ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX330107 | ReN-VM
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◣ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

PMF1-BGLAP
PMF1
COL23A1
MAMDC2
WDR74
FAH
CYP4F11
MUC3A
NGB
FRG2
OPRL1
LKAAEAR1
SNX16
SCML1
LOC105370980
MTF2
EPN1
SACS
ATXN2L
FAM240C
OSBPL2
ESPNL
TMEM216
C1orf198
FRG2C
OR2T1
GADD45G
TTYH1
SKIDA1
LFNG
GPSM3
CAMTA1
ANKRD18A
LRP2
UCKL1
HMGB1
TRIM48
CSRNP2
MUC1
CRLF2
STK32C
LRRC27
NRARP
APBB2
CORO2B
ONECUT2
SPIN1
PLEKHB1
HDAC9
CAPRIN1
HES5
PANK4
HMGN1
HNRNPDL
ENOPH1
BZW2
ANKMY2
CCNG2
FABP7
PPP1R15B
ARID2
ACSL6
KRTAP4-12
FAM120B
DLL1
SLC6A9
LGR6
ARIH1
NES
PDE4B
KLF7
CITED2
ITPK1
LOC100996750
KRTAP4-7
CRYAA
CRYAA2
ZNF717
RGR
LRIT1
CHRNA9
ZNF775
NEU4
ACSL1
MEX3D
KRTAP4-8
KRTAP4-11
BMF
UNC45B
KRTAP9-7
DNMBP
RTN4
LRTM1
OAZ2
RUBCNL
FAM181A
SLC7A5
TUBA1C
ZNF277
DOCK4
SPDYE14
SPDYE10P
ALDH7A1
CDC34
IQCH
AAGAB
MTDH
TSPAN13
KDELR1
GRIN2D
DDX17
ITPRIP
ANKRD6
PCBP4
BCL9L
AGO1
GADD45A
NDRG2
ANKRD18B
TPPP2
VANGL2
KRTAP4-4
CTAGE15
ATAT1
APC2
KRTAP2-4
PYCR2
HBP1
SIPA1L1
PTPRK
IFIT1B
ARHGAP11A-SCG5
ARHGAP11A
PLXNA2
OR8U8
OR8U1
ENO1
KLHDC8A
MUC2
UBTD2
STX6
POTEH
PHF24
CTAGE8
CTAGE4
CXXC5
FGFRL1
STAU2
KMT2B
MARCKS
PAQR6
DUX4
FOXJ1
MAN2B2
LPP
CDK5R1
FMNL3
CCDC200
SHF
LINGO1
TRAF3IP2
CLEC19A
KRTAP4-5
PCDHB5
ADGRB2
NDUFB5
MRPL47
KDM2A
LRIG1
HES6
RHOJ
NREP
ADRM1
TMPRSS5
KRTAP1-1
ARHGEF2
RALGDS
LRRN1
RGS3
SPHKAP
KIF21A
KCNQ3
ESRRA
CATSPERZ
FANK1
TP53INP1
ATN1
PITPNM3
RIPOR3
TRAPPC3
MAP7D1
GALR1
CRB2
PTGS1
TRIB1
INMT
GP6
LMCD1
C1orf127
TRDMT1
FZD9
VOPP1
ZNF358
NFIB
CCDC88A
ADNP
PHYHIPL
LMO3
NCOA4
TRMT1
NACC1
C16orf46
TEAD2
DKKL1
EHF
KRTAP2-3
UGT1A7
ENTPD2
KRTAP4-6
RAB6B
KRTAP2-2
KRTAP2-1
VPS4A
GFAP
AQP5
PTMA
GABRR2
KLF12
PLEKHG2
CCSER1
MED25
FUZ
SLC29A1
MYMX
ZBTB25
ZBTB1
CNDP2
PIPOX
DDR1
CDK5RAP2
OR2A7
TNRC18
LOC100129484
COX20
TBC1D3L
TBC1D3K
TBC1D3J
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
FAM227A
CBY1
NUDT19
KRTAP4-9
CTAGE6
HES3
PLCG1
FGFR2
LIMCH1
TES
NTN5
PREP
HSPH1
ITGB8
KANK1
CASTOR2
SRSF6
LZTS1
STAG3
GPC2
OSGIN1
FGD3
TTYH2
AMMECR1L
RNF44
BCAR1
PFKFB3
CLEC18B
GPAT4
MLPH
TCTEX1D4
PLK3
TMCC2
KRTAP21-2
TRMT2A
RANBP1
TAS2R41
CTDP1
PTTG1IP
TMEM132A
CLEC18A
PLCB4
FAM76A
CTAGE9
ZNF677
VN1R2
MIDN
PAX6
CNN3
ZNF763
RRBP1
