ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3205373 | Head and neck squamous cell carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◣ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

MTF2
NAV2
NRARP
IQCH
AAGAB
VANGL2
MAMDC2
RCOR1
TRMT2A
RANBP1
CCDC88A
FZD1
INTS12
GSTCD
BAHCC1
SLC33A1
NOTCH1
UNC13B
SNX16
JMJD7-PLA2G4B
JMJD7
WDR74
MLEC
WDFY2
VWCE
GFM2
ADAM28
TNRC18
LOC100129484
ATXN7L2
PTMA
ZBTB40
KDM3A
ARID2
TJP2
PEX3
ADAT2
POLB
MTRNR2L1
GBA
TRMT1
NACC1
NDUFB5
MRPL47
RAET1E
WDR36
HEXIM1
RFLNA
IPO4
KLF7
CEP63
ANAPC13
ZFAND3
OGA
TUT1
MRPS14
PER2
CFAP20
STAU2
ZNF335
PGK1
ZSCAN2
PTCHD4
F11R
SYNCRIP
RASAL2
LIMK2
MTRNR2L8
HSPH1
PPDPF
BARHL2
RTRAF
ASF1A
TSC1
GFI1B
MRPL48
TMCC1
FAM168A
CCDC152
SLC9A9
PIK3CA
COL9A2
ACOT1
HSPA4L
HMGB1
PYCR2
USPL1
TUT7
FAM227A
CBY1
PACSIN2
CYTH2
ZNF195
HEBP2
FRG2C
SOX14
ZNF37A
KLHL6
RAB23
KRT6A
MYEOV
LGR6
MRPL44
H4C12
NDST1
FNBP1L
SECISBP2
FRA10AC1
GSN
LSG1
SSBP1
ARIH1
YLPM1
DDX17
MTRNR2L2
MSH3
DHFR
KMT2A
FANCI
NOXA1
SLITRK3
FGF19
GABPB1
PAXBP1
TMEM205
CCDC159
RAB3D
BZW2
ANKMY2
TMEM88B
ANKRD65
CAPRIN1
ZBTB6
CHD8
MOB3C
PTPRK
PAN2
IL23A
CCDC200
FMNL3
OGT
CELA3B
MED23
ITGB1
JUP
KDM2A
ZNF440
ZNF426
MRPL3
AP4E1
LY6G6D
BCAS1
GOLM2
DKK1
CLPB
GRK6
ANXA11
SKIL
NREP
GBP6
UBTD2
MUS81
CFL1
ANAPC15
PHF5A
ACO2
BMS1
NUPR1
CYP2S1
ITPRIP
RMND1
ARMT1
PPP1R18
NRM
DKK3
SHC3
DSTYK
C17orf75
EIF4A2
MSANTD4
SOD2
WTAP
INSM1
KMT5B
PGBD2
MRPL21
IGHMBP2
TMEM132A
FSCN1
TMPRSS4
C8orf58
STMN1
SPIN1
RAPGEF5
USP30
ADRM1
PAFAH2
CHD6
CLTC
POLR3E
SLC29A3
SHF
GREB1
DUSP6
ALCAM
LMX1B
RARB
ESRP1
GPR137
PRKCI
C19orf67
DGLUCY
FAM83G
EDN1
SLCO1B3
H4C14
EIF3F
GALK2
COPS2
CEP41
ID1
RBBP5
TIPARP
MTMR1
TMEM242
AAR2
TMEM41A
PSME2
EMC9
RNF31
ZNF524
FIZ1
RPL27
H4C11
SLC25A45
FRMD8
TRAK2
STRADB
PPIP5K2
CYB5R2
COX16
SUGCT
MPLKIP
DUX4
MNAT1
SPHK1
TRDMT1
IRX4
SINHCAF
NCOA7
BRMS1
B4GAT1
MUC3A
PTGES2
MCCC1
STX16
ZNF106
SNAP23
OTUB2
TES
KNL1
CAV2
MRPS31
ALDH7A1
PHIP
RBFOX2
NUF2
FBXL19
NFIX
COL17A1
POLG
ZNF791
ZNF490
ADAR
NUP160
SLC44A1
GPSM3
CSRNP2
NSUN6
ARL5B
ZNF408
ARHGAP1
SLC35A3
SPATA12
GAS1
ZBED5
NDUFS3
KBTBD4
TMEM101
YEATS2
NPIPB4
YWHAQ
MTDH
SRPRA
YDJC
CCDC116
MIDEAS
CEMIP
ZSCAN9
MYMK
KLF1
GCDH
ABCA13
GET3
MARCKS
ZBTB8OS
RBBP4
HEXIM2
EXOC5
AP5M1
ITGB4
ATAD2
CACYBP
UBE2B
CDKL3
NIBAN2
N4BP1
NFKB1
