ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX512370 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◣ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NES
CDX2
BCOR
SOX6
PIPOX
FGF1
MTF2
PPBP
PF4
SMARCA2
SACS
MUC1
NAV2
ANKRD1
SRRM4
GDF11
CD99L2
SOX2
LZTS1
DNMBP
LFNG
SPATA45
NFE2L3
OTX2
ADAM28
DUSP6
UTF1
IER5L
NRARP
NTRK2
APOBEC3D
APOBEC3C
ARHGEF38
ID3
ETS1
TGIF2-RAB5IF
TGIF2
NDUFB5
MRPL47
ZNF532
RMND5B
NANOG
CLDN9
OBI1
HMGB1
FAM227A
CBY1
PRICKLE1
GOLGA6D
FLAD1
TFE3
ABHD11
REST
SLTM
FBXO40
CARHSP1
AHCYL2
MRPL20
POU5F1
GOLGA6A
FBP1
FOXD1
NADK
RPH3A
DPPA5
GSAP
RAB17
KCNJ1
KIFBP
GNAI2
TMPRSS11E
CAPZB
PSMD9
HPD
GPRC5B
SAMHD1
METTL11B
CACHD1
CNMD
SNRPN
TCF7L1
DDX17
NCDN
KIAA0319L
AGO1
SGMS2
VCAN
PRAC2
PRAC1
SCGB3A2
EDDM3B
USP44
NRG1
ZCCHC3
TFAP2A
MED25
FUZ
TALDO1
CHFR
FAM180A
DOK7
MDN1
ESX1
SIX3
GOLGA6C
ZNF398
SHCBP1L
OLFML3
POSTN
GJA1
MAD2L2
DRAXIN
HES3
ICMT
FGD4
DDX43
HESX1
SFRP2
LINGO1
SLC2A14
PARP1
UBD
AASS
AFF1
GOLGA6B
BRINP2
HDAC9
VOPP1
DEFB114
DEFB113
TLE1
SLC7A5
PLPP2
TDGF1
TMEM47
PPP2R3A
DCAF4L1
LRRTM3
GET3
HOXD13
HOXD12
GIMAP5
OR5AR1
MRS2
PHC1
ETV4
PGBD5
SHISA5
RASGRF2
DHDDS
DAGLB
LMCD1
GADD45G
SNURF
PDCL
ZNF536
MAGEB2
DUSP29
DIDO1
ZNF343
SLFN12
TNRC6A
DPH6
FAM120B
DLL1
ZNF483
IFRD1
HOXB1
ST18
LIPK
LRRN1
ARHGAP21
SALL3
PDPN
MYSM1
PMEPA1
CACNA2D1
RARG
TRIM24
ZFC3H1
THAP2
BTG2
LRRTM4
SOCS3
LEFTY1
PTMA
RFX4
ALDH1A2
FAM222B
OR5F1
AASDH
BFAR
FRAT2
AJAP1
RNASE9
SMIM14
SUCO
FNDC11
FAM20A
PRPS1
ARHGAP42
SLC35A5
ATG3
SORBS2
GAD2
TIMP4
RASA1
TRIML2
DDX3X
CYP2S1
PITX2
WDHD1
SOCS4
ATXN3
ZFHX3
SCAF4
CCDC169-SOHLH2
CCDC169
FBXL19
FGF2
ZSCAN2
XK
GRK6
L1TD1
USP7
ZNF565
PILRA
NOTCH1
WDR49
SMAD3
MOG
ZNF202
PYGM
ZNF781
CER1
NDUFV1
PXMP4
FIGNL2
AEBP2
PLEKHG5
NR6A1
FGFR2
SOX5
RPL23A
RAB34
CDH10
OSTM1
ZNF484
EXOC7
PACSIN2
ZNF428
WNT5B
ESRP1
CHMP7
ONECUT2
MTHFD1L
DUSP8
UGT1A3
GPSM3
GCNT2
PCBP1
SLAMF1
TOMM40
CHD6
MFSD4B
DLX5
ZSWIM3
ACOT8
ZNF304
HOXD1
PANK4
HES5
SLC46A1
FZD8
FOXB1
TUBB
MDC1
PHF5A
ACO2
ATP6V1G1
SOX14
KCNN2
GLIPR2
HMOX1
HGS
ARL16
DLST
TRIM13
MECOM
SFXN1
LIN28B
CDKL5
KLRC1
TCAF1
HEY2
FAM153B
RTN4
CD200
TJP2
DMRT1
WDR74
PLAGL1
MMACHC
CSF2RB
IL34
CELSR3
FBXW11
TRAPPC8
TCF7L2
PLPP3
KDM2B
GRHL2
ZNF677
VN1R2
MBNL2
RPSA
IQCH
