ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277134 | T.T
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◣ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NRARP
NAV2
FAM227A
CBY1
NOTCH1
LFNG
SINHCAF
PYCR2
HMGB1
PLPP2
MED25
FUZ
NDST1
KDM2A
FRG2C
NDUFB5
MRPL47
TGIF1
MTF2
DNM1L
PTMA
NEUROD1
ZSCAN2
MYEOV
TMEM88B
ANKRD65
SNX16
SMCO1
DPP3
ARIH1
CLCF1
KMT2B
FGF19
ESRP1
DUX4
WDFY2
ARID2
FHL2
ITGB4
WDR74
MTDH
FRG2
MCCC1
ISL2
TINAGL1
PHF5A
ACO2
LYPD1
SPINT1
MUC1
TIAF1
MYL12A
LIMK2
FBXL19
VWCE
CNP
SMIM3
TRIM48
DISP3
ARSG
TMEM205
CCDC159
RAB3D
SIX2
JUP
ADAM28
F11R
CHD6
KLF7
ALDH7A1
OLFML3
DDX17
ZNF775
CAPNS2
IQCH
AAGAB
SH3GL3
TCF12
RFLNA
CCT2
GLI2
CEP41
ERGIC2
SRI
CPT1A
TIA1
KCNN2
CYTH2
VASH2
MUS81
CFL1
POLR3E
HIPK1
ETV1
OTUB2
HNRNPDL
ENOPH1
N4BP1
DST
CAPRIN1
SOX5
EP300
NUP160
NDUFS5
ESRRA
CATSPERZ
SLC16A13
CCDC200
OAZ2
PLEKHA3
FKBP7
LRRC25
CUEDC1
CPNE2
UNK
H3-3B
IFRD1
YWHAZ
MS4A2
SHF
MAP3K2
KLK6
GRK6
SPHK1
PELATON
PMEPA1
SOX6
COL23A1
C11orf58
KIF26B
HNRNPC
ZFC3H1
THAP2
POLB
CYP1A1
ZNF268
ZSCAN9
ZFAND3
TTF2
ZNF428
PER2
CDH13
RHOBTB2
AHNAK2
SLC33A1
PIMREG
TIAL1
H2BC4
H2AC6
TMEM41B
SUFU
ACTR1A
EFHC1
CDCP2
ZNF506
ITGB1
ST8SIA1
SUN1
ABCC10
LPIN1
SYNCRIP
VAMP5
BCAS2
EFNA1
RSF1
AAMDC
CDC42EP3
TNRC18
LOC100129484
SLC25A36
ATAT1
ETNK1
DMRTA2
HID1
NPIPB12
TJP2
GPR39
EXOSC2
PDIA4
RBM39
PDP1
ABCC1
SRSF7
ETV5
MUC3A
TENT5C
FXR1
NPIPB5
ZNF195
EXOC5
AP5M1
ASMTL
FBRS
SHISA7
TSPAN14
UBTD2
BMF
C6orf132
ARHGAP5
EPB41L4B
NASP
SLC2A4
HES1
ACOT1
TTC13
ARV1
MEF2C
KNTC1
TNFRSF21
NPIPA3
NPIPA2
ZNF608
ONECUT2
PIN4
SLC7A5
ZDHHC5
JMJD7-PLA2G4B
JMJD7
FGF1
IVNS1ABP
SOX2
ADRM1
PSME2
EMC9
EIF4A2
OR7A10
RTBDN
MAST1
EIF1AX
TMCC1
MNT
CNIH4
PRORP
PPP2R3C
CSRNP2
KIAA0040
TRIB1
PRDM2
NPIPB8
TMEM200C
DHRS3
RALGDS
C15orf40
AKNA
RBFOX2
ZNF627
LOC100509620
DOCK5
MYL12B
HMGN1
ZNF37A
NTN5
PGBD2
CAST
MXD1
WDR36
CHD1L
TBC1D31
LYRM1
DCUN1D3
PRKAB2
UBR2
FOXO6
LNX1
RBBP6
G3BP2
ID3
MAST4
ABCC2
ACSL6
GDF5
CEP250
CASQ2
SLCO5A1
ERV3-1-ZNF117
ERV3-1
CLDN4
RASAL2
LMNA
MARCKS
S100A16
RAPGEFL1
HSPH1
RRBP1
FAM83G
ETFRF1
CFAP94
CSDE1
PLA2G6
ZBTB6
SRSF6
GPSM3
FZR1
H4C14
GREB1
ZBTB37
PDE4DIP
IRAG2
NRCAM
DHX32
TES
ADAR
MBNL1
TAX1BP3
EMC6
SLC41A3
FAM83B
GSN
CEP63
ANAPC13
C2CD5
ETFBKMT
NEBL
PTX3
MOB3C
PDE4D
VDAC2
