ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC4 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◣ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MTRNR2L2
MSH3
DHFR
WDR74
MTRNR2L1
MTRNR2L8
DUX4
SPATC1L
SNX16
RGPD2
RGPD1
HDAC9
FRG2C
ADAMTSL1
SP2
CABCOCO1
MTRNR2L9
FRMPD4
TNFRSF19
COL23A1
ARID5B
MAMDC2
FRG2
KATNB1
MUC3A
H4C15
H4C14
H4C3
H1-6
EVI5L
MTRNR2L10
EMILIN2
CCDC90B
DNM2
PCM1
ZBTB38
POLR3F
DZANK1
SF3A3
RBBP5
CLPB
SCNM1
LYSMD1
TEPSIN
NDUFAF8
KHSRP
SLC25A20
TARS2
DDX23
BOD1
FNDC3A
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
YJU2
PAFAH2
NAV3
SLC8A1
H4C11
VPS50
SSBP1
HEPACAM2
PPP5D1
CALM3
RFX1
UNK
H3-3B
TMEM115
CHMP4B
CCDC200
CDCA3
TOP2A
EPS15
INTS1
IARS2
BPNT1
TCEA2
GBA
DDX49
COPE
IFRD2
TACO1
RWDD1
CCL3
PSPN
ALKBH7
SYT7
ATP6V1G1
SLC25A25
SP1
EHF
TBL1X
PRR14
RPAIN
PHF12
NUP88
FBXL19
H4C12
H2BC4
H2AC6
THRAP3
INO80C
FEM1A
SF3B6
MAPKAPK5
FAM228B
CSDE1
AP2S1
HNRNPUL1
BRWD1
SMARCD2
H4C2
H3C2
MTOR
GLIPR1L1
CAPS2
COMMD1
CCT4
WDPCP
NDUFS3
MDH1
KBTBD4
TSN
TRAPPC9
PTEN
KLLN
FAP
NUF2
IRF2BP2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RHOT2
INTS10
GALM
UBE2J1
CIC
TMEM107
LSG1
TSNAXIP1
RANBP10
AURKAIP1
ST3GAL2
PRCC
MYOM2
PMF1-BGLAP
PMF1
PHB
CCNL1
SUCLG1
RPS20
MRPL24
ARHGAP17
TJP3
LARS1
SIX1
PHF19
NLK
BANP
PNKP
ARHGEF1
NEBL
ID3
ARID2
PEX14
DFFA
ARHGEF2
SSR3
FAM168A
SMPD3
ENPP4
CLIC5
KLHL29
TSSC4
TSC2
NTHL1
RAG2
PRRG2
NOSIP
IFTAP
PPRC1
OR4M1
LRRC29
CALR3
C19orf44
TOMM40L
NUDCD1
DENND1B
APOA2
TOM1L2
NCLN
DRC3
AK2
PAK1IP1
MMACHC
C6orf52
TRIP10
GPR108
RAB5B
KLF2
PROSER3
HSPB6
PWWP2A
ZFYVE1
TATDN3
SSBP2
PPP1R12B
NSL1
GSPT1
BAHCC1
ATP2C1
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
OR4Q3
KLF6
FUT10
SPSB3
NUBP2
HNRNPC
FLAD1
LRCH4
GATB
FBXO24
INVS
ERP44
PES1
COMMD9
RAB11B
NAIF1
MRPS18C
HELQ
VIPAS39
RAP2B
AHSA1
NDC80
METTL4
C1orf198
NGB
GCLC
PEMT
LNPEP
RPS3
METTL26
ZNF17
MDM2
CCDC146
PIGL
NCOR1
DHX8
COX16
BABAM1
SCT
CDHR5
RPL37
ING4
ACTL6A
RUFY3
ZNF417
H4C4
PANK4
HES5
TRIP4
EIF2AK3
CXCR5
CCL5
CCDC39
BMF
UTP3
TMEM256
NLGN2
SPAAR
HRCT1
MDM4
KRR1
ID1
TMEM11
SMCO1
ZPBP2
PIN4
IKZF3
SP5
NCOA7
MNT
SRSF11
LRRC40
ZNF286A
TBC1D10B
PNKD
MYLPF
KHDC4
ILF2
EMILIN1
C16orf91
AAMP
ZNF608
STIP1
NUP107
NAT16
HCAR3
CHST12
CCAR2
C8orf58
BUB1B
ZNF268
OSBP
