ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501661 | A-375
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◣ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

GSTA4
H4C15
H4C14
MTRNR2L2
NUF2
MTRNR2L8
FRA10AC1
EIF2D
DSTYK
GBA
DCP1A
TRIP4
S100A2
H1-2
RAD54L2
STX16
DRG2
HMGB1
USPL1
CDK5RAP1
RBBP5
TBC1D19
POLDIP3
SCAND1
CWC25
SF3A3
NDUFS3
KBTBD4
H4C11
RPL37
SMARCD2
DHX8
RPS7
SAR1B
TBL3
WDR74
ATP5MC2
STX18
H1-3
S100A16
CTNNB1
AP3S2
NME1-NME2
NME1
SLC24A1
INTS14
TRIAP1
MRPS23
H2BC21
H2AC20
H2AC21
RCAN1
PLEKHM3
MTF2
GEMIN7
CCNL1
UTP3
ZBTB45
SELENOH
RGPD2
RGPD1
TTC26
CRB1
NBPF1
UCKL1
DMAP1
BNIP1
H2BC18
H3C13
SECISBP2L
MAN2C1
H2AC19
H2AC18
MLEC
MITD1
RPS6
SERPINE2
GTF2H2C_2
GTF2H2C
SSBP1
RAB5IF
STAT3
ERCC1
DPP9
TATDN3
NSL1
FAM3C
AURKAIP1
TUT1
WDR36
YWHAE
PPP6R1
YIPF2
TIMM29
LRRC37A3
H4C6
LAMP1
RPS2
MYO9B
HAUS8
INTS12
GSTCD
GTF2H2
ATF6
SMG8
NOB1
TSEN15
RPL12
LRSAM1
EFCAB2
NPAS4
PSMF1
PSMD3
FOXJ3
TBC1D13
RBM15B
SNAP47
JMJD4
POLG
MDM4
H1-4
LY6K
RPS27
RARS1
TBL1X
ALG10B
NDUFAF1
PDCD6
H3C3
MRPL21
IGHMBP2
RPS20
C17orf75
DDIT4
JRK
C12orf57
MRPL16
KBTBD6
UBQLN4
LAMTOR2
GTF3C3
RANBP2
KMT2C
H4C12
TACO1
TMEM222
FRG1
SAMD4B
SCNM1
LYSMD1
TCEA2
NR1H2
SDHAF3
CDC73
U2SURP
ZNFX1
FAM227B
DTWD1
NOC4L
DDX51
KNL1
CALHM2
COMMD9
ATP5MPL
SRSF4
CALCOCO1
FAM98B
CCDC59
KDM1A
GNAI2
COMMD2
H3C15
H3C14
MED23
LARS2
PMS2
AIMP2
TAGLN2
MKRN2
SSBP2
SEC13
ZER1
NDUFC2-KCTD14
NDUFC2
FXYD3
CCDC90B
SLC44A1
SLC35E2B
GAPDH
SPRY4
KLHL12
NSFL1C
NUP107
NOTCH2NLC
COX5A
TSSK6
NDUFA13
MRPL38
SIRT4
MAPK1IP1L
METTL9
TAMM41
ZBTB37
CLUAP1
USP3
NDUFA12
TMED2
NKIRAS1
RPL15
RUVBL1
CDKN2AIPNL
NCBP3
SLC25A32
DCAF13
NOTCH2NLB
TSPAN10
NPLOC4
CDK2AP1
TSC2
NTHL1
MTIF2
HEXIM1
TVP23B
MRPL58
KRR1
DDX1
ANP32E
PRKCE
MED18
DCAF10
IQCH
AAGAB
USP4
DFFA
RPS3
WDR24
DNAJC24
DCDC1
UBOX5
FASTKD5
COQ8B
GALK2
COPS2
AGK
SLC25A51
KANSL3
YWHAZ
SNRPE
TTC1
SNRPB
HEATR1
PPRC1
INTS1
NMNAT1
LZIC
ARL14EP
PHLDA1
KDM8
PEMT
CIAO3
NLE1
H4C5
ADPRHL1
ZNF212
CUL4A
PCID2
SACM1L
NFE2L2
ID1
SEC16B
PSMD11
WASHC4
RPS28
NDUFA7
VPS25
POMP
UQCC1
SLC20A1
STARD4
MRPL53
KLLN
PTEN
MAT2A
INTS5
ITFG2
RINT1
H4C4
VPS4A
TTPAL
USP30
DPY19L4
H3C8
SNAPC5
MRPL1
AAR2
PSMD9
HPD
CALM2
CCDC88A
R3HDM2
H2BC8
H2AC8
NUP153
MBTPS2
H4C2
PANK4
ZSCAN22
TOR1AIP1
MRPL19
YARS1
