ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637469 | MOLT-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◣ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

CALCOCO1
TMEM115
IFRD2
TCEA2
FEM1A
CALR3
C19orf44
TSNAXIP1
RANBP10
SMPD3
MRPL24
BTRC
MMACHC
CCDC163
PHB
NUDCD1
UCKL1
CLPB
PRCC
AP2S1
KBTBD6
ATP2C1
C1orf159
ST3GAL2
KBTBD7
PNKD
AAMP
HIKESHI
PI16
GTF2H4
PKIG
MICOS13
HSD11B1L
HHIP
GSPT1
SCNM1
LYSMD1
PAFAH2
ING3
CHMP4B
PHF12
AHCYL2
CCDC146
SLC4A2
CDK5
WDPCP
MDH1
ZFYVE1
BOD1
NPRL2
CYB561D2
PPP1R16B
BANP
INTS9
HMBOX1
PEMT
GTPBP2
MAD2L1BP
CALR
C3orf86
UBR2
PPRC1
PPP1R12C
LZTFL1
SCAF1
LST1
CRTC2
CHCHD2
ZNF331
STAU2
ALDH1A2
ZNF225
IQGAP2
NTAN1
UNK
UBQLN4
LAMTOR2
ZNF444
KCTD9
CDCA2
ACTR1A
SUFU
CD1A
H2AZ2
CXCR4
ZNF140
ITGA4
VCPIP1
C8orf44-SGK3
RBL1
CTU1
TSSC4
TMTC3
CEP290
DSTYK
PHF13
HECTD1
GATB
VIPAS39
AHSA1
C12orf57
SLC35B4
FXYD2
PANK4
KMT2B
MSL2
ZNF337
INVS
ERP44
EPHX2
WDR74
SHQ1
TLR9
SYMPK
FOXA3
VPS50
HEPACAM2
DCLK3
ZSCAN22
PSMF1
NBEAL2
OR10T2
TIMM21
FBXO15
BIRC5
FAM193A
DUS3L
LARS1
FBXO48
APLF
DDX23
RIC8B
FBXO46
LAT
RANGAP1
ARHGAP24
DCAKD
NMT1
FBXL19
PPP1R12B
MAP1LC3B2
GFUS
RABAC1
KRTAP16-1
ZFYVE19
DNAJC17
RPS7
LDLRAD4
RGL4
WNK1
C16orf91
RAB37
CCDC90B
UTP3
TGM6
N4BP2L2
JOSD2
GPKOW
MED23
ZNF500
CCM2
H6PD
THYN1
ACAD8
BNIP3L
CCDC114
FBXW11
MX2
ELOC
TNFAIP1
IFT20
NUF2
ABCF2
MND1
SOX6
C11orf58
PRPF40B
LAIR1
TNFRSF4
TFEB
GSK3A
BUB1B
RETNLB
SCRIB
STK25
DFFA
SNX17
EIF2B4
RPIA
CHCHD3
COX7C
SMARCAL1
RFX8
TSC1
GFI1B
SSBP1
ORMDL3
AP2M1
CAPN15
POLDIP3
CDK8
SIRT2
NFKBIB
SIRT4
ZNF165
NSFL1C
PRRG2
NOSIP
SLC47A1
HSPA13
MRPS18C
HELQ
ZNF354C
PEX3
ADAT2
ARHGEF3
BORCS7
DESI2
DEGS1
TRAF3IP3
H4C12
SLC33A1
TES
MYO1G
FAM222A
STAU1
TMEM245
PTCRA
RTTN
ZNF605
ICAM2
AURKAIP1
ARHGAP4
ZNF335
COPS4
CLEC16A
ZNF354A
PTK2
RPGRIP1L
FTO
MED15
ZNF230
NME1-NME2
NME1
CCP110
SLA
FASTKD1
MFAP4
SMO
ALG10B
TMEM59
TTI2
GZMA
CDK5RAP1
KRR1
ATXN7
MRPL1
IPO4
PEX26
HEMGN
CFAP20
ADORA2A
EIF3F
INTS12
GSTCD
WDR87
SIPA1L3
TFPT
PRPF31
EPHA1
NEIL3
MTF2
SF3A3
DYNC1I2
PHF23
TTC13
TTC33
ZNF749
GPANK1
CSNK2B
COX16
MKRN3
STAP1
ZNF133
REPIN1
AQP3
FAM185A
ASXL1
FIGNL2
CCDC150
RPS20
WBP2
FAM228B
SF3B6
SPC25
TRAPPC3
RAB1A
RPP40
TRIP4
ATAD2
TMC8
NET1
ZNF56
NDUFS7
ALG10
PLAAT5
SLC25A19
ZNF408
ARHGAP1
TMEM101
CCAR2
ARHGEF18
CD3E
