU13
SPRTN
EXOC8
UQCRC1
TM6SF1
IFITM2
NAPB
ZNF212
RNF139
KATNA1
UBE2Q1
DUS3L
VKORC1
GON4L
UNC50
COA5
PPIL4
MRPL45
SRBD1
SPHK2
RPL18
TMEM222
DDX18
NDUFV1
ERLIN2
DNTTIP2
FAM200B
STAT2
AP3B1
TEP1
BCL2A1
RRP15
TRIM46
KRTCAP2
SAMD4B
MED15
PPP1R15B
ATP6V0B
WDFY1
ICAM1
PROS1
ZNF189
MRPL50
NDUFAB1
TIGD6
HMGXB3
FBXW2
PKN2
HMGCL
SHPRH
DHX15
TTC33
ZNF721
PIGG
MTERF1
TAB1
SMIM15
TCTEX1D2
TMTC3
CEP290
RBM6
AMD1
CDK19
SNRPD3
GUCD1
TRMU
OSBPL7
GIT2
TMED4
MIDEAS
PPIP5K2
GIN1
CTNNBL1
FAM32A
NBN
PKD1
TNFSF10
FCHO2
ZNF224
TOR1A
CCPG1
C15orf65
RPL6
DCAF8
PPP1R8
NUDT9
TRAF3IP3
MAPKAP1
IKBIP
APAF1
RAB3C
SUCO
RBM15B
LYPLA2
ATP9B
CHEK1
TNPO1
PEX6
SKAP2
QTRT2
CCDC191
ALG10
FBXO38
MRPS10
IPP
ZNF226
CCNT2
TMEM248
TSEN15
SDHAF2
CPSF7
EXOSC6
SDHB
EIF1
ANGEL1
MED20
BYSL
DHX34
HNRNPU
MICOS13
HSD11B1L
WDR53
FBXO45
TMED5
CCDC18
TIGD1
EIF4E2
SNUPN
POLR3E
NBPF1
ITGB1BP1
CPSF3
MARS1
ARHGAP9
PIGC
TNFRSF10A
MINDY2
PHF1
PARP10
ZNF398
ZNF425
CCDC15
MINDY3
SEC31A
WFDC3
DNTTIP1
RBM34
KIZ
OTUD6B
HINT1
ZNF148
BAX
NOC4L
DDX51
MFF
KDM1A
ISY1-RAB43
ISY1
KIF22
SLFN13
TMEM43
CHCHD4
PRKCSH
CCDC151
ZNF268
ORC4
MBD5
BRMS1
CRB1
RPAP3
VPS13C
PPP2CA
BATF2
PRCC
ZNF134
ASB6
SESN1
CEP57L1
LUC7L2
MFN2
FMC1-LUC7L2
FMC1
ZNF669
POLR1E
PIGF
CRIPT
CCL4
SIGLEC14
ZNF658
POLI
ZNF846
SMPD3
ABCF2
EIF2S2
DHX8
TATDN3
NSL1
POMZP3
SPDYE14
SPDYE10P
TBRG4
TRAPPC8
FNTA
KIFC1
NIPBL
IMPA1
PPP1R12A
IFI6
HIKESHI
CDK4
DCLRE1B
AP4B1
SRSF5
LSM2
METTL18
C1orf112
GTF2H3
EIF2B1
RPL22L1
NUP42
IFTAP
PSMC1
PRMT2
EEF2K
CSRP1
COX6A1
TCTN1
AP2S1
SURF6
LARS2
NXF1
EIF4ENIF1
GSN
RAB14
RBBP5
ETFDH
C4orf46
SDE2
GORASP2
TTLL4
ATP5MC2
RBM45
TKFC
DDB1
PPID
PKN1
PCDH20
DMAP1
UBA6
C2CD5
CLN5
PRRC2C
MIER1
CKS2