ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX011616 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◣ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

TRIM24
SLTM
TDGF1
PPBP
PF4
FRAT2
LARP1
ARID2
PALM2AKAP2
HHIP
REST
SOX2
EXOSC9
ANKRD1
NECTIN1
MRS2
SHCBP1L
SRPK1
SNX19
PGBD5
SLC24A3
NRG1
SMARCA2
PHF3
OTX2
CCN2
SLBP
PSIP1
MTRNR2L1
CNOT6
RPH3A
COTL1
ACSL6
NANOG
SMIM14
DPPA5
HOXD13
HOXD12
SOX6
GDF11
C11orf58
ANKRD36
LRRN1
CCDC60
CACNA2D1
TNFRSF11A
TMPRSS11E
TALDO1
SOX5
NRXN3
PRRC2B
MEN1
SIX3
RAPGEF4
MTRNR2L8
GLIPR2
MIB1
SYN3
GABRB3
AFTPH
MAD2L2
DRAXIN
TMSB4Y
MTRNR2L10
PLAGL1
TULP2
NUCB1
LRRTM4
CPNE4
TMX1
TMEM107
CACHD1
RGPD1
RGPD2
TTLL6
SPDYE7P
MTRNR2L2
MSH3
DHFR
ARHGEF38
MOBP
SLC2A14
RAD54B
FSBP
FZD8
RASA1
TWIST1
C4orf50
RAG2
IFTAP
CDC42
DEFB114
DEFB113
SGMS2
MEGF10
MTHFD1L
ZFYVE1
NXPH2
ZNF781
ETV3
PXDC1
MYO1E
FGR
PLA2G4A
SDS
OR11H2
CELA2A
RCN1
PARP1
MDN1
HIPK3
SLC22A16
PDHA2
CCNT1
SFXN1
CYP27A1
KCNH1
FMO2
PITX2
CER1
RASGEF1B
BMPR1B
OBI1
SGMS1
ADD2
BCAT1
SLC2A12
ZIC4
MCC
BNIP3
HCK
KLK10
ZNF608
L1TD1
MAN1B1
FBXW11
BIN2
CTSF
TMCC1
POSTN
TLE3
KLF5
TAX1BP1
WLS
SALL3
TRPM3
LITAF
NSUN7
MVB12A
LRFN3
UBD
N4BP1
NCOR2
MTRNR2L6
SH3KBP1
CASQ2
SLC25A23
CRB3
ITM2B
FLAD1
THRB
NR2F2
RGPD6
ACCS
PHC1
FAM24B
ILF2
RGS2
FAM178B
SNRNP25
POLR3K
OAZ2
NKX1-2
CDH12
H2BC21
H2AC21
H2AC20
CDS1
UQCRHL
BCAT2
HES3
ICMT
INAFM2
MED12
GSN
GCNT2
GUCA1A
ETS1
ATAD2
ZNF620
VCAN
ZFAND6
NTRK2
HMOX1
PPP2R3A
ANGPT1
GALM
NPAS1
PIK3R4
IBTK
SLC13A3
JPT1
TMC5
LRGUK
CRADD
PHF8
TRANK1
MRPL20
SORT1
FOXN3
ZNF281
PCDHA10
PLAAT4
FGFR2
FBXL19
GABRQ
FRMD3
SLC6A11
QTRT1
POLQ
AMBRA1
CYP2S1
NEUROG3
ENOX1
ZBTB39
FGF1
CTBS
CLDN23
OR2H2
ARSA
TSGA10
C2orf15
KDM7A
GPR85
ECI2
RIF1
CIITA
RMND5B
DNAJC7
FRZB
SCGB3A2
RNF43
ERBB2
PGAP3
SERINC5
GPRC5B
UPF1
IFNA1
AK4
HOXD1
ANKRD36C
CASP7
NGF
GIMAP5
C1orf198
RBAK-RBAKDN
RBAK
P2RY14
RASGRF2
PRR5L
COMMD9
LRAT
TOX3
PRTFDC1
MFSD4B
FOXP1
CELF4
DDX17
RNASE9
LIMS1
LMCD1
GRHL2
MAPKAPK2
CHRNA9
PRICKLE1
TNRC6A
RDH12
CFTR
ZNF532
GCSAM
SIRT4
CNMD
SORBS2
LHX8
PTPRN
SLC2A10
TSKS
AP2A1
OR5AR1
ZSWIM3
ACOT8
BEND3
SPIRE1
SMPDL3B
MUSK
IDO2
WDR74
DSC2
NDUFAB1
NRARP
MAMDC2
MTF2
NAV2
SACS
NES
PIPOX
CDX2
FAM227A
CBY1
METTL11B
DUX4
LFNG
HMGB1
DNMBP
ZSCAN2
MUC1
