ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CDX2 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◣ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ CDX2: STRING

SNX12
KMT2A
ZFP64
WDR74
HOXB4
HOXB3
C20orf204
HOXA3
MAMDC2
C1orf100
CDK5RAP3
TSPAN3
RBBP8NL
USH1C
HOXC5
ZNF76
TRIM48
CREB3L1
CYP2R1
CXCL9
ART3
DUT
KRT8
HOXA5
AP1M1
CERK
HOXC6
OR9Q2
TMEM107
LOC102723996
ICOSLG
TFAP2A
HOXB8
INTS9
HMBOX1
LRRC19
HSPE1-MOB4
HSPE1
HSPD1
KCNE3
RHOH
QSOX1
DESI2
FCAMR
NFKBIZ
SLC30A10
LGALS3
ANKRD40CL
PMEPA1
GUCY2C
ZNRF3
FHL2
EPRS1
HKDC1
ZBTB45
HES1
SLC6A7
MALRD1
PRSS41
CD300LF
HOXC4
MEP1A
TRIM2
HNF4G
ZNF143
TOMM40L
ISX
APOA2
SPATA46
C1orf226
TBPL1
UGT1A1
CHI3L1
PDE6A
HK1
WBP4
ELF1
CDX1
FBXO31
NEK2
PIGR
AP2S1
RAB6D
SPAM1
HOXA4
RNASE6
RGS2
CDC14A
SPRED2
DEPP1
FLNB
FGFBP1
KIAA2012
SLC25A27
CYP39A1
RGMB
ABHD11
COL23A1
MAP3K14
GFOD2
RARB
CEACAM16
CD244
WWC1
STX16
NOS2
CDH17
ZNF608
WASHC1
KIAA1217
RNF114
QSER1
GBF1
TSPAN8
RPUSD4
FAM118B
UGT2B10
SMG7
FGB
C3orf52
SH3D19
CLRN3
C2orf88
MEIS1
MACC1
RAMP1
IQGAP2
VSX1
KRTAP3-1
GSDMB
ALG10
ZZEF1
CYB5D2
ARHGAP17
ZNF3
CELA3A
RIN2
EIF4G3
TBL1X
ZNF226
DUS4L-BCAP29
DUS4L
COG5
CASP4
HEPH
WDR77
ATP5PB
DUSP18
SIRT4
GEM
KIF16B
SULT2B1
PTPRF
LRIG3
SYBU
ABLIM1
DCUN1D2
CA4
YAP1
SLC17A4
SEMA3C
MAVS
ADGRE5
DNAJC25-GNG10
DNAJC25
SCT
CDHR5
ATF3
TES
GSN
ROCK2
MARCHF8
SLC20A1
PDE4D
RBM47
GSG1
ACOX2
SEC23A
ADD3
ERLIN2
USP7
ST6GALNAC4
RBM39
RBM25
DCP1A
LAMA3
INAVA
SLC12A2
MYO18B
MUC3A
MYRF
SLC7A6
NXPE2
TMPRSS4
LRRC66
TM4SF4
HESX1
APPL1
GGH
ZNF563
PIK3C2A
MATR3
ARHGAP45
GCNT4
CDK5RAP1
RNPEP
HNMT
MCTS1
GSTP1
CASP5
TUT1
MBNL2
AMACR
NTF3
ARHGEF12
PRR15L
ADGRF4
KRTAP4-2
KRTAP4-1
ANKRD27
LRRC59
SLCO2B1
DUX4
C3orf85
TMEM54
SOX30
REG1B
CTSK
C5orf52
RGPD2
NAPEPLD
CIDEC
NWD1
ABR
H4C12
TMEM45B
RNF145
REG4
MICAL2
NFAT5
MIDEAS
E4F1
SERPIND1
TFPT
PRPF31
PPARG
MAP1LC3B
KLHL30
LIMA1
TMEM87B
PAK1
MRPL44
ETFB
MTRNR2L8
AKR1C3
TMEM69
NNAT
IL33
GPBP1L1
BLCAP
TMEM141
RGPD6
ENGASE
PRSS3
IGFL4
TNFSF15
RNF186
CXCL2
TPD52
MGAM2
UBR2
PRKCZ
STAT3
SGK3
MAIP1
ACAN
TOB1
PLAAT2
HACD2
PMF1-BGLAP
PMF1
FABP1
TDRD1
CCDC186
TARDBP
ATP2B4
MIA3
ACVR1B
IGSF23
C19orf33
RAB14
MRPS23
ARHGAP27
RFLNA
SNTB1
PRICKLE1
ANO4
COX16
CALML4
NPIPB4
ARHGDIB
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GOLIM4
ZNF503
LDHAL6A
NXPE1
HNF4A
FAM107B
CTSB
PHF19
RNF43
TBX4
PKP2
CRYM
LOC388282
SF3B4
MTMR11
TNFSF11
KRT20
TTI2
KIFC3
CDK11B
CDK11A
MLF1
ZCCHC14
IFRD1
ARHGEF18
CCDC90B
HOXA9
HOXA7
ME3
JMY
INTS4
FOXN3
CLIC5
ZNF341
SGCB
PLEKHG1
H3C15
H3C14
H2AC19
H2AC18
GRAMD2B
COX20
RAD54B
FSBP
MTRNR2L1
RGPD1
KRT19
FAM53B
SLC45A4
LRRC31
SLC4A9
PPIL3
NIF3L1
AJUBA