AKIRIN2
PSMD11
TBC1D31
DUSP2
RIPK4
SNAPC3
ZBTB45
BRF2
ZNF350
CTDP1
CHMP7
MARS1
ARHGAP9
TLR6
ZNF224
SNRPD3
GUCD1
EPSTI1
MAMSTR
NFKBIZ
NR1H2
C19orf53
NUDT13
CIC
CCNG2
BICD2
TMEM127
CIAO1
NOP16
HIGD2A
LCK
RPL18A
PPIP5K2
GIN1
YIPF2
TIMM29
CLP1
ZNF226
ZNF354B
CYB561
DBNDD1
NOP14
GRK4
PA2G4
ZMAT5
UQCR10
ASAP1
MTMR9
NUCB2
TLE4
DCP1A
ZNF595
CNOT4
MYLK4
LTA4H
BUB3
JRK
IDNK
USP48
ZNF169
RALGAPA2
CLIC1
ZFYVE28
CFAP99
REXO4
TSC22D4
BPI
CIAO2A
ENOX2
MBNL1
TMEM229B
SMUG1
RPL29
FKBP5
RPS26
TNPO3
RPL23A
NUTF2
CENPT
STX18
ZNF548
HIF1AN
ZNF101
MRPS31
ZCCHC8
MEN1
ESCO2
TCF7
WDR24
NDUFS3
KBTBD4
H4C15
H4C14
ASNS
KCNA2
MKNK1
DFFB
CEP104
ZNF652
SUGP1
MAU2
NUP107
MAX
TOR1AIP1
ZNF527
RPL27
RPS13
DLC1
FAM168A
AGK
ADGRE2
ZSWIM9
LIG1
LSG1
S100A5
RBM6
GALK2
COPS2
CDK5RAP2
VPS41
TSC2
NTHL1
OSCAR
NDUFA3
ZNF343
ATP5MF-PTCD1
ATP5MF
NSA2
GFM2
C17orf75
ZNF821
COPS7B
PDE6D
ZNF37A
H4C3
FAM163B
FNDC11
TMEM41A
MITD1
CYP2U1
CLDND1
ZNF420
HDAC7
TRAF7
ETFDH
C4orf46
DAAM1
KCTD5
MICAL1
MLEC
UBAC1
ATP2A3
TMEM258
FEN1
PRKCI
TMEM208
LRRC29
MYL6B
NIBAN3
LMNB2
AQR
ZNF688
ITGAL
TMEM102
RTEL1
ALKBH3
RBBP5
DPY19L4
SNRPB
ZW10
ITGB3BP
EFCAB7
FDPS
MRPL44
SDE2
NOTCH2NLC
RALBP1
LYST
GRAP2
C16orf54
USP30
ZC3HC1
GTPBP3
ZGPAT
ARFRP1
MGRN1
CLTC
LRRC1
DTHD1
ING4
PANK3
AOAH
ATP5F1D
SLC39A3
TOX
RAB30
AAR2
SUPT7L
SLC4A1AP
STING1
THEMIS
ARHGAP45
CD2AP
TBX6
RNF125
PIGU
NCLN
PSD4
CHRNA3
FAM207A
KBTBD8
VKORC1
CCNI
PNPLA6
ARHGAP19
RASAL3
S100Z
TOMM40
GABPB2
SLC26A11
SGSH
VPREB1
CNIH4
NDUFB3
FAM126B
HEXIM2
LETM1
IL21R
SLC7A8
DRG2
PIH1D2
NKAPD1
RAB5C
NRDE2
MFSD3
ZNF189
MRPL50
NUMA1
LRTOMT
ZNF570
ZNF569
TMEM199
POLDIP2
RBM28
TAB2
C12orf43
RUVBL1
TUT1
CST7
NUCB1
BMS1
GRHL3
NUP54
LTN1
TMEM160
LIN37
ZNF26
DHX33
KIF15
KIAA1143
GPR137
PUM3
RAB27B
SOAT2
CASP8
EMSY
PPP2R5B
KLHL20
DHX8
PPP5D1
CALM3
ZSCAN5A
MRPS23
C1orf109
CDCA8
DCAF10
ZNF277
DOCK4
HSCB
CHEK2
MTBP
MRPL13
SVIP
ZCCHC4
IQGAP3
ABCB8
LOC388282
LAX1
APOBR
ZNF805
ATP5PO
SELENOH
CFL1
SMG8
PTPN22
PTPRCAP
SERPINI1
PDCD10
THRAP3
CTF1
SEC11C
ANKRD40
UBE3B
CCDC88B
DGAT1
ZNF45
MRPS16
ZNF451
CXCR3
ASCL4
RACGAP1
TCF3
CD3D
UBL7
DMAP1
ARL17B
ARL17A
VRK1
STAT1
CUEDC1
C15orf62
TRAK2
STRADB
COMMD2
ZNF32
TRMT6
MCM8
PEAK1
HMG20A
SF3B5
EIF4A2
POLR3B
ARHGDIB
SAMD3
L3MBTL2
TM9SF4
STARD10
WRNIP1
TERF2
PPP1R13L
POLR1G
TTC4