AAGAB
RAX
GALNT3
NXPH2
EBF3
KXD1
ARID2
PALM2AKAP2
ZFP3
PDHA2
CHCHD3
RGS3
SYN3
RTBDN
MAST1
FZD5
FERMT1
KRT13
SNAPC3
C20orf96
PDZK1IP1
TPST2
GRID2
GTF2I
EPHB3
LITAF
FZR1
SLC10A2
ANKRD40
TP53
SLC39A8
DUSP12
ARSD
PRDM14
HECW1
TRIM2
ACSL6
MUC3A
MACROH2A1
CAPN3
SOAT1
MED12
CCDC88C
TRIB2
NMNAT3
MOBP
SLC25A36
AKR1D1
TBC1D16
ARHGEF19
MTRNR2L8
FGD3
HBG2
ARF4
DDX59
C1R
PUF60
PTCH1
TSGA10IP
GCSAM
DUX4
MTRNR2L1
TIAL1
GABRQ
NCOA7
GSPT2
TUT1
MSC
ARID5A
ZSCAN10
TMUB2
TAL1
GDF3
ZNF101
ATP13A1
SRPK1
TSNAXIP1
RANBP10
ZNF296
GEMIN7
GABRB3
CCDC85A
IL1RAPL1
CELF4
ESR1
DET1
NOXRED1
SMIM6
PTAR1
STOX2
LONRF3
NFE2
ACADM
MAPK8IP3
SAMD5
VMO1
GLTPD2
FAT1
TRIM38
HSPA13
ENOX2
NDUFAB1
GLB1L3
FAM200B
DCAF4L2
EXOC5
AP5M1
LRAT
DHX32
MTM1
PSIP1
WDR44
LRRC47
HSBP1L1
RIIAD1
CELF3
BBC3
ZSCAN9
MEIS2
USP53
SYAP1
UBQLN4
LAMTOR2
ISL1
TRMT2A
RANBP1
GOLGB1
MSI2
TMEM87A
GANC
FILIP1L
C7orf57
PDGFA
ZNF600
CTBS
SMCO1
SRSF7
ZNF875
PRUNE2
HLA-A
RPL8
ZNF517
SCD5
THEM4
KMT2B
RMND1
ARMT1
RAB30
BEND3
NFIB
TTYH1
SLC16A13
F11
C10orf95
LIMCH1
LRGUK
UBOX5
FASTKD5
CAPRIN1
RIPK4
AMN1
PEAK1
HMG20A
PCDHB5
PRDM16
NOSTRIN
MCTP2
TMC5
EIF1AX
CDX4
ZNF814
GID4
ATPAF2
ANK2
CYTH2
BORCS6
ZNF649
CCDC124
ZDHHC1
PTPRN
HS6ST1
NTN1
ZNF608
CTSF
CAPN1
OR6C76
SLC24A2
SPIC
QSER1
RIF1
ST6GAL1
ALPP
PPP1R16B
ANAPC15
UQCRC1
SFPQ
PHOX2B
CYP1A1
ABCB5
TRAK2
STRADB
ZNF518B
PLAAT4
JPT1
SRCIN1
SULT6B1
NEPRO
ERBB2
PGAP3
PTPN2
CDH11
SPRY4
CDC14B
NKX1-2
NPAS3
FEM1A
RBFOX2
PDIA4
SAPCD2
UAP1L1
WFDC1
SNX19
ETV6
IP6K2
EPHB6
PREX2
DACT3
SLC33A1
VPS37B
C1orf127
FAM110D
CFAP20
MTHFD1
TNFRSF11A
FOXN3
CDK17
STK32C
LRRC27
SLC6A8
PNCK
BHLHE22
PRKAG2
SACM1L
IL22RA2
NR2F2
JMJD1C
NRXN1
EXT1
FAM24B
EXOSC9
ZBTB8OS
RBBP4
PAN2
IL23A
RPA2
CLCF1
GUCA1A
EPHA4
APC2
TRPC4AP
CDH9
ZNF436
HOXA1
DPYSL3
GADD45A
SKIDA1
MLLT10
JADE1
PIN4
MSANTD4
ARID1B
AIG1
INO80D
HECTD4
GLDC
CDK6
FXYD5
ZBTB39
STRA6
KLF3
TBL1XR1
E2F7
SASH1
BMP2
TOX3
ZBTB45
TEAD4
PBX1
PSME2
EMC9
ZNF729
LEKR1
TKT
AKIRIN1
ZIC4
C8orf58
ID1
SLC24A3
SDHD
LCA5
ACVR1
NKX2-8
KIF3C
KIAA0895L
CDX1
SCRG1
ARSL
SVOPL
CACNB2
ADGRG7
ZIC2
CEP41
SPRED1
DPPA2
LCP2
GCLC
SP8
WDR36
FOXP1
YAF2
PHACTR2
WNK3
ARIH1
CCL2
VCPKMT
TNC
DPPA4
ASMTL
DDX49
COPE
POLR3G
MBLAC2
NECTIN1
HES6
ZNF664-RFLNA
ZNF664
CCDC92