NDUFB5
MRPL47
HDAC9
AGO1
ID3
PTMA
SOCS3
WFDC8
DNMT3B
IFRD1
MUC3A
ZFHX3
GRK6
FIGNL2
DUSP6
MED25
FUZ
SPATA45
BCOR
NOTCH1
SFRP2
ZNF483
CD99L2
TCF7L1
SNRPN
ETV1
BTG2
NRCAM
FGD4
USP44
ADAM28
TRIM48
RIIAD1
PPP1R16B
ABHD11
EDDM3B
FGD3
ZNF775
PLPP2
FAM222B
ETV4
SAMHD1
GXYLT2
PDPN
GADD45G
CYP1A1
ITPRIP
DHX32
CELF3
SRRM4
SNX16
HESX1
GAD2
GOLGA6D
GPSM3
SLC7A5
TMEM47
BFSP1
PREX2
FZD2
NFE2L3
SAMD5
LIN28B
SNURF
LZTS1
ZNF398
SMCO1
NADK
FBP1
LRRTM3
CLDN9
ECE1
RFX4
FZR1
AMN1
MTM1
PER2
PSMD9
HPD
CAMTA1
PGPEP1
PHF5A
ACO2
FAM120B
TIMP4
KMT2B
TBC1D16
CCT2
SYT2
SHISA5
CHN2
PMEPA1
DDR1
ESRP1
TRIM2
TNC
NCDN
KIAA0319L
WDR49
ZFC3H1
THAP2
GOLGA6A
DCAF4L1
TRAPPC8
RGS3
COL23A1
LIMCH1
GJA1
KDM2A
TMEM41B
KCNJ1
SOX14
ST18
HGS
ARL16
SPRY4
TTYH1
HBG2
C1orf127
POU5F1
GPC4
IER5L
SELPLG
MCCC1
PLEKHG1
FBXO40
IFT80
ZNF343
SASH1
GET3
CDC42EP3
ZSCAN10
DOK7
OSBPL1A
GOLGA6B
IQCH
AAGAB
OR2T1
NDUFS5
SCAF4
NDST1
VWCE
RASAL2
DGLUCY
APOBEC3F
KIFBP
CYTH2
FGF2
CTNND2
SHF
TES
KCNN2
MYCL
ONECUT2
GDF3
TPST2
FAM180A
RBFOX2
ARIH1
ZNF335
GOLGA6C
PNRC1
PDCL
CEP41
TNRC18
ACVR1
SLC35A5
ATG3
UTF1
SH3BP4
CCDC200
DICER1
TRIB2
SLC20A2
PEAK1
HMG20A
ALDH7A1
WNT5B
B3GALT5
BCL9
CRYGB
RTN4
LOC100129484
OLFML3
PRR15
LINGO1
CDC14B
PLEKHB1
SPHK1
DAGLB
HES1
ZNF436
MYSM1
TUBB
MDC1
CAPRIN1
SRSF7
SNAPC3
IL34
EXT1
REV3L
SLC39A8
UNC13B
PCBP1
TOMM40
PYGB
LEFTY2
KDM2B
GNAI2
DTNA
ADAR
C8orf58
PGK1
EPHB3
DHDDS
SLA2
FOXD1
ADA2
EPB41L1
SRCIN1
TESK2
ZNF304
LYPD6B
PRDM14
MAP6
ECT2
LRTM1
DDX43
MMACHC
KDM3A
ZNF536
ABCB5
GTF2I
CARHSP1
CACNA1S
OCSTAMP
ERMN
LMNA
AASS
MACROH2A1
SLC33A1
TRIML2
VPS37B
WBP1L
VENTX
CAPN3
TIAM1
UNK
H3-3B
KLF3
CSF2RB
DLL1
PCYT1B
CHFR
HES5
ZNF296
PANK4
GEMIN7
TJP2
FRG2C
CXADR
NPSR1
ANKRD6
PUF60
AEBP2
CCDC169-SOHLH2
CCDC169
DACT3
FAM181A
WDFY2
SLC10A2
NWD1
ZNF195
SRP68
AUH
MAGEB2
PAFAH2
LIN28A
SMAD3
ANK2
FXYD5
GLI2
CHD6
KRT6B
RAX
SLC46A1
LIPK
CRISPLD1
LHFPL4
DST
LRIG1
IL7R
NDUFV1
TRDMT1
PIN4
USP7
CTBP2
ALDH1A2
MAST4
NTN5
STOX2
STK31
ITGB3
ZNF565
DPYSL3
FZD9
INO80D
MARCKS
MMP10
PACSIN2
DIDO1
SENP2
TIAM2
TSPAN14
DHRS3
PDE1B
SLCO5A1
NEBL
BORCS6
INSM1
SALL4
EMSY
GABBR1
FAM20A
CCDC33
ACOXL
KLF6
TP53INP1
MSANTD4
TGIF1
ABCC2
MOG
C20orf96
VOPP1
SIK1B
SIK1
RMND1
ARMT1
CDYL
GBX2
TRPC4AP
OSBPL2
ATP6V1G1
CELSR3