ZFP62
LECT2
NT5DC4
REG3A
LDLRAD4
NOSTRIN
MGAT4A
BCL2L1
MRPL21
IGHMBP2
SLC12A3
PPP1R3D
NUF2
FAM217B
NGB
WWC2
IL34
NR0B2
SFR1
SPATA2
SLC3A1
PRAG1
GBA
NSFL1C
CNNM3
PES1
ZNF721
PIGG
TCF20
STX1A
SCAF11
PRDM4
MTCL1
CASC3
ZMPSTE24
PI3
CPLX2
BCAS1
ADAP1
KMT2D
PTPN6
NCOA5
CLDN4
C12orf57
ADNP
SLC12A7
METTL15
KIF18A
CYTIP
CLOCK
TXNRD1
RGPD8
RGPD5
UTS2R
MLPH
TRIM15
TRIM10
ZNF248
LASP1
NPIPB13
NPIPB12
PCK1
TATDN3
NSL1
INTS5
GNA14
NPIPB3
CEP126
ANGPTL5
SRI
POLR2J3
IRF2BP2
SORL1
ZNF91
RNF24
CELA3B
BTNL3
SLC33A1
UNC45B
MMACHC
METTL25
CCDC59
GGT1
CRLF3
OIP5
NUSAP1
MINDY3
FUT2
CMTM1
UTP3
UBB
AMOTL2
PPP1R3A
TBC1D30
TAPT1
ALG10B
NEBL
LMO7
CDC14B
FURIN
ZNF552
RTN4
TGIF1
TCN2
LRP2
HPGD
LENG9
FBN2
YWHAZ
NSRP1
SERP2
FARSB
TMEM60
PHTF2
HSP90B1
CCNJL
MS4A18
B4GALT6
DNMBP
MED13
CLGN
CACHD1
ANXA11
JMJD1C
SPINK1
EPHX2
PRPF19
GALNT1
FOXJ3
SMCHD1
RABEPK
FNBP4
LIPK
GALK1
CRYBG1
NR6A1
UCK1
PRKAB2
ZHX3
AKAP9
UEVLD
PTPRB
B3GNT6
MADD
SLC22A2
ZKSCAN1
ZSWIM5
USP6NL
CALM2
LRRC4
TOE1
TCF12
MUTYH
FGF1
ETFBKMT
ZNF501
ZCCHC8
CAMK2G
NRAS
ADARB1
CDCA8
C1orf109
BCL10
GPR171
PLA2G6
NAA60
KNL1
KLF5
YAE1
TAOK3
SMTN
TUBG2
PRDX6
LGALS4
CTTNBP2NL
BCL9
RIC8B
PTPRR
PIK3AP1
LUC7L3
CHKA
ADGRG1
GSDMA
ZNF510
BAHCC1
LNX1
EBAG9
CDX2
BARX2
HHLA2
HMOX1
GTPBP4
NPIPB5
KIF26B
DOCK6
SRP9
CACNB2
SPOP
RAB3C
TPCN1
TSHZ1
SHH
THAP1
OGFOD2
NHSL1
RDH11
TRIB1
SMC2
MARK2
ACCS
ID1
STARD3
PPP1R1B
BCAS4
SNX5
OSBPL1A
NDE1
MGME1
MARF1
DEPDC7
CGGBP1
C3orf38
NUAK2
STAT1
PRR5L
ZC3H10
RPL41
MYH4
EIF3D
GPATCH1
MBTPS2
GOLPH3
ELAPOR2
EIF3F
BRCA1
GLRA2
TUBAL3
CFAP69
BCAP29
PPFIBP2
NNMT
KLC1
IFIT1B
USP30
NPAS4
LRATD1
SLC11A2
WWC3
TMEM205
RAB3D
FGG
CCDC159
UGT1A8
FOXP1
TPX2
RP1L1
RASSF10
DSC2
ARHGEF38
OGT
STYXL2
RNF31
PSME2
GPA33
EMC9
BATF
HOXB5
FNIP2
FAM135A
PSMD3
DDX23
TDGF1
PRSS23
CEP120
RHOBTB2
NFE2L2
MAPRE3
OR9Q1
ADGB
WASHC3
TAPBPL
MOB4
C1QTNF1
VOPP1
DNPEP
CALB1
SYNE3
SLC14A2
PDCD6IP
NOS1AP
NFIX
KCTD5
UBXN1
FRA10AC1
TJP2
PPIL1
MMP10
MBIP
MAB21L4
C6orf89
RGS8
HAND1
CBFA2T2
UGT2B17
SMIM14
NDUFS7
LDHA
FBXO32
STK31
KAZN
TMEM114
CPS1
WEE2
DENND11
S100A2
PREPL
IBTK
CAMKMT
HEXIM2
PIK3CA
PHACTR4
KHSRP
CTXN3
TINAG
TEFM
SUSD1
SH3TC2
LPIN1
ELP3
VIL1
TM9SF3
TM2D2
SGO2
RAPGEFL1
MYO7B
ADAM9
ZNF282
SCNN1A
MUC20
LTBR
ARHGEF28
VIPAS39
NEURL1B
ASB2
AHSA1
TSPAN12
MELTF
ZBTB38
IQCF1
ARL14
URGCP
FAM114A1
EHF
ARID5B
SYTL2
MTUS1
VWA2
FCRLA
DAGLB
CFL1
SLC26A2
PIWIL1
BANP
TMEM171
NPSR1
DGKD
LRRC10B
COG3
TFDP2
PIH1D1
ECT2
CDCA7
ALDH16A1
UGT2B7
TTLL6
RAB5B
PYGB
TMEM170A
FRMD3
VILL
VANGL1
CYP3A4
XDH
TDP2
ACOT13
ZNF512B
SNX17
MRO
EIF2B4
MAP3K13
H4C11
CDR2
ZNF577
MYL6B
KIAA1549L
CLCN3
CAPN2
TACO1
RPS6KA1
ZGPAT
ARFRP1
ZNF384
CