ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX266861 | hESC HUES64
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◣ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

SOX2
REST
SMARCA2
TMPRSS11E
TCF7L1
CDX2
NFE2L3
DHDDS
NTRK2
OTX2
ARHGEF38
VCAN
SALL3
SFRP2
SLTM
MOBP
NAV2
MFSD4B
SOX6
PRICKLE1
METTL11B
CLDN9
DNMBP
SACS
DUSP6
PIPOX
NXPH2
OBI1
SAMHD1
CACHD1
DPPA5
FAM222B
DEFB114
DEFB113
MUC1
TBC1D16
NRG1
GPRC5B
OR5AR1
SNX16
SOCS3
HES3
ICMT
HESX1
AGO1
CDC42EP3
HMGB1
SERPINB3
GIMAP5
CHFR
MED12
LIPK
EDDM3B
ANKRD1
MAMDC2
NES
PRDM14
SGMS2
BCOR
TALDO1
MTF2
SLC39A8
PPBP
PF4
RPH3A
TRAPPC8
HDAC9
SHCBP1L
PSIP1
MAD2L2
DRAXIN
FGF1
FLAD1
PALM2AKAP2
PPP1R16B
ADAM28
ZFHX3
GDF11
SLC7A5
ZNF483
FOXD1
CACNA2D1
FZD2
ACSL1
LRRN1
SRRM4
CD200
MTHFD1L
GSN
PHC1
MRPL20
BRINP2
PHF5A
ACO2
ZNF532
SAMD5
LRRTM4
NRCAM
SOX14
IER5L
FBXL19
ARMH4
SHISA5
AEBP2
GALNT3
FAT1
WLS
FAM227A
CBY1
RMND5B
ZNF343
CER1
ZNF304
KIFBP
WDR49
POU5F1
BTBD3
HBG2
TIMP4
RFX4
MDN1
FAM180A
REV3L
PLAGL1
TFAP2A
SPATA45
RCN1
FGF2
ERBB2
PGAP3
HHIP
ROR1
TRIB2
FGD4
ID3
NRXN1
SLC6A8
PNCK
FBXW11
ZNF436
RAD54B
FSBP
GAD2
BEND3
FIGNL2
KCNIP4
DHX32
LRRTM3
ZSWIM3
ACOT8
PCDH1
FRAT2
BTG2
FXYD5
FBXO40
NRARP
MTRNR2L8
WDR74
DUX4
LFNG
ZSCAN2
NDUFB5
MRPL47
LMCD1
PTMA
WFDC8
DNMT3B
IFRD1
MUC3A
ARID2
GRK6
MED25
FUZ
NOTCH1
CD99L2
SNRPN
ETV1
USP44
TRIM48
ZNF608
RIIAD1
DDX17
ABHD11
FGD3
ZNF775
PLPP2
MTRNR2L1
ETV4
GXYLT2
MTRNR2L2
MSH3
DHFR
PDPN
GADD45G
CYP1A1
TMCC1
ITPRIP
CELF3
GOLGA6D
FGFR2
GPSM3
TMEM47
BFSP1
PARP1
PREX2
LIN28B
SNURF
LZTS1
ZNF398
POSTN
SMCO1
TDGF1
NADK
FBP1
TRIM24
ECE1
FZR1
AMN1
MTM1
PER2
PSMD9
HPD
CAMTA1
PGPEP1
FAM120B
KMT2B
CCT2
SCGB3A2
SYT2
CHN2
PMEPA1
DDR1
ESRP1
SORBS2
TRIM2
TNC
NCDN
KIAA0319L
ZFC3H1
THAP2
GOLGA6A
DCAF4L1
RGS3
COL23A1
LIMCH1
RASGRF2
GJA1
KDM2A
TMEM41B
KCNJ1
ST18
HGS
ARL16
SPRY4
TTYH1
C1orf127
GPC4
SOX5
SELPLG
MCCC1
PLEKHG1
IFT80
SASH1
GET3
ZSCAN10
DOK7
OSBPL1A
FZD8
GOLGA6B
IQCH
AAGAB
OR2T1
NDUFS5
CYP2S1
SCAF4
NDST1
VWCE
RASAL2
FOXP1
DGLUCY
APOBEC3F
CYTH2
CTNND2
SHF
TES
KCNN2
RASA1
MYCL
ONECUT2
GDF3
TPST2
HMOX1
RBFOX2
CELF4
ARIH1
ZNF335
HOXD13
HOXD12
GOLGA6C
PNRC1
NANOG
ETS1
PDCL
CEP41
TNRC18
ACVR1
SLC35A5
ATG3
UTF1
SH3BP4
CCDC200
DICER1
SLC20A2
PEAK1
HMG20A
ALDH7A1
WNT5B
B3GALT5
BCL9
TOX3
CRYGB
RTN4
LOC100129484
OLFML3
PRR15
LINGO1
CDC14B
PLEKHB1
SPHK1
DAGLB
HES1
MYSM1
TUBB
MDC1
CAPRIN1
SRSF7
SNAPC3
IL34
EXT1
UNC13B
PCBP1
TOMM40
PYGB
LEFTY2
KDM2B
C1orf198
GNAI2
DTNA
ADAR
CCN2
C8orf58
PGK1
EPHB3
SYN3
SLA2
ADA2
EPB41L1
SRCIN1
TESK2
L1TD1
LYPD6B
NECTIN1
LRAT
MAP6
ECT2
LRTM1
DDX43
MMACHC
KDM3A
ZNF536
ABCB5
GTF2I
CARHSP1
CACNA1S
OCSTAMP
ERMN
LMNA
AASS
MACROH2A1
SLC33A1
TRIML2
VPS37B
WBP1L
VENTX
CAPN3
PGBD5
TIAM1
UNK
H3-3B
KLF3
CSF2RB
DLL1
PCYT1B
HES5
ZNF296
PANK4
GEMIN7
TJP2
FRG2C
CXADR
NPSR1
ANKRD6
PUF60
SMIM14
SNX19
BCAT1
CCDC169-SOHLH2
CCDC169
JPT1
OAZ2
RGPD1
DACT3
FAM181A
WDFY2
SLC10A2
NWD1
ZNF195
SRP68
AUH
MAGEB2
PAFAH2
LIN28A
SMAD3
ANK2
GLI2
CHD6
MRS2
KRT6B
RAX
SLC46A1
CRISPLD1
PPP2R3A
LHFPL4
DST
LRIG1
ZNF781
IL7R
NDUFV1
TRDMT1
PIN4
USP7
TMC5
CTBP2
ALDH1A2
MAST4
NTN5
STOX2
STK31
ITGB3
ZNF565
DPYSL3
FZD9
INO80D
MARCKS
MMP10
RGPD2
PACSIN2
DIDO1
SENP2
TIAM2
TSPAN14
GABRQ
DHRS3
PDE1B
SLCO5A1
NEBL
BORCS6
INSM1
SALL4
EMSY
GABBR1
FAM20A
CCDC33
ACOXL
KLF6
TP53INP1
MSANTD4
TGIF1
ABCC2
MOG
C20orf96
VOPP1
ACSL6
SIK1B
SIK1
RMND1
ARMT1
CDYL
GBX2
TNRC6A
TRPC4AP
OSBPL2
ATP6V1G1
CELSR3
ETFB
ESX1
TAGLN3
ANKRD40
NDUFAB1
H3C15
H3C14
H2AC19
H2AC18
UFD1
SMPDL3B
CDC45
IL21
TMPRSS9
AASDH
NKX2-2
DPH6
GCNT2
TMEM43
CHCHD4
DND1
KRT8
SORT1
G3BP1
ZBTB45
SPATA22
POLB
LONRF3
DPPA4
GABPB2
SLC2A14
ZNF814
SYAP1
ESRRA
CATSPERZ
FAM24B
GLDC
GCSAM
SLC3A2
PCDHB8
PCDHB16
LEKR1
SLFN12
KLF7
DET1
PXMP4
PRSS23
PIK3C2A
TMUB2
PXDC1
SIX2
PTAR1
LRRTM2
CTNNA1
TET3
ISOC2
LLGL1
TRMT2A
RANBP1
RNF19A
FRG2
FOXO6
ZFYVE1
TP53
AK4
SHC3
RNASE9
GABRB3
ARID5A
ZNF428
CDH10
ACCS
EPB41L2
SLAMF1
SPATC1L
SEC14L5
CCDC130
CHD7
PRRC2B
CCDC88C
FRS2
PDE4B
EPHA4
MID1
ABL2
TSPAN5
TMPRSS7
TLL2
BAHCC1
PREP
WDHD1
SOCS4
PPP1R18
NRM
ITPK1
ARMC12
RNF43
PCDH18
PITPNM2
VEPH1
LRGUK
DUSP12
C10orf95
SLC16A13
ZNF875
CCL2
UPF1
ZBTB2
CCL26
WDR44
IGBP1
C22orf39
SPIRE1
PRKAG2
NUAK1
ETV6
TTYH2
HMGN1
SAXO1
RRAGA
ZSCAN9
YIPF4
ARSL
KRTAP3-1
RBM20
RAB23
TRPM1
IFIT3
PSME3IP1
EXOSC9
TGIF2-RAB5IF
TGIF2
PDIA4
APOBEC3D
APOBEC3C
VASH2
FAM200B
JAG1
VEZT
SLC25A36
FGD6
PHC2
SUCO
SYNCRIP
RHBDD2
TMEM114
CNGA1
PRND
ELOVL6
PLCH1
ITGB5
HSPH1
ZNF552
NATD1
RIF1
MUS81
CFL1
VANGL2
FGFRL1
CDC42EP4
SPAG9
PRKCA
NACAD
STX16
PIK3R3
GADD45A
LRRC47
GFRA1
