ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852814 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◣ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NRARP
PTMA
FAM227A
CBY1
KIAA2012
RIIAD1
CELF3
GABPB2
STC1
ALDH1A1
SRP68
MTF2
VWCE
BCL9
NOTCH1
EPYC
NTN5
APOD
LFNG
NAV2
GEMIN4
NDUFB5
MRPL47
CDX2
ARID2
MATR3
MED25
FUZ
PRSS23
PYM1
DGKA
RGS2
EPHX3
ANKHD1-EIF4EBP3
ANKHD1
LINGO4
STK31
MAMDC2
ZSCAN2
SLC20A2
LMO3
LRRTM2
CTNNA1
SMARCA2
PRR15
GGH
FOXP1
GRK6
KRTAP19-2
KRTAP19-1
CDH12
IQCH
AAGAB
DUX4
ANKRD6
TJP2
PIPOX
C1QTNF7
HDAC4
HMGB1
SLC12A7
IFRD1
SH3GL3
CYP1A1
CLEC4F
ZNF750
TMEM17
VAV3
SNAPC3
ABCB10
CEP85L
SLCO5A1
TPRG1
CLEC9A
PLEKHG1
ETV3
LRP12
TLX3
DDX17
C2CD4D
TARS3
LIMK2
PLPP2
HAUS6
EHD4
ETV1
TMCC1
ANKRD44
GCNT1
ID3
HGS
ARL16
TES
ZDHHC3
EXOSC7
KCNA6
PER2
POLI
H3C6
AMN1
ARIH1
HAO2
ADAM28
PGRMC2
SOX14
AP1M1
WFDC13
WFDC10B
KMT2B
HOXA9
LYPLAL1
UNK
H3-3B
PLA1A
MLLT11
CDC42SE1
PHF5A
ACO2
ESYT3
UGT1A5
KRTAP3-1
BAHCC1
FBXL19
OR4N4
CEMIP2
ZNF775
PPFIBP1
GLI2
CCPG1
C15orf65
NUP160
TRIB3
SINHCAF
SH3BP4
CSTB
TRIP11
H4C14
GRAMD4
DPYSL3
NPY4R
NPY4R2
RTBDN
MAST1
CAST
TMEM68
TGS1
NARF
ESRRA
CATSPERZ
NADK
LINGO1
LAMC1
MARCKS
CLRN3
PRDX1
C3orf20
TRPC3
CLUAP1
YEATS2
H4C15
HDAC9
WFDC8
MSANTD4
KIAA0040
ZNF335
TSKU
PRKAB2
KDM2A
HPS4
ARHGAP24
GTF3C3
MAD2L1BP
GTPBP2
CCT2
ZFC3H1
THAP2
LMNA
AUH
MAST4
LOC100506422
RNF217
CHRM3
RFLNA
RORC
IL21
SYNE2
ONECUT2
SLC33A1
RNF20
PTGR1
KRT23
NRCAM
ESRP1
ZSCAN10
SEPTIN9
PLK2
ROCK2
GOLPH3L
TLE1
KDM3A
AKIRIN2
C6orf132
ZNF428
PTCH1
MUS81
CFL1
MAP3K9
RFX5
MTUS1
MFSD4B
SHC3
ID2
ECT2
HNRNPLL
NDUFS5
BORCS6
PPME1
C2CD3
LRATD2
SPRY4
ZNRF3
RAB23
HES3
ICMT
NACAD
TBL1XR1
ZNF195
ITGB4
DISC1
EGFLAM
POLB
HMGN1
ZMAT4
ZNF687
HCRTR2
CEP68
CDC42SE2
SIX2
NRP2
KLF6
HOXB9
CDH18
TPD52L1
LCE3A
FRA10AC1
FIGLA
CAV2
FOXP2
ZBTB6
C1orf100
SRGAP2B
SRGAP2C
ATXN1
SH2B2
RIN2
LRP1B
SLC39A8
LTBP1
NDE1
MARF1
PI4KB
CGN
IL31RA
PLCH1
MEX3D
UBTD2
TRIB1
ZBTB45
LTK
USP39
PDZRN3
AGPS
KCNN2
PDP1
JMJD7-PLA2G4B
JMJD7
CLCF1
COX20
KNTC1
BCL2L11
DUSP12
CYTH2
ADD2
FTH1
PDIK1L
EIF4EBP1
ZFP69B
PGK1
AKAP6
NUCKS1
ZNF608
MACROH2A1
OAZ2
PSMB7
GOLGB1
VCAM1
SYBU
STON1-GTF2A1L
CEMIP
STON1
ABHD11
TPST2
SCNM1
LYSMD1
FIGNL1
TNFAIP2
CRTAP
SLC25A36
TIAL1
DPP3
ST6GAL1
DDAH1
SRI
TAS2R50
SRGAP1