ETFB
ESX1
TAGLN3
ANKRD40
H3C15
H3C14
H2AC19
H2AC18
UFD1
CDC45
IL21
TMPRSS9
AASDH
NKX2-2
DPH6
TMEM43
CHCHD4
DND1
KRT8
G3BP1
ZBTB45
SPATA22
POLB
LONRF3
DPPA4
GABPB2
ZNF814
SYAP1
ESRRA
CATSPERZ
GLDC
SLC3A2
PCDHB8
PCDHB16
LEKR1
SLFN12
KLF7
DET1
PXMP4
PRSS23
PIK3C2A
TMUB2
SIX2
PTAR1
LRRTM2
CTNNA1
TET3
ISOC2
LLGL1
TRMT2A
RANBP1
RNF19A
FRG2
FOXO6
ACSL1
TP53
SHC3
ARID5A
ZNF428
CDH10
EPB41L2
SLAMF1
SPATC1L
SEC14L5
CCDC130
PCDH1
CHD7
CCDC88C
FRS2
PDE4B
EPHA4
MID1
ABL2
TSPAN5
TMPRSS7
TLL2
BAHCC1
PREP
WDHD1
SOCS4
PPP1R18
NRM
ITPK1
ARMC12
PCDH18
PITPNM2
VEPH1
DUSP12
C10orf95
SLC16A13
ZNF875
CCL2
ZBTB2
CCL26
WDR44
IGBP1
C22orf39
PRKAG2
NUAK1
ETV6
TTYH2
HMGN1
SAXO1
RRAGA
KCNIP4
ZSCAN9
YIPF4
ARSL
KRTAP3-1
RBM20
RAB23
TRPM1
IFIT3
PSME3IP1
TGIF2-RAB5IF
TGIF2
PDIA4
APOBEC3D
APOBEC3C
VASH2
FAM200B
JAG1
VEZT
SLC25A36
FGD6
PHC2
NRXN1
SUCO
SYNCRIP
RHBDD2
TMEM114
CNGA1
PRND
ELOVL6
PLCH1
ITGB5
HSPH1
ZNF552
NATD1
MUS81
CFL1
VANGL2
FGFRL1
CDC42EP4
SPAG9
PRKCA
NACAD
STX16
PIK3R3
GADD45A
LRRC47
GFRA1
ANAPC15
TNFSF8
LEFTY1
MNT
SAPCD2
NEK3
LOC150051
SYBU
ADGRL2
TRIP4
SLC25A11
RNF167
PAN2
IL23A
NUP160
CNN3
PAK1
DLST
RTBDN
MAST1
RAPGEF5
FZD5
DENR
CD2BP2
MEIS2
NEDD9
IFI16
ANP32A
PDE4D
AHNAK
GSPT2
ZFP3
CYB5R2
BAIAP2
LCOR
TUT1
RARB
SH3GL3
RAB30
COPZ1
SDCCAG8
CEP170
MIDEAS
OR6C3
IGFBPL1
RIMBP2
NEPRO
TCF4
STRA6
COL17A1
HDAC4
F11R
OGA
GSAP
RAB36
FZD7
TFE3
CRB2
TRIT1
BBC3
PYCR2
TLE1
CDC25A
DTX2
ZMAT2
DNAJB1
TCF12
HLTF
RPL27
YAF2
WDR36
TIAL1
NIPAL1
RNF186
PES1
ZNF254
AHCYL2
SPATA12
MEF2C
HOXB1
DPP3
ZBTB40
UBAP2
TFDP2
CUBN
AKIRIN2
ZNF358
DHX8
PKNOX2
MEX3D
PTGS1
EGR3
TLX3
HELLS
GPR179
CTTNBP2NL
AKAP9
MOSPD3
PDGFA
ZCCHC3
C1QTNF7
RAB17
MTUS1
KIAA1522
LNX1
PTTG1IP
RESF1
PWWP2A
DISP3
NFE2L1
CPA5
ERGIC2
HSBP1L1
FZD3
CFAP20
YLPM1
FGF6
CSRNP2
ANKHD1-EIF4EBP3
ANKHD1
CLCF1
RPL23A
RAB34
IPO11
SLC23A2
MTHFD1
CCDC167
SCOC
TNP2
PRM3
NUDT2
SINHCAF
RNF213
FGF19
PRUNE2
ABAT
IGFBP2
JPT2
ZNF202
ARSG
KLHL5
TCAF1
S100A16
TMEM132B
ADGRA1
TBC1D23
VIM
SKIDA1
CAPZB
SPIC
KIF21A
TCN2
SDHC
MAP2
GAST
CCDC81
TFAP2A
TIA1
MBNL3
RAI14
SMARCAD1
LYPD1
ARHGAP24
KNTC1
RIPOR3
PIF1
PEA15
RGS12
ID1
PYGM
PLEKHA5
LIMK2
ETV5
NCOA7
BAAT
CEP63
ANAPC13
MAP2K5
TCTEX1D4
SENP8
MYO9A
STK32C
LRRC27
ZMAT4
LRP12
SEPTIN9
HECW1
ARF4