TOP1
DGLUCY
RABEP2
C16orf74
PIGX
CEP19
C1QTNF7
SPAG4
GPR158
HLTF
MCM7
AP4M1
LSG1
ARNTL2
C15orf62
PLEKHG1
NWD1
ANKRD40
GADD45A
KRT6A
CD55
RAPGEF5
ZSWIM4
WDR33
POU2F1
NCOA4
HNRNPU
MT1B
SNAPC3
MSANTD4
CCDC88A
PHACTR2
TMEM107
MAP3K9
EXD1
CHP1
TEX9
RFX7
TMUB2
HEXIM2
CHD9
MTRNR2L2
MSH3
DHFR
KDM3A
TLX3
PIF1
GGPS1
ARID4B
S100A5
S100A4
S100A3
RIOX1
PSME3IP1
RSPRY1
MTA3
KCNG3
PTPN12
DDX5
CEP95
TSPAN13
GSG1
OGA
SPATA12
GTF2H4
SPRY4
ZNF763
H2AJ
NR1D1
KCNK15
GET3
BAHCC1
NPIPB3
DDR1
ZMAT2
THAP10
LRRC49
MEX3D
CHD8
CREM
DCBLD2
RTN4
PWWP2A
ARF4
PSMB7
KMT5B
DCLRE1B
AP4B1
NPIPB13
MIDEAS
NFE2L2
ZNF669
YLPM1
EXPH5
PTPRH
KMT5A
SPAAR
VPS50
HEPACAM2
TRAPPC6B
PNN
CD248
AMN1
CYP2S1
BORCS6
EEF1AKNMT
HAO2
DENND4A
NIBAN2
SLC25A21
BRMS1L
RNF13
CORO2B
ARID5A
ANKRD12
CDCA4
STAG3
GPC2
CCND1
CA5B
HOPX
RNF103-CHMP3
RMND5A
LOC100505841
TNFAIP8
SLCO1A2
BCL2L11
SF3B5
FAM107B
CLEC2B
WDR54
C2orf81
M6PR
KLRG1
ARPP19
ZFHX3
NDUFS2
ADAMTS4
PARP2
CTXN3
LARS1
PLCXD2
MAMDC2
SACS
SMARCA2
NES
MTRNR2L8
PIPOX
CDX2
METTL11B
LRRN1
DNMBP
REST
HDAC9
AGO1
OTX2
LMCD1
CACHD1
ARHGEF38
SOCS3
WFDC8
DNMT3B
TMPRSS11E
OR5AR1
PPBP
PF4
NRG1
FIGNL2
DUSP6
MTHFD1L
RMND5B
SPATA45
RPH3A
NTRK2
GDF11
DPPA5
BCOR
SFRP2
ZNF483
ANKRD1
CD99L2
TCF7L1
SLTM
SNRPN
MOBP
BTG2
FGD4
USP44
TALDO1
RIIAD1
PPP1R16B
SHCBP1L
ABHD11
EDDM3B
FLAD1
FGD3
HES3
FAM222B
MTRNR2L1
ETV4
ICMT
PHC1
GIMAP5
SAMHD1
GXYLT2
PDPN
RCN1
GADD45G
PRICKLE1
OBI1
ITPRIP
CELF3
SRRM4
HESX1
GAD2
GOLGA6D
FGFR2
VCAN
TMEM47
BFSP1
PARP1
PREX2
FZD2
NFE2L3
SAMD5
LIN28B
SNURF
LZTS1
ZNF398
POSTN
TDGF1
NADK
PALM2AKAP2
FBP1
GPRC5B
TRIM24
LRRTM3
CLDN9
MFSD4B
ECE1
RFX4
FBXW11
MTM1
PSMD9
HPD
CAMTA1
PGPEP1
MRPL20
PLAGL1
FAM120B
ZSWIM3
ACOT8
TIMP4
TBC1D16
SCGB3A2
SYT2
SHISA5
CHN2
SORBS2
TRIM2
TNC
NCDN
KIAA0319L
WDR49
GOLGA6A
DCAF4L1
TRAPPC8
RGS3
LIMCH1
RASGRF2
GJA1
KCNJ1
PSIP1
SOX14
ST18
HGS
ARL16
MAD2L2
DRAXIN
TTYH1
HBG2
FRAT2
C1orf127
POU5F1
GPC4
IER5L
SELPLG
FBXO40
IFT80
ZNF343
SASH1
ZSCAN10
DOK7
OSBPL1A
FZD8
MED12
GOLGA6B
OR2T1
SCAF4
HHIP
BEND3
FOXP1
APOBEC3F
KIFBP
FGF2
CTNND2
RASA1
MYCL
GDF3
TPST2
HMOX1
FAM180A
CELF4
ZNF335
HOXD13
HOXD12
GOLGA6C
PNRC1
NANOG
MDN1
ETS1
PDCL
ACVR1
SLC35A5
ATG3
UTF1
SH3BP4
DICER1
TRIB2
SLC20A2
PEAK1
HMG20A
WNT5B
B3GALT5
BCL9
TOX3
CRYGB
PRR15
LINGO1
CDC14B