UQCRC1
FRAT1
IL2RB
OR4F17
KRTAP9-6
SNAPC3
ABAT
TCF7L2
DDX5
CEP95
MEGF9
UBE2E3
IRAG1
CD24
SLC44A5
OTOP1
AGRN
OR56A1
VSTM2L
DNAH1
ATXN7L2
SPAAR
TEPP
SLC43A2
UNC13D
KRTAP9-8
SHTN1
FBXL19
SLC3A2
DYRK1B
NIN
POLR3E
CRIP2
ZSCAN2
FAM102A
PLXNB1
SLC39A13
SOX6
ACVR1
SRSF7
FOXD1
POLB
ZSCAN9
IFI16
KAT6A
PYDC5
ST7
KRTAP1-3
TNFRSF11B
COLEC10
IFI27
CDK2AP1
ADO
CREBZF
PCDHA6
PCDHA5
KRTAP1-4
ARNT2
CHD6
USP22
MYOG
LOC647264
BCL2L10
TMEFF1
NELFCD
OR4F4
PIMREG
FSCN1
ACSS1
TUBB2B
PCDHB11
POTEM
NOTCH1
SLIT1
TMPRSS7
SENP8
MYO9A
PTPRD
NSUN6
ARL5B
OTUD7B
SFXN5
TUBB
MDC1
RSF1
AAMDC
TNFRSF6B
TEX2
SRGAP2B
SRGAP2C
EEF2K
TCF7L1
NFE2L1
HRAS
ZCCHC24
POLDIP3
SYNCRIP
CELSR3
KMT5B
ID2
CDH18
LMO4
FILIP1L
PDE4DIP
SCD
TMPRSS9
RBM38
LRRC24
C8orf82
DST
NAV2
SMARCA2
MTRNR2L8
CDX2
METTL11B
SOX2
REST
OTX2
CACHD1
ARHGEF38
ID3
SOCS3
WFDC8
DNMT3B
IFRD1
FGF1
TMPRSS11E
OR5AR1
ZFHX3
PPBP
PF4
GRK6
NRG1
FIGNL2
DUSP6
MTHFD1L
RMND5B
SPATA45
RPH3A
NTRK2
GDF11
DPPA5
BCOR
SFRP2
ZNF483
ANKRD1
CD99L2
SLTM
SNRPN
MOBP
ETV1
BTG2
NRCAM
FGD4
USP44
ADAM28
GSN
ZNF608
TALDO1
RIIAD1
PPP1R16B
SHCBP1L
ABHD11
EDDM3B
FLAD1
PLPP2
FAM222B
MTRNR2L1
ETV4
ICMT
PHC1
GIMAP5
SAMHD1
GXYLT2
MTRNR2L2
MSH3
DHFR
PDPN
RCN1
PRICKLE1
CYP1A1
OBI1
TMCC1
DHX32
CELF3
SRRM4
HESX1
GAD2
GOLGA6D
VCAN
TMEM47
BFSP1
PARP1
PREX2
FZD2
NFE2L3
SAMD5
LIN28B
SNURF
ZNF398
POSTN
SMCO1
TDGF1
NADK
PALM2AKAP2
FBP1
GPRC5B
TRIM24
LRRTM3
CLDN9
MFSD4B
ECE1
RFX4
FBXW11
FZR1
AMN1
MTM1
PER2
PSMD9
HPD
PGPEP1
PHF5A
ACO2
MRPL20
PLAGL1
ZSWIM3
ACOT8
TIMP4
TBC1D16
CCT2
SCGB3A2
SYT2
SHISA5
CHN2
PMEPA1
ESRP1
SORBS2
TRIM2
TNC
NCDN
KIAA0319L
WDR49
ZFC3H1
THAP2
GOLGA6A
DCAF4L1
TRAPPC8
RASGRF2
GJA1
TMEM41B
KCNJ1
PSIP1
SOX14
ST18
HGS
ARL16
SPRY4
MAD2L2
DRAXIN
HBG2
FRAT2
POU5F1
GPC4
IER5L
SOX5
SELPLG
MCCC1
PLEKHG1
FBXO40
IFT80
ZNF343
SASH1
GET3
CDC42EP3
ZSCAN10
DOK7
OSBPL1A
FZD8
MED12
GOLGA6B
NDUFS5
CYP2S1
SCAF4
NDST1
HHIP
VWCE
BEND3
RASAL2
FOXP1
DGLUCY
APOBEC3F
KIFBP
CYTH2
FGF2
CTNND2
KCNN2
RASA1
MYCL
GDF3
TPST2
HMOX1
FAM180A
RBFOX2
CELF4
ZNF335
HOXD13
HOXD12
GOLGA6C
PNRC1
NANOG
MDN1
ETS1
PDCL
CEP41
SLC35A5
ATG3
UTF1
SH3BP4
DICER1
TRIB2
SLC20A2
PEAK1
HMG20A
WNT5B
B3GALT5
BCL9
TOX3
CRYGB
OLFML3
PRR15
CDC14B
SPHK1
DAGLB
HES1
ZNF436
MYSM1
IL34
EXT1
REV3L
SLC39A8
UNC13B
PCBP1
TOMM40
PYGB
LEFTY2
KDM2B
GNAI2