ANAPC15
TNFSF8
LEFTY1
MNT
SAPCD2
NEK3
LOC150051
SYBU
ADGRL2
TRIP4
SLC25A11
RNF167
PAN2
IL23A
NUP160
CNN3
PAK1
DLST
TLE3
RTBDN
MAST1
RAPGEF5
FZD5
DENR
CD2BP2
MEIS2
PRR5L
NEDD9
IFI16
ANP32A
PDE4D
AHNAK
GSPT2
ZFP3
CYB5R2
BAIAP2
LCOR
TUT1
MVB12A
RARB
SH3GL3
RAB30
COPZ1
SDCCAG8
CEP170
MIDEAS
OR6C3
IGFBPL1
RIMBP2
NEPRO
TCF4
STRA6
COL17A1
HDAC4
F11R
OGA
GSAP
RAB36
FZD7
TFE3
SLC2A10
CRB2
TRIT1
BBC3
PYCR2
TLE1
CDC25A
DTX2
GRHL2
ZMAT2
DNAJB1
TCF12
HLTF
RPL27
PDHA2
YAF2
WDR36
TIAL1
THRB
NIPAL1
RNF186
PES1
ZNF254
AHCYL2
SPATA12
MEF2C
HOXB1
DPP3
ZBTB40
UBAP2
TFDP2
CUBN
AKIRIN2
ZNF358
DHX8
PKNOX2
MEX3D
PTGS1
EGR3
TLX3
HELLS
GPR179
CTTNBP2NL
AKAP9
MOSPD3
PDGFA
ZCCHC3
C1QTNF7
RAB17
MTUS1
KIAA1522
LNX1
PTTG1IP
RESF1
PWWP2A
DISP3
NFE2L1
CPA5
ERGIC2
HSBP1L1
FZD3
CFAP20
YLPM1
FGF6
CSRNP2
ANKHD1-EIF4EBP3
ANKHD1
CLCF1
RPL23A
RAB34
IPO11
SLC23A2
MTHFD1
CCDC167
SCOC
TNP2
PRM3
TSKS
NUDT2
AP2A1
SINHCAF
RNF213
FGF19
PRUNE2
ABAT
IGFBP2
JPT2
ZNF202
ARSG
KLHL5
TCAF1
S100A16
TMEM132B
ADGRA1
TBC1D23
VIM
SKIDA1
CAPZB
SPIC
KIF21A
TCN2
SDHC
MAP2
GAST
CCDC81
TIA1
MBNL3
CNMD
RAI14
SMARCAD1
LYPD1
ARHGAP24
KNTC1
RIPOR3
PIF1
PEA15
RGS12
ID1
PYGM
PLEKHA5
LIMK2
ETV5
NCOA7
BAAT
CEP63
ANAPC13
MAP2K5
TCTEX1D4
SENP8
MYO9A
STK32C
LRRC27
ZMAT4
LRP12
NEUROG3
SEPTIN9
CCNT1
HECW1
ARF4
AKIRIN1
SYTL2
FAM153B
CAAP1
NKX1-2
PTPRN
KIAA2012
MEX3A
SEC22B
ASH2L
TSGA10IP
ZNF474
RERE
DNAJC7
DDX3X
ZIC5
ZFAND6
KLHL4
PAIP2
CUEDC1
EPB41L4B
TRPM3
GLIPR2
DHX9
TMSB10
RSPH14
ADRM1
PLPP3
FAM126A
DDX39A
DSCAML1
PRODH
LOC102724788
CHMP7
APOBEC3G
TCHP
SHROOM3
LPP
MTRNR2L9
KLF17
RFLNA
SYNPO2
SPHK2
RPL18
ID2
SMAGP
BIN2
LRP2
NFIB
ST6GAL1
ABCC10
FHL1
CSGALNACT1
RAD18
TNP1
METTL7A
SACM1L
UGT1A6
PCDHB13
KCNMB2
PYM1
DGKA
ZSWIM4
NUP214
ALDH2
TKT
RBBP6
PIMREG
MUC20
LITAF
EHD4
ZNF763
CDK5RAP2
FAM107A
TUBA1C
SOAT1
SLC4A8
RPL8
JUP
ANO3
ZBTB18
FGF4
BFAR
FAM102A
YWHAQ
C2CD4D
ZNF664-RFLNA
ZNF664
SULT6B1
CCDC92
PRTFDC1
BCL2L11
CCDC85A
NKIRAS2
UBQLN4
LAMTOR2
CMAS
KRBA2
STMN1
PCDHGC5
PCDHGC4
BBS7
TCF20
MFSD6
PTPN12
UHRF1BP1L
CDK6
ARHGEF37
LPCAT4
TINAGL1
TAS2R60
THBS2
NDRG4
SLC35D1
MAP1B
HACL1
BTD
QSER1
ISL2
KIF6
AJAP1
SPRED1
PLEKHG3
ATXN7
REXO4
C10orf120
ADAMTS13
SLC22A23
LRFN3
ZDHHC5
TMX2
MED19
RABGAP1L
NGB
CCPG1
C15orf65
HIP1R
ETFDH
C4orf46