S100PBP
ASB6
CCDC15
LONP2
ABCC11
EIF3E
MICALL1
ST3GAL2
UBL7
ATP5MF-PTCD1
ATP5MF
NSA2
GFM2
RHOT2
RAD23A
AP5Z1
POLR2J3
PRKCSH
CCDC151
SSNA1
ANAPC2
TTC4
VTA1
NMBR
DDX59
ZBTB40
ZC3HC1
TMEM242
COIL
UBA2
PDE8A
ARL2BP
FBXO46
CCAR2
ZCCHC4
WIZ
CREBL2
WASHC2A
BUD13
RMDN2
H4C9
EEF2K
TRMU
FBXW2
ANXA2R
CALM1
ALDOA
EPHA3
SPRY2
ELAVL2
BANP
TTI2
HDGF
H4C3
MRPL40
HIRA
ATXN2L
CCDC174
LZTR1
ELK4
H3C2
ZNF594
VPS33A
GORAB
SLC25A13
SNRPB2
NCOA3
GARS1
SLC25A45
PRRG2
NOSIP
TMEM199
POLDIP2
PPIP5K2
GIN1
PARK7
SLC35E1
ZNF3
CHD1L
DPH7
GOSR1
NRF1
PRKAB2
MRPL10
LRRC46
MACROH2A1
B3GAT3
OGT
TRMO
H2BC17
H2AC17
H3-2
PSPC1
RPL27
G6PC3
STAT1
TRMT61B
BBS1
GOT2
PA2G4
SLC35E2A
TRPC4AP
ATR
H4C8
AP3B1
TRIM62
INO80B
TIMM22
CATSPERG
SMG7
NECAP2
RPL10
ZMPSTE24
SLC39A13
KIF15
KIAA1143
LDAH
ECSIT
TCHP
MTMR2
E2F6
NUP188
DOLK
CSNK1G3
ALDH7A1
TSNAX
TEFM
PARP2
CCDC125
TMEM101
UCHL5
RO60
KLHL20
ZSCAN25
CDK12
RNF168
ZNF106
WWTR1
DHRS3
MRPL24
PAFAH2
ZNF26
AP2B1
MRPS31
SRRT
MFAP3
FAM114A2
ERLEC1
ASB3
ZNF770
DISC1
IFNAR1
EXOSC8
CALR3
C19orf44
SH2B1
SMG5
TUFM
NOTCH2NLA
PDE12
TAS1R1
NOL9
CASC3
BFSP1
CT45A9
CT45A8
CT45A2
MRPS15
VPS72
EPRS1
POLR3E
C1orf53
KEAP1
PRCC
PPP6C
COG2
ZC3H10
FAM149B1
ECD
SEC22B
AGMO
SART1
NFKB2
USE1
SYT5
LRRC59
AP1G1
H2BC11
H2AC11
TSG101
COPS6
RRP9
PARP3
ZNF185
EIF3H
CENPBD1
BCAT2
LIMA1
AMOTL1
USP48
GID4
ATPAF2
RPS3A
ZNF721
PIGG
LRWD1
ALKBH4
IPO4
MRPS14
NME6
COQ5
PYGB
AXL
FBXO38
ZNF668
ZNF646
PCBP2
PRPF6
CNOT2
SRSF7
MUL1
TPT1
NAGK
KRT18
CHMP4B
DDX23
COX7C
RPL29
AQR
DR1
NOC3L
AVPI1
FOSL1
NDUFS7
FANCD2
PPID
LENG8
H2BC4
H2AC6
AMACR
PRDM5
IPPK
SLX1B
SLX1A
BOLA2B
BOLA2
SASS6
ADPRS
COMMD1
MCOLN1
DDX46
RUSF1
FOXO3B
ATP6V0D1
ILF2
DUSP6
TOB1
HNRNPU
SMIM14
ILVBL
TFB1M
LRATD2
SCRIB
STIP1
PRDX1
TTC32
OCEL1
DPY30
HTR5A
CCDC124
GPS2
CBX5
HNRNPA1
TSR3
GNPTG
NOTCH2
BRMS1
GPAM
RPL41
SPRED2
H2BC14
H2AC14
TOP3B
ARL8B
NOL11
TRMT6
MCM8
COQ9
CIAPIN1
SEC14L1
MRPS24
PPP4R3A
RFFL
WDR13
C1QTNF3
ING4
TOMM22
THOC5
STYXL1
VPS28
SEC11A
LDHA
RPL7
RDH10
ATRN
FGFBP3
COPS4
S100A13
CHTOP
TMEM126A
PRR19
PAFAH1B3
FAF1
HSPA8
TMPRSS5
PIGU
RAD52
TFRC
CWF19L1
H2BC13
H2AC13
CSRNP1
MAML3
PNPLA6
BABAM1
RPTOR
STOML2
TIGD6
HMGXB3
MPHOSPH10
MCEE
TOMM7
TEX261
SCO1
ADPRM
AAAS
TRIM46
KRTCAP2
FEM1B
STT3B
RIN1
SNX17
EIF2B4
ZNF350
RPS6KB2
CSDE1
HSPA9
EEF1A1
MDN1
C16orf72
DMTF1
KXD1
DBR1
DSN1
YJU2
BMS1
PKIG
TRMT10C
ALG14
NUCKS1
CSTF1
AURKA
ARHGEF12
ARHGEF7
TRNAU1AP
NCOA7
MSANTD2
SRSF10
TP53I3
SMN2
SMN1
ZNF148
NDUFAB1
DNAJB12
RPL24
WASHC2C
C11orf49
MRPL4
ANKRD13D
HIPK1
ZNF410
MNAT1
PARN
COPS7A
RBM28
VPS35L
CLUH
TDG
RPL7A
MED22
RAD9A
ICE2
TMEM179B
AGL
ADORA2B
FAM228B
SF3B6
FAM168A
CEP350
SMIM12
EFTUD2
CCDC103
RFC2
MRPS21
MRFAP1
ISG20
CYB561
DYNLRB2
LRRC49
PLK2
THAP10
C19orf53
TMEM208
LRRC29
PEX3
ADAT2
RPL38
AP5S1
CCT4
DCAF8
NUP133
TRMT1
RPL30
H3C4
MAD1L1
SUMF2
UBE2R2
CAMKK1
RAB7B
CUEDC2
ADAR
ZNF518A
MAZ
FAM200B
TMEM62
SLC12A2
UQCRB
SH3TC1
CASZ1
LUC7L
MIA3
KPTN
SRFBP1
ANKRD54
ZNF658
EIF3L
TOB2
TMEM168
PUM2
GTF2H4
PEX12
TIMM23
SPRYD4
LSM5
SLC26A2
ZSCAN30
PICK1
CCDC43
MAP2K2
LOC112694756
SPRED1
ADAM15
KCTD5
HIRIP3
NOL7
EXOSC6
ZNF696
TAF1B
PGS1
SUMF1
ATAD5
BTBD1
C8orf37
UQCRC1
SYTL2
FCRLA
TSSC4
EIF3C
EIF3CL
PURB
GRPEL2
POLR3D
THEM4
SCAP
TPM3
GNB2
QTRT1
JUNB
HIKESHI
CLTC
PPP1R15B
DYM
RCC1
METTL2A
ATAD2B
AATF
C11orf65
ADK
KDM4C
OR2L13
CT45A7
CT45A6
CT45A5
STAU1
SLC25A19
SPATC1L
DDX18
COX7A2
TPK1
RAF1
DDX50
DDX27
MEMO1
SH3TC2
GRB7
RPS13
ZC3H6
CYCS
CGGBP1
C10orf88
MGST3
SLC3A2
PSMD6
HINT3
C3orf38
RPL10A
NFIA
GAL3ST4
RPL22
RFX1
NUP214
SOS1
GPATCH4
THUMPD3
TXNDC15
WASHC5
NSMCE2
H2AX
ZNF846
GGPS1
ARID4B
TPR
ODR4
SNF8
HIF1AN
DNAJC25-GNG10
DNAJC25
TRDMT1
GATAD2A
TAF13
BRF2
ZNF589
YTHDF2
DHPS
RANBP6
SCAF11
FZD1
H2BU1
H2AW
MAP2K3
DCPS
CEP78
LEPROT
LEPR
UPF3A
FBXO27
UBA52
INTS4
APH1A
GET4
GAPVD1
TSFM
UBR4
ERCC5
RPLP0
DYNC2I1
NXF1
NUDT15
RBM12
CPNE1
REXO5
ERI2
DNAH14
TRIP6
ARHGAP5
ILF3
NSUN5
TCF12
CCDC107
KCNMA1
NUDCD1
NR1H3
ACP2
XRRA1
SPCS2
ULK4
ACBD3
IVNS1ABP
CCDC83
SLC19A2
IL17B
MMACHC
CCDC163
SPNS1
RPL5
HNRNPL
ZNF622
ATAD3A
FAF2
COA1
H3C1
H4C1
TOMM34
SF3B2
RNPS1
PIGL
YTHDF1
TRA2B
ANAPC15
TIMM17A
SRCAP
LOC730183
ATF3
BRD2
NCAM2
JOSD2
GPKOW
PSMB6
BRIX1
MRPL27
EME1
CCZ1B
WDR43
LIG4
ABHD13
EEA1
TRIB1
PCOTH
MIPEP
DZIP3
CIP2A
C2CD4D
CPLX2
HEXIM2
TMA16
TMEM259
ACBD6
SRRM1
ACSL3
P3H4
FKBP10
FEM1A
TRAF7
UBE2Q1
SUGP1
MAU2
RNASEH2A
DIMT1
LUC7L2
FMC1-LUC7L2
FMC1
PRRC2C
RFX3
RPL21
CTSC
CNTLN
TMTC3
CEP290
TRAPPC3
PTBP1
PSMD4
CAMLG
SF3B4
VIRMA
PFDN4
FBXW9
MINDY2
WDR35
TERF2
REXO4
LRCH4
FBXO24
CCNT1
MOB4
CLPTM1
CLP1
AHCTF1
TMEM147
HUS1
MTERF1