LRP6
GAS7
GSTA4
TNFSF4
TBL3
MED11
TARBP2
GTSE1
TMEM123
UTRN
CDC14B
TRAF3IP2
INO80B
ZNF235
UFSP2
BOLA1
ANAPC5
ZC3H6
ZNF419
NEDD8-MDP1
NEDD8
GMPR2
DIABLO
SEC13
TBC1D19
PRAF2
SDCCAG8
CEP170
CDC6
FAM8A1
SNAP47
JMJD4
SYNGR4
MRPL3
PIKFYVE
HEMK1
CWC22
SNRPC
PRDM1
METTL7A
TRAT1
ZNF850
SEC22B
HNRNPA1L2
CALM2
WDR83OS
WDR83
BUB1
OR10P1
CCDC174
HSPH1
RNASEH2C
GOLGA3
WDR46
PFDN6
TRUB2
COQ4
AP1G1
METTL18
C1orf112
PRSS23
PCM1
IL17RE
LUC7L
PHB2
TXNDC9
EIF5B
SETMAR
UMODL1
NKD1
ASIP
UBASH3A
MCAT
RPS6KB2
NR1H3
ACP2
RUFY3
FIS1
MAF1
TOP3B
ADAMTSL2
B3GALNT2
STRA6
SKP2
LMBRD2
GTF2H2C_2
GTF2H2
EXOSC4
TMEM222
SEL1L
CPPED1
CAND1
TRMT1L
SWT1
EXO1
CASS4
HUS1
TMEM94
COMMD9
CSTF2T
EVI5L
ITK
IGF1
SESN1
EIF2D
CEP57L1
LRRC45
CENPX
UBXN8
H4C11
IRF8
MB
WASF1
CDC40
SEPTIN9
METTL26
WRAP53
TP53
MC1R
NUP153
LATS1
HBP1
DARS2
CENPL
ZMPSTE24
PGM2L1
SLC25A51
PLK1
IL10RA
PES1
CCPG1
C15orf65
PPFIBP2
AGAP2
NELFB
CCDC88A
CEP97
EDC4
ACOT7
EIF3D
YJU2
MEF2C
RPL22
KCNN3
UTP11
H4C8
SLC32A1
TOR2A
TATDN3
NSL1
CCDC77
NPY
SPHK2
RPL18
CNPY2
MCM7
AP4M1
RAB29
AP2B1
ZNF302
TACO1
AMD1
CDK19
PTRHD1
CENPO
ZNF529
DNAH7
APH1A
RAD54L2
METTL17
ETFB
METTL11B
IL9R
ZNF565
ZNF146
PPME1
C2CD3
TUBGCP3
CD28
RPS19
MRPL16
ADARB1
GALM
RNF220
DDX49
COPE
SCAMP4
ADAT3
GTF2H2C
SCAND1
VTA1
NMBR
ZDHHC14
USP35
KCTD21
LRRC37A3
TMED9
IWS1
ESPL1
PBXIP1
GAD2
ABLIM2
WDR11
DNAJB4
CD48
SLC24A1
INTS14
TAF3
ZBED4
ZSCAN32
ZNF174
GCSAML
KAT7
MED24
REXO2
MTRF1
MRPL39
CAPN10
ZNF416
ANTKMT
TMEM43
CHCHD4
NOLC1
PSMB6
RAD52
POLR2J3
TTC26
CXCR5
ZNF227
TMEM33
MPHOSPH10
MCEE
GPR68
MMRN1
TIAL1
BRWD1
CTHRC1
VPS25
SUGCT
MPLKIP
TMEM186
PMM2
PALD1
QTRT2
CCDC191
PMVK
VPS37C
LOC105370980
NMNAT1
LZIC
ZNF461
HIRIP3
TIMM22
SDHAF3
HMGB1
USPL1
UBC
RPL8
GBA
MORC3
POLRMT
CCNL1
PSMD3
MRTO4
EMC1
INTS5
IST1
EXOC4
MTIF2
VIRMA
SASS6
EVL
SAP30BP
RECQL5
FOXP1
TBC1D13
SLX4IP
POU2AF1
ZNF599
CEP152
DOCK10
ZNF584
HSPE1-MOB4
HSPE1
HSPD1
TMEM242
WDR36
LAS1L
POLK
CERT1
CLDN12
CKAP2L
SLC39A13
TMEM109
ZER1
DPEP2
LGALS2
ZFPL1
CDCA5
THAP1
MRPL48
VPS13B
TCF12
USP15
KRI1
TIMM23
ZNF473
VRK3
ZNF391
ARMH3
SGSM3
H4C4
SLC39A8
SSH2
AP3S2
ZNF384
INTS4
ACP6
KDM4D
CWC15
TPD52L2
PIK3CG
CWC25
RPS3A
RPLP2
TEFM
OGT
FBXO25
EIF1AD
BANF1
ARHGAP30
ZDHHC16
EXOSC1
PUS10
PEX13
RGL2
TMED5
CCDC18
SNIP1
PARP2
IPPK
METTL3
SMN2
SMN1
ZSCAN20