DTNA
ADAR
CCN2
CER1
C8orf58
PGK1
EPHB3
SYN3
DHDDS
SLA2
SGMS2
ADA2
EPB41L1
SRCIN1
TESK2
L1TD1
ZNF304
LYPD6B
PRDM14
NECTIN1
LRAT
MAP6
ECT2
DDX43
MMACHC
KDM3A
ZNF532
ZNF536
ABCB5
GTF2I
CARHSP1
CACNA1S
OCSTAMP
ERMN
LMNA
AASS
MACROH2A1
SLC33A1
TRIML2
VPS37B
WBP1L
VENTX
CAPN3
PGBD5
TIAM1
UNK
H3-3B
KLF3
CSF2RB
PCYT1B
CHFR
ZNF296
GEMIN7
TJP2
CXADR
NPSR1
PUF60
AEBP2
SMIM14
SNX19
BCAT1
CCDC169-SOHLH2
CCDC169
JPT1
RGPD1
DACT3
WDFY2
SLC10A2
NWD1
ZNF195
SRP68
AUH
SALL3
MAGEB2
PAFAH2
LIN28A
SMAD3
ANK2
FXYD5
GLI2
MRS2
KRT6B
RAX
SLC46A1
LIPK
CRISPLD1
LRRTM4
PPP2R3A
LHFPL4
ZNF781
IL7R
NXPH2
NDUFV1
PIN4
USP7
CACNA2D1
TMC5
CTBP2
ALDH1A2
MAST4
STOX2
STK31
ITGB3
ZNF565
DPYSL3
INO80D
MMP10
RGPD2
PACSIN2
DIDO1
SENP2
TIAM2
TSPAN14
GABRQ
DHRS3
PDE1B
SLCO5A1
NEBL
BORCS6
INSM1
SALL4
EMSY
GABBR1
FAM20A
CCDC33
ACOXL
KLF6
MSANTD4
TGIF1
ABCC2
MOG
C20orf96
SIK1B
SIK1
RMND1
ARMT1
CDYL
GBX2
TNRC6A
TRPC4AP
ATP6V1G1
ETFB
ESX1
TAGLN3
ANKRD40
NDUFAB1
H3C15
H3C14
H2AC19
H2AC18
UFD1
SMPDL3B
CDC45
IL21
AASDH
NKX2-2
DPH6
GCNT2
TMEM43
CHCHD4
DND1
KRT8
SORT1
G3BP1
ZBTB45
SPATA22
LONRF3
DPPA4
GABPB2
SLC2A14
ZNF814
SYAP1
FAM24B
GLDC
GCSAM
PCDHB8
PCDHB16
LEKR1
SLFN12
DET1
PXMP4
PRSS23
PIK3C2A
TMUB2
PXDC1
SIX2
PTAR1
LRRTM2
CTNNA1
TET3
ISOC2
LLGL1
RNF19A
FOXO6
ZFYVE1
TP53
AK4
SHC3
RNASE9
GABRB3
ARID5A
ZNF428
CDH10
ACCS
EPB41L2
SLAMF1
SPATC1L
SEC14L5
CCDC130
PCDH1
CHD7
PRRC2B
CCDC88C
FRS2
EPHA4
MID1
ABL2
TSPAN5
TLL2
BAHCC1
WDHD1
SOCS4
PPP1R18
NRM
ARMC12
RNF43
PCDH18
PITPNM2
VEPH1
LRGUK
DUSP12
C10orf95
SLC16A13
ZNF875
CCL2
UPF1
ZBTB2
CCL26
WDR44
IGBP1
C22orf39
SPIRE1
PRKAG2
NUAK1
ETV6
SAXO1
RRAGA
KCNIP4
YIPF4
ARSL
KRTAP3-1
RBM20
RAB23
TRPM1
IFIT3
PSME3IP1
EXOSC9
TGIF2-RAB5IF
TGIF2
PDIA4
APOBEC3D
APOBEC3C
VASH2
FAM200B
JAG1
VEZT
SLC25A36
FGD6
PHC2
NRXN1
SUCO
RHBDD2
TMEM114
CNGA1
PRND
ELOVL6
PLCH1
ITGB5
ZNF552
NATD1
RIF1
MUS81
CFL1
CDC42EP4
SPAG9
PRKCA
NACAD
STX16
PIK3R3
LRRC47
GFRA1
ANAPC15
TNFSF8
DEFB114
DEFB113
LEFTY1
MNT
SAPCD2
NEK3
LOC150051
SYBU
ADGRL2
TRIP4
SLC25A11
RNF167
PAN2
IL23A
NUP160
PAK1
DLST
TLE3
RTBDN
MAST1
RAPGEF5
FZD5
DENR
CD2BP2
MEIS2
PRR5L
NEDD9
ANP32A
PDE4D
AHNAK
GSPT2
ZFP3
CYB5R2
BAIAP2
LCOR
TUT1
MVB12A
RARB
SH3GL3
RAB30
COPZ1
SDCCAG8
CEP170
MIDEAS
OR6C3
IGFBPL1
RIMBP2
NEPRO
TCF4
STRA6
COL17A1
HDAC4
F11R
OGA