UBB
C15orf62
TRIM48
MRPL42
SPRED1
H4C15
GPR84
NPIPB8
TEFM
GTF2H4
VTA1
NMBR
GTF3C5
PLPP2
RBM39
ARL2BP
ARMCX5-GPRASP2
ARMCX5
TBC1D13
PPP1CC
TBPL1
COMMD2
RTTN
MAPK6
LNX1
NASP
FAM220A
CELA3A
GTF2H2
TCF12
EIF3E
OLFML2A
SGCA
ZNF627
LTBP1
CHMP4B
SMUG1
DNTTIP2
C11orf49
ANKRD40
NCBP2AS2
NCBP2
MAP3K9
NFE2L2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
C2orf42
DISP3
PIMREG
SMARCE1
SELENOH
ASXL1
MAPRE2
PRKDC
MCM4
NPIPB12
NPIPB13
PSMB7
USE1
ANKRD22
CCT2
RTN4
HMGN1
UBE2F
CUEDC1
LPP
PTX3
NR6A1
SLC24A1
NTMT1
EFHC1
SRSF6
DRG2
PHF21A
NPAS4
NDUFS5
WDPCP
MDH1
GTPBP3
ANO8
CALM2
CHD2
PNRC1
ZBTB26
BCAR3
GTF2H2C
GTF2H2C_2
ADGRF4
SCOC
KAT6A
MEGF9
GLIPR1L2
STK35
PALD1
KLHL24
RCOR2
FAM227B
DTWD1
ALG10
ETV4
FRG2
CLCF1
PAIP2
RALGDS
MS4A2
UFD1
CDC45
COPS7B
PDE6D
ZER1
TRUB2
RUVBL1
COQ4
EGFR
EXOSC2
SSBP2
MNT
FGD3
PCNP
SFT2D2
ESRRA
CATSPERZ
ID4
SNAI2
UNK
H3-3B
BORCS6
RBL1
POR
PPP5D1
CALM3
SLC3A2
SMARCB1
POLR2M
ACOT2
CCNL1
POLDIP3
CCNG2
C16orf46
GOLIM4
ZMPSTE24
RABGAP1L
CD55
WDR24
GARS1
BRF2
IFRD1
RAPGEFL1
ZKSCAN8
FAM98B
HNRNPDL
ENOPH1
TSNAXIP1
RANBP10
NME1
TRIP4
PIH1D2
NKAPD1
CHST15
FGF7
TMEM41B
ZNF391
NELFCD
DMAP1
FHL2
AGO1
OAZ2
UQCRQ
GDF9
ARL14EP
AADAC
NPIPB5
RPS7
LFNG
DLX5
GADD45GIP1
SMCO1
ABCC10
TCF7L2
PSMD3
CLEC2B
SPRY4
VIT
EDARADD
MACROH2A2
FIBP
MAP4K4
CTSW
NHLRC2
LRRC37A3
DCLRE1A
PDIA4
NEFH
AQR
FCHSD2
FGF1
CREM
BRWD1
RAB20
PC
SYT1
C18orf21
HR
CDK5R1
UBASH3B
KLF12
FOSB
HSPE1-MOB4
HSPE1
HSPD1
PLEKHO1
NAB1
IQSEC3
ERAP2
ZDHHC5
CCND1
TPR
ODR4
CAMSAP1
RAD23A
NPIPB11
C1D
CTNNB1
AHSG
CSTF2T
MEIG1
ALS2
ZNF443
ZNF326
GATA6
STK32C
LRRC27
IREB2
PRXL2A
SLC35E2A
USP6NL
EIF1AD
BANF1
MRPL16
RAB18
PRMT5
USP14
ZNF76
KMT2B
TMSB10
CPT1A
ZNF561
FXR1
BACH2
PPIA
NSFL1C
USP47
PDXDC1
ID2
H4C9
EPC2
SDK1
TTC32
BHLHE40
SERPINB5
ATF4
FANCF
FAM83B
ZNF33A
ONECUT2
TMEM68
TGS1
ANXA2
NR1H3
ACP2
SYAP1
GPR39
CDK12
PPP1R9B
PSMD14
C11orf95
ZBTB25
ZBTB1
HDAC9
RFFL
LTA4H
RBBP8NL
ZNF117
CCDC88C
HBP1
YWHAZ
LRRC8A
KYAT1
SCPEP1
DSG3
TSPAN14
CPNE2
BLOC1S5
SRSF7
ZNF292
SRSF3
RILPL1
CCDC24
IST1
FOXP1
AP2B1
METTL9
POC1B-GALNT4
POC1B
GALNT4
DPY19L4
ATAD5
IGF2BP2
DNASE1L2
TIA1
TINAGL1
FAM3C
ZFAT
ISY1-RAB43
ISY1
SMC2
DAPP1
GADD45G
C15orf40
CEP120
MTBP
MRPL13
ISL2
SFPQ
PCSK5
TOP3B
TMEM87A
GANC
PPFIBP2
TMEM102
FGF11
PEMT
ZNF518A
TMEM230
ERLIN2
ZFC3H1
THAP2
C2CD5
PALMD
JMJD1C
CCNJ
UCKL1
DUSP1
SPINT1
FAM171A2
TRIM29
PHKA2
LRP6
PBLD
HNRNPH3
PPARGC1B
BCL9L
ZNHIT2
MRPL49
FAU
KSR1
EIF2D
SNX27
FIGNL1
MLLT11
CDC42SE1
GFM1
WDR27
FARSA
CALR
C6orf120
SOX2
SYT2
SLC25A36
WASF1
CDC40
VCPKMT
CLP1
LY6G6F-LY6G6D
LY6G6F
ABHD16A
RAB14
ZC3H6
KRT80
WDR11
CCDC117
ALKBH3
POU2F1
SPRING1
RNFT2
TP53I3
ERCC6L2
ZNF354C
RAD51AP1
C12orf4
TTC14
TSEN54
STX10
IER2
CASKIN2
PMEPA1
FAM83A
PSMF1
GTF3A
FETUB
CENPE
EPB41L1
TPM1
ZNF184
FRY
PSMD1
CHMP1B
SNX8
TMEM249
SLC52A2
FBXL6
OPA1
ABLIM1
MAN2C1
ZNF124
ANKK1
NPIPA3
NPIPA2
RASA2
TIMM22
SLC36A3
SHOX2
RSRC1
HNRNPA1L2
LLGL1
MAPK8
TMC1
COPS7A
MKRN2OS
MKRN2
YIPF2
TIMM29
FKBP5
ANKRD39
HGS
ARL16
ZSCAN12
PHF14
PTPN6
C12orf57
PRPF18
PLEKHG4B
ADO
FOS
BAZ1B
PRDM10
TMEM79
SMG5
DPP3
EMC4
KIAA1217
ANAPC5
TEX9
RFX7
AHNAK2
KIAA0895L
ICE1
FANCC
HEG1
FURIN
NR4A1
NADK2
ZNF24
SPO11
FRAT1
VDAC2
DET1
SAXO1
RRAGA
ZFP36L1
DOCK9
PRKCSH
CCDC151
RPS26
GMEB2
ZNF668
ZNF646
HNRNPAB
SLC38A2
NUDCD1
CA12
GPR158
DEK
RMI1
HNRNPK
ZNF775
SIX2
DHX8
MRPS30
MCM7
AP4M1
UBALD2
ACOT7
HSPB3
ANXA8
OR2T1
HES1
GNA12
LRRC8B
NUP93
SLC9A1
ITGB3BP
EFCAB7
ANKRD12
PTEN
KLLN
METTL15
KIF18A
MED25
FUZ
KLF6
CD2BP2
MAPK10
ETNK2
KHDRBS1
STAT3
HS6ST1
PRDM2
NBPF1
LAMP1
FEM1B
PKM
BACH1
WDR54
C2orf81
SPRR4
RCC1
HUS1
TSPAN5
ARHGAP42
SIRT4
CORO2B
MEOX1
TANK
TLE3
ELOVL5
DHX36
RBM25
NR2E1
DNAJC25-GNG10
DNAJC25
KLF4
H3C3
H2BC3
GNAL
KLF3
ETV5
MRPS23
RGMA
HOXA9
WDR97
MAF1
SCAND1
ATP5MC3
PRADC1
CGAS
CCT7
SCAF4
GABPB2
GOLGB1
TRIB1
GID4
ATPAF2
RPL5
SF3A3
SUGP1
MAU2
SECISBP2L
INPP4B
FRAT2
POMGNT1
ZNF785
SS18
SLC20A2
MIDN
NCOA5
ZNF189
MRPL50
CDH13
CALM1
PRKG2
JRK
TOR1A
RPS29
SF3B6
FAM228B
AURKAIP1
LONRF1
ZXDC
ZDHHC2
CASC3
BIRC3
G3BP2
ZFHX2
THTPA
FKBP3
FANCM
MPHOSPH10
MCEE
TXNDC9
SNRPD3
GUCD1
EIF5B
GSTA4
ZNF799
RNF19A
GRHL2
TIAL1
TCTEX1D4
DNM1L
KANSL1L
SMC3
BTBD19
NME7
BLZF1
MEF2A
TADA1
LSM5
ZDHHC6
VTI1A
TLE1
LPCAT4
ZNF277
DOCK4
KDM7A
DNAH5
MRPL53
NIPBL
ARHGDIB
LDLR
FAM107B
RHEB
UBE2D1
MTERF1
COP1
PDE4D
ERGIC2
ZMIZ2
PCBP2
SRP14
COPB1
ATG10
SLC39A3
H3-3A
EEF1A1
UBOX5
FASTKD5
NUDT3
OR2A1
VPS8
RPS20
SCAMP5
OR2A42
ZSCAN30
STAT6
COL4A6
COL4A5
BARHL1
SNAPC3
FZD7
LMO4
ZNF750
UBE2E3
ZNF675
RPS3A
MRPS15
CTXN3
U2SURP
NUDCD3
CIPC
TRA2B
ZSWIM4
GTF2IRD1
BNIP1
SULT1C3
RS1
RNF121
PPEF1
PLEKHA2
LOC100133315
SMAD3