PLEKHB1
DAGLB
ZNF436
MYSM1
TUBB
MDC1
IL34
EXT1
REV3L
SLC39A8
UNC13B
PCBP1
TOMM40
PYGB
LEFTY2
KDM2B
C1orf198
GNAI2
DTNA
CCN2
CER1
C8orf58
PGK1
EPHB3
SYN3
DHDDS
SLA2
FOXD1
SGMS2
ADA2
EPB41L1
SRCIN1
TESK2
L1TD1
ZNF304
LYPD6B
PRDM14
NECTIN1
LRAT
MAP6
ECT2
LRTM1
DDX43
MMACHC
ZNF532
ZNF536
ABCB5
GTF2I
CARHSP1
CACNA1S
OCSTAMP
ERMN
AASS
MACROH2A1
TRIML2
VPS37B
WBP1L
VENTX
CAPN3
PGBD5
TIAM1
KLF3
CSF2RB
DLL1
PCYT1B
CHFR
HES5
ZNF296
PANK4
GEMIN7
CXADR
NPSR1
ANKRD6
PUF60
AEBP2
SMIM14
SNX19
BCAT1
CCDC169-SOHLH2
CCDC169
JPT1
RGPD1
DACT3
FAM181A
SLC10A2
SRP68
AUH
SALL3
MAGEB2
PAFAH2
LIN28A
SMAD3
ANK2
FXYD5
MRS2
KRT6B
RAX
SLC46A1
LIPK
CRISPLD1
LRRTM4
PPP2R3A
LHFPL4
LRIG1
ZNF781
IL7R
NXPH2
NDUFV1
TRDMT1
USP7
CACNA2D1
TMC5
CTBP2
ALDH1A2
STOX2
STK31
ITGB3
ZNF565
DPYSL3
FZD9
INO80D
MMP10
RGPD2
PACSIN2
DIDO1
SENP2
TIAM2
GABRQ
PDE1B
INSM1
SALL4
EMSY
GABBR1
FAM20A
CCDC33
ACOXL
KLF6
TP53INP1
MOG
C20orf96
VOPP1
SIK1B
SIK1
RMND1
ARMT1
CDYL
GBX2
TNRC6A
TRPC4AP
OSBPL2
ATP6V1G1
CELSR3
ETFB
ESX1
TAGLN3
NDUFAB1
H3C15
H3C14
H2AC19
H2AC18
UFD1
SMPDL3B
CDC45
IL21
TMPRSS9
AASDH
NKX2-2
DPH6
GCNT2
TMEM43
CHCHD4
DND1
KRT8
SORT1
G3BP1
ZBTB45
SPATA22
LONRF3
DPPA4
GABPB2
SLC2A14
ZNF814
SYAP1
FAM24B
GLDC
GCSAM
SLC3A2
PCDHB8
PCDHB16
LEKR1
SLFN12
DET1
PXMP4
PRSS23
PIK3C2A
PXDC1
PTAR1
LRRTM2
CTNNA1
TET3
ISOC2
LLGL1
TRMT2A
RANBP1
RNF19A
ZFYVE1
ACSL1
TP53
AK4
SHC3
RNASE9
GABRB3
CDH10
ACCS
EPB41L2
SLAMF1
SPATC1L
SEC14L5
CCDC130
PCDH1
CHD7
PRRC2B
CCDC88C
FRS2
PDE4B
EPHA4
MID1
ABL2
TSPAN5
TMPRSS7
TLL2
PREP
WDHD1
SOCS4
PPP1R18
NRM
ITPK1
ARMC12
RNF43
PCDH18
PITPNM2
VEPH1
LRGUK
DUSP12
C10orf95
ZNF875
CCL2
UPF1
ZBTB2
CCL26
WDR44
IGBP1
C22orf39
SPIRE1
PRKAG2
NUAK1
ETV6
TTYH2
SAXO1
RRAGA
KCNIP4
YIPF4
ARSL
KRTAP3-1
RBM20
RAB23
TRPM1
IFIT3
EXOSC9
TGIF2-RAB5IF
TGIF2
APOBEC3D
APOBEC3C
FAM200B
JAG1
VEZT
FGD6
PHC2
NRXN1
SUCO
RHBDD2
TMEM114
CNGA1
PRND
ELOVL6
PLCH1
ITGB5
ZNF552
NATD1
RIF1
VANGL2
FGFRL1
CDC42EP4
SPAG9
PRKCA
NACAD
STX16
PIK3R3
LRRC47
GFRA1
ANAPC15
TNFSF8
DEFB114
DEFB113
LEFTY1
SAPCD2
NEK3
LOC150051
SYBU
ADGRL2
TRIP4
SLC25A11
RNF167
PAN2
IL23A
CNN3
PAK1
DLST
TLE3
FZD5
DENR
CD2BP2
MEIS2
PRR5L
NEDD9
IFI16
ANP32A
AHNAK
GSPT2
ZFP3
CYB5R2
BAIAP2
LCOR
TUT1
MVB12A
RARB
RAB30
COPZ1
SDCCAG8
CEP170
OR6C3
IGFBPL1
RIMBP2