ACTR2
FGF1
ETV4
SDHC
CPT1A
ELF1
UTP25
WBP4
TRAK2
STRADB
CDK5R1
RSF1
AAMDC
POGZ
RPS11
PIF1
TLR4
GADD45G
SHF
F11R
SNX27
HHIPL2
DCSTAMP
MBLAC1
SNRPN
SNURF
ZNF106
SNAP23
TMEM132A
TMEM211
ADH5
CRISPLD1
DST
LIMCH1
CAPRIN1
LMCD1
PIK3R3
TLE3
CUEDC1
FNBP1L
H3C8
H2BC10
FOXJ3
S100A10
RHOJ
CTSV
SPATA12
IGF1
SNTB2
CHN2
CPVL
HSPA1B
PDIA4
PHIP
KANSL1L
SC5D
LAMP1
STX6
DMRT3
ATP13A3
ZNF304
HACL1
BTD
MDM4
ARNT
CDKN2B
MIOS
ZBTB40
SCN1A
MYEOV
SPRED2
TLN2
TM4SF20
ANAPC15
CEP63
ANAPC13
TNRC18
LOC100129484
PCDHB8
PCDHB16
JUP
MANSC1
ZNF736
RAP2B
TRMT2A
RANBP1
ANKK1
OR2H2
CORO7
HMOX1
ACSL6
MRO
SLC30A8
FBXO48
APLF
PADI1
ETV6
PTPRO
SEMA6C
ALDH1B1
AKR1C2
ITPRIP
DLX5
CNIH4
FGF3
KLF7
TCF12
POLR2M
TMPRSS4
NAA40
DNAJB2
LMNTD1
SLC25A11
RNF167
CITED2
SDHD
TMCC3
RAET1L
GSN
GATA3
CDC42EP3
VANGL2
TTI2
AGTPBP1
ICOS
PMEPA1
EMSY
TMEM88B
ANKRD65
OR10S1
NPTX2
CHMP4C
RCC2
POC1A
RPA3
FGF19
TIA1
SHROOM3
ALDH3B1
AGPAT3
SELENBP1
SYT2
HES1
PIMREG
VGF
OR2T1
ST7
MNAT1
CHKB
CACHD1
MCCC1
TWIST2
LNX1
SH3D19
AMELX
PRKX
CCDC187
BBS7
EIF4A2
ARHGAP5
OR5AP2
SERTAD4
FGF18
VASH2
NEFH
OTUD7B
UBOX5
FASTKD5
HSF2
FAM83A
KCNH8
MUC15
MID1
RAI14
ZDHHC5
ZNF292
SEC24B
H3C15
H3C14
H2AC19
H2AC18
RBM20
RPL27
HCN4
HSPB3
BRD4
SCT
CDHR5
ARID5A
ADRM1
MCM7
AP4M1
VDAC2
PTP4A3
TRIM61
ZNF395
ABLIM1
NFIX
RRBP1
KLHL24
LDB1
PRDM10
ETS2
SST
TMEM41B
SPHK1
PIN4
LOC389199
AFAP1
PDE7A
ZNF184
ST8SIA1
GRAMD2A
TDRD1
METRNL
RCN1
FGFR2
SMCO1
GBX2
UPF1
MFSD6
SF3A2
PLEKHJ1
WASF1
CDC40
NDUFS8
KDM5B
DENND4A
PRUNE1
MINDY1
RASAL2
CHD6
TRIM13
TPM1
LMO4
ZNF346
FILIP1L
ANP32E
CXCL13
CD59
IFT80
MIDEAS
CTTNBP2NL
SMC4
EMP1
RNF187
ZNF680
MYPN
SYNCRIP
RABGAP1L
CEP164
OTULINL
PCBP1
TCF4
OGA
AKAP9
IP6K2
FANCI
BHLHE40
C18orf21
LY6G6D
MRPL42
ANXA2
MS4A2
CLK3
PAK6
CPSF4L
TBC1D31
SPRING1
RNFT2
CHST12
OPN3
CHML
ZSCAN9
CSRNP2
CHRNA9
THEMIS
INSM1
G3BP1
GFM2
EYA1
QSOX2
MT1X
KRT8
ZBTB2
LPP
CDIN1
SLC7A11
LYRM1
DCUN1D3
SLC26A8
MAPK14
PTGES2
ARHGAP39
MAP2
INTS9
HMBOX1
HEBP2
PFKFB3
PHF14
OR13C2
VGLL4
FOXO6
CNP
KNL1
DMRTA2
VPS50
HEPACAM2
ZBP1
ZNF718
ZNF595
GPER1
WDR74
SLC3A2
MTHFD1
GABRR2
RTRAF
ZNF268
RNF152
PIP4K2C
NOBOX
IRF4
CBLC
FUCA1
NEBL
SFPQ
C1orf54
APH1A
SLC45A4
C1orf116
AURKB
TBC1D16
TMUB2
SGK3
MT1B
PDS5B
MT1F
SACS
FZR1
ETV5
CNKSR3
TAX1BP3
EMC6
KDM7A
RIC8B
LMO2