SHKBP1
LRIG1
IFI16
NEUROG3
PELI1
PRR15
TSPAN5
AKIRIN2
SEPHS1
PLA2G1B
ETV1
CDC25A
MCCC1
LEFTY2
CLCC1
PSMB7
CRYL1
RGCC
ARAP3
TTBK1
PNRC1
UNK
H3-3B
ABCC2
GATA3
TBL1X
FERD3L
MAP6
RHBDD2
SLC2A12
ZNF738
SNX16
KCNIP4
SDCCAG8
CEP170
SGMS1
CD4
GBP6
SMARCAD1
MEIG1
CHN2
SALL4
CPVL
EP300
G3BP1
SLC3A2
RAD54B
FSBP
VSIG10
PAXBP1
WDR33
FGF4
ZNF85
HMGN1
ZNF469
RAD23B
DTX2
TSKS
AP2A1
SDCBP
CTH
MAPKAPK2
VANGL2
TNFSF8
GJA10
IGFBP3
SEC14L1
AHNAK
PTPN12
UNC13B
SCOC
PLAC8
ZNF775
EMSY
ZNF763
UXS1
RASSF8
CCDC174
PRCC
MFSD6
ITM2B
OLAH
HOXA11
C16orf74
TMEM41B
HHIP
KNTC1
ZCCHC12
ZNF749
TESK2
GALNT8
C1orf167
QPRT
RPUSD4
FAM118B
GRIN3A
GRIA4
TIMM17B
PQBP1
TLL1
SLCO5A1
ZBTB40
WASF1
CDC40
LHFPL4
ZNF3
CLDN23
SPHK2
RPL18
STEAP3
TFAP2D
CSRNP2
LARP1
SP9
TASOR
MTA2
RCN1
ACSL1
CDC42EP4
MVB12A
ZNF589
A2ML1
CSGALNACT1
PAG1
FOXO4
SCNN1A
LTBR
HIP1
EGR3
ADGRA1
PRODH
LOC102724788
AMOTL2
PER2
BIN2
THBS2
ISL2
MAPK10
MAGEB17
MEA1
RAB5C
PES1
TCN2
SLN
CTIF
MED4
ADCK1
PLA2G3
DENND2A
HOXB2
CXADR
KDM2A
KLF6
DPP3
INKA2
DDX20
TLE6
RAB5A
EFHB
FOXB2
SLFN12L
DST
UBAP2
TRH
OAZ2
TBC1D17
AKT1S1
RNF144A
TDRP
OLIG3
RTN2
PPM1N
APELA
CCN2
ROR1
MRPS30
NDUFB4
CASP7
DENR
FAM98A
TMEM70
ELOC
EPB41L1
TGIF1
RAB36
RSPH14
WLS
INSYN2B
NEBL
C22orf39
S100A16
EIF3F
TFAP2C
PPP1R15A
PLEKHA4
L3MBTL2
SPATA22
YEATS2
FGR
STX18
ZNF195
RAB15
INTS9
HMBOX1
GLRB
OGA
DLG2
CA2
EID3
ZSWIM6
HSP90AB1
OR51H1
TES
ARSG
SDHC
CHD8
NKAIN4
CHMP4B
GXYLT2
NEUROG1
SLC7A7
BCL9
AUH
PCDH18
SLC22A23
LAMP5
N4BP2L2
FAM47E
FANCL
FAM47E-STBD1
DCLK1
ADD2
ADA2
SPATA12
YLPM1
SHROOM3
RABGAP1L
H2AZ2
WBP1L
CSF3
ST6GAL2
ARX
STX16
RPRM
PLIN2
ADAR
KDM3A
TLE3
KLF5
SPAG4
AIFM1
VPS50
HEPACAM2
RPL9
LIAS
LRRC6
LYPD6B
SMPDL3B
STAC3
RBMX
CCDC172
RAB4B
MIA
IL17RD
SLC39A14
GUCA1ANB
CNGA1
NIPAL1
TRIM5
TRIM22
EMD
XAB2
PCP2
ZIC5
DPYSL2
NOG
ZNF175
CTNND2
PIF1
GPM6B
TRAPPC3
KIF26A
ZNF665
MAP7D1
NDUFA2
IK
PTPRF
VIPAS39
AHSA1
STK3
OSR2
DHRS3
RPL27
TTLL6
SET
SMCHD1
ARMC3
BDH1
ESRRA
CATSPERZ
PYDC5
RAPGEF2
OXA1L
TCHP
TCTN3
NPSR1
GDPD2
OAT
BTG1
OSGEP
APEX1
ZNF630
CITED1
NDUFS5
CDH4
CLDN19
MTRNR2L2
MSH3
DHFR
THRB
PTX3
SKIL
PRLHR
MAGEB3
KLHL13
PAX2
NRG3
ATAT1
ZCCHC8
SNX27
HRG
GNAS
ACCS
IFIT3
SFRP1
P2RX6
FZD2
RNF186
KLHL5
TRPM3
BAMBI
BCL11A
TSSK4
TSPAN14
CA8
WDFY2