ANP32C
MED27
KMT2C
GPR137
EML2
DPP9
DDX41
GUF1
NOP16
HIGD2A
POLG
GSK3A
FGG
CRYAA2
CRYAA
ZNF547
XAB2
TRAPPC2B
SLC35B1
RGS8
PCP2
SKA2
PRR11
KANSL3
FER1L5
TJP1
NDUFS7
UBE2H
TTI2
INTS9
HMBOX1
DRAP1
C11orf68
TULP2
NUCB1
LOC102723996
ICOSLG
DYNC1I2
COMMD2
USP3
MTRF1
TFPT
TBL1XR1
PRPF31
CCM2
TMEM70
MRPS23
HSD11B1
ELOC
CDYL
CDC20
ZFPL1
USP30
TMEM262
TMEM242
PSMD4
CNIH4
CDCA5
MED23
LIME1
SNX17
SCAF1
RRAS
RCAN1
NOC4L
EIF2B4
DDX51
WHAMM
RPS7
RABL2A
FSD2
EXOC3L1
E2F4
TRIM48
RANBP2
GTF2H4
FMO4
ZNF211
TP63
BBX
ZNF687
SYMPK
RPL32
PNPLA6
FOXK1
FOXA3
FAAP24
CYCS
CEP89
NUDT13
LEFTY2
CMSS1
C19orf53
TM4SF18
SLC39A1
NEDD8-MDP1
NEDD8
HOOK1
GMPR2
CRTC2
AQR
ZCCHC4
RAD51AP2
C2orf42
ZNF165
TPST1
RAD51AP1
C16orf72
C12orf4
WBP1L
WAPL
UBQLN4
SELENOH
LAMTOR2
TBP
STAM
SSBP3
PSMB1
PHB2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TMTC3
INSR
CEP290
ZSWIM3
SATB1
KDSR
KBTBD6
FCF1
CSNK1G3
COX7C
CCR2
AREL1
ACOT8
TIMM21
STK25
H4C5
H2BC7
FBXO15
EMC4
CRB1
ABT1
SPTLC3
KIF16B
TIMM22
NUP205
METTL3
LRRC14B
PRPF18
ATG4C
TMEM109
TBL3
SLC33A1
PRPF19
NR1H2
MRPL11
CCDC77
ZNF628
ZNF337
STAP2
PSMB6
NDUFAF5
MPND
ESF1
DPEP3
DMAC1
CAND1
TNFRSF12A
THOC6
LUC7L2
HCFC1R1
GALK2
FMC1-LUC7L2
FMC1
COPS2
STOML2
MFAP3L
ERVMER34-1
EPYC
COPZ1
CCL3L3
CCL3L1
BUB3
ZNF451
ZNF225
ZCCHC8
WDR46
TYK2
SMG8
SEC11C
RBM28
PFDN6
MRPL30
MITD1
ZNF609
TLR5
TCERG1
RPS6KB2
NR6A1
MICOS13
HSD11B1L
ZMYND8
SCGB1C2
SCGB1C1
RGS3
RAP2A
NFKBIL1
MYCBP2
MRPL53
MRPL28
EPRS1
DDX39B
ATP6V1G2
OAZ3
DHX16
CLEC7A
ZC3H12A
SHPK
NPIPB5
NDUFB5
MRPL47
CTNS
CHD6
TOR1AIP2
TOR1AIP1
SPHK2
SMARCAL1
SLC35E2B
RPL18
PSENEN
PNISR
NFIB
MEIS1
LIN37
KRT15
GTF3C3
GSTO2
GORAB
FAM83E
BIN2
ZSWIM1
UNC93B1
RPL35A
RAB40B
PPP6R1
IQCG
HAX1
ECT2
CRYBB1
ANAPC5
ZFYVE19
VWA5A
SLC9A1
PSMD11
OXCT2
MAPKAPK2
KLHL20
HEMK1
DNAJC17
C3orf18
ZNF383
PLCD3
NPRL2
DMAP1
CYB561D2
C12orf43
ATP5MG
ATP5F1B
ARNTL
ACBD4
ZSCAN22
TDRKH
LTA4H
UBAC1
SMARCA4
RPL14
IFIT1
SIRT4
MGP
ZMAT2
VRK1
TSC1
SUFU
PSAP
MTFR2
GOSR2
GFI1B
ACTR1A
ZNF140
TRDMT1
TOMM40
MACIR
TUT1
SCAMP4
PPP1R12C
MYNN
EMX1
CTU1
CLPTM1L
ADAT3
ACTRT3
ZNF668
ZNF646
UFD1
SH3GL1
PSMC5
P2RY10
OCSTAMP
FTSJ3
DAPK3
CHAF1A
CDC45
VPS25
UBR2
POLDIP3
NSMCE3
FAM207A
CSTB
TMEM94
TFB2M
STT3A
CYP2R1
CNST
CCDC61
KIF22
ITGB1BP1
CPSF3
SEL1L
ZBTB5
CCDC174
ZNF718
ZNF595
ZMPSTE24
STBD1
SLX4IP
PGP
MKKS
LCOR
FAM184A
BRICD5
TTC21A
RAB11A
LOC101927572
GTF2H2C_2
GTF2H2C
GORASP1
FBXO38
ALKBH6
WIPF1
UBE2I
RSF1
POLR2J3
PEX3
MCRIP2
FARSB
CA11
AHCYL2
ADAT2
AAMDC
ZNF444
UFSP2
TMEM218
STK17B
SIRT2
NFKBIB
LYZL2
GGCT
CDK5RAP2
C4orf47
UTS2R
TRNAU1AP
SRI
KCTD5
KCNN3
KAT7
DNAJC14
CCDC167
TAS2R38
NAA35
MRPS7
GSR
GGA3
ATP5MC2
VCPIP1
PTDSS2
OSBPL2
C8orf44-SGK3
C1orf159
ADRM1
SNAP47
SACM1L
JMJD4
FRYL
FDXR
DDI2
CRADD
CDC23
ZBTB32
TNFRSF17
TIMMDC1
NPIPB2
NBEAL2
KCNH1
FAM187A
EFTUD2
DDX1
CCNC
CCDC103
SMARCE1
SEC13
NMT1
ISOC2
GOLPH3L
FMO1
DCAKD
SUGP1
RPS27
RAB13
NUCKS1
MAU2
IDH2
HSD17B4
HEXIM2
FASTKD1
TRAPPC3
TMEM60
PHTF2
PCDH1
NCBP2AS2
NCBP2
MORC3
HEXA
HARBI1
G3BP1
DCP1A
CLN3
ATG13
APOBR
ZNF773
ZNF691
TLE3
TLDC2
TAF3
KRT23
ZNF548
RARB
AP2M1
UBE2T
POM121
LMAN2
INTS4
GATD3B
GATD3A
CHD9
ZNF519
TRAPPC6A
RPL27
PPP1R37
MRPS17
MKNK2
GABPB2
EMID1
BLOC1S3
ALG10B
AHCY
PRICKLE4
LRRC45
HEXB
FRS3
FBXO11
CENPX
ARL1
TLR4
TAB1
RSPH6A
NR1D1
MT2A
MLLT1
GTF2H2
FLT3LG
EXD2
CD2BP2
ZNF500
ZC3H10
UBC
TSNAX
RPL41
PSMD5
PDE6D
FAM72D
FAM72C
COPS7B
ZNF776
TSACC
THADA
STIL
RPIA
NME1
COX7A2L
CCT3
SMAD3
RABEP1
PXMP4
FBXO40
EIF4A2
COPS7A
VEZT
PARP8
LY9
GOT1
FGD6
DLGAP1
SLC39A3
RPL18A
RBSN
P4HB
NOTCH2
NOL6
C19orf67
ZNF420
TIPRL
SOD1
SLC9C1
PLEKHA8
PDE12
KNL1
ZNF143
UNC45B
TPD52L2
SETD1A
SART3
ISCU
FBXW11
ABHD16B
UCHL5
SUPT7L
SLC4A1AP
RPL26
RO60
PRDM10
GPR89A
TRAF7
RBM25
FBXO8
EMCN
CEP44
AFF3
ZNF335
SNX15
PMVK
KAT6A
ZSWIM4
WWOX
TRMT2A
TRAF3IP3
SUPV3L1
SMG6
RER1
RANBP1
RALGPS2
PRMT5
PIK3C2A
MORN1
BARHL1
ZNF226
STK17A
SNX1
LTN1
LARP4
HHLA2
FAM186A
CIAO2A
TXNRD1
RUVBL1
PITX3
KLHDC10
H4C8
GBF1
CACTIN
REEP6
PCSK4
EPS8
DNAJC24
DCDC1
CASP8AP2
BTN3A2
ATF7IP
NAV1
MRPL20
RFX5
MAP1LC3B2
BUB1
TMEM63C
RIC1
PHF1
OPA3
HUS1
EIF3F
SCRIB
NBPF15
LOC645177
EXOC4
CD69
C12orf77
RNF121
PSMD3
OAT
NOTCH1
LOC100133315
DYNC2I2
WDR24
STPG3
NELFB
CTDP1
CEACAM21
ATP5MC1
ZNF688
TRUB2
PEX2
LAX1
EXOSC6
ETV5
COQ4
CDK5RAP3
ATG5
ZNF235
TXNL4B
DHX38
ACTR2
TMEM259
SECISBP2
RPL15
NKIRAS1
MRPL21
MRPL1
METTL25
IGHMBP2
CNN2
CCDC59
UFC1
TIGIT
ZBTB45
DNAJC19
SCYL3
KDM4D
CWC15
PABPN1
THYN1
ACAD8
SRD5A1
NTMT1
NSUN2
C9orf50
ZNF443
RPGRIP1L
FTO
CCDC124
SULT2B1
RUBCN
PM20D1
NPIPB6
TMCO1
RGS1
NIP7
COG8
EXOSC5
BCKDHA