CYP17A1
UBE2QL1
SOX6
GAD2
ERMN
TUBA1C
C11orf58
ERV3-1-ZNF117
ERV3-1
ICE1
ST3GAL4
WBP1L
KIAA0895L
CCDC88A
UXS1
CTH
HSD3B1
RHBDL2
RGS7BP
DDX41
BMERB1
RAB30
SYTL2
RADIL
POFUT1
PLAGL2
SAPCD2
ZFAND3
METTL9
RHOBTB2
FLNB
PRSS56
SERP1
EIF2A
TGIF1
PXDC1
SH3PXD2B
GFOD1
ALDH3A1
SPO11
GPSM3
KPRP
EPB41L4B
HBP1
ZNF277
DOCK4
RNF122
WIPI1
CRYGS
CAMK2N1
ECE1
GET3
DDX43
UFD1
CDC45
SEC16B
KRTAP15-1
CRCP
EIF3F
EBAG9
H2AZ2
TPGS1
ZBTB10
TPM4
MAB21L4
MALT1
SENP8
MYO9A
TUBG1
RETREG3
GOLIM4
MSRB3
GPX6
BNIP2
TMEM254
SDCCAG8
CEP170
UBQLN4
LAMTOR2
PELI1
RPS6KA2
TADA1
GAL3ST4
CADPS
OSBPL1A
ZSCAN31
PRCC
ACSS3
EP300
CDC7
SH3PXD2A
MCC
TANC1
CLDN24
CLDN22
ABHD12B
NXPE2
COL1A2
TOMM40
FRY
UBE2G1
RPL23A
RAB34
CDK5RAP2
NLK
FLACC1
CD2BP2
WDFY2
VEZT
FGD6
MNT
PSME2
EMC9
STAP2
MPND
RNF31
OR4C6
LRATD1
TBXT
CCDC200
RARB
IFITM2
MYO1B
IFITM1
PHF3
NUPR1
MOSPD3
GP5
HSPA13
GORASP2
TTF2
OARD1
NFYA
TTC23L
TMEM60
PHTF2
EXPH5
KRT6B
SLC25A25
NKIRAS1
TSPAN13
ZBED5
MEGF9
C2orf73
NR1D2
CLCN4
C7
UBALD2
INTS4
LGALS3BP
ADAMTS19
CENPC
PAFAH2
FAM72C
FAM72D
IGSF10
ZBTB8OS
RBBP4
FBRS
RDH5
BLOC1S1
ASCL4
WDR36
EGFR
ZNF8
PLA2G6
KCNK15
DNAAF1
HOXA3
COX8A
MTMR11
CDC14B
THEM4
ARHGAP42
FOCAD
ADGRL1
CYTH1
SERPINB8
EEF1A1
DEDD
ATL1
GTF2H4
CDR2
IQCA1L
H2BE1
TDP2
ACOT13
BAIAP2
RNF19B
MMP10
EEF1AKNMT
ZNF708
TGM3
MEA1
STK32B
DNAJA1
CLDN16
APTX
MOBP
SNRPC
CIART
PDE4DIP
AKAP10
BACE2
NFYC
ATR
BAZ2A
ASPM
PNRC1
PCNP
RAPGEFL1
RAI1
MAT1A
FRG2C
MIA3
TIMM10
ZNF189
MRPL50
EID1
STK32C
LRRC27
CKAP5
KIAA1217
OR2AE1
NES
MTRNR2L8
METTL11B
SOX2
LRRN1
DNMBP
MUC1
REST
AGO1
OTX2
ARHGEF38
SOCS3
DNMT3B
MUC3A
TMPRSS11E
OR5AR1
ZFHX3
PPBP
PF4
NRG1
FIGNL2
DUSP6
MTHFD1L
RMND5B
SPATA45
RPH3A
NTRK2
GDF11
DPPA5
BCOR
SFRP2
ZNF483
ANKRD1
CD99L2
TCF7L1
SLTM
BTG2
FGD4
USP44
TRIM48
TALDO1
PPP1R16B
SHCBP1L
EDDM3B
FLAD1
FGD3
FAM222B
MTRNR2L1
PHC1
GIMAP5
SAMHD1
GXYLT2
MTRNR2L2
MSH3
DHFR
PDPN
PRICKLE1
OBI1
DHX32
SRRM4
SNX16
HESX1
GOLGA6D
VCAN
SLC7A5
TMEM47
BFSP1
PARP1
PREX2
FZD2
NFE2L3
SAMD5
LIN28B
LZTS1
ZNF398
POSTN
TDGF1
PALM2AKAP2
FBP1
GPRC5B
TRIM24
LRRTM3
CLDN9
RFX4
FBXW11
MTM1
PSMD9
HPD
CAMTA1
PGPEP1
MRPL20
PLAGL1
FAM120B
ZSWIM3
ACOT8
TIMP4
SCGB3A2
SHISA5
DDR1
SORBS2
TRIM2
TNC
NCDN
KIAA0319L
WDR49
GOLGA6A
DCAF4L1
TRAPPC8
RGS3
COL23A1
RASGRF2
GJA1
KCNJ1
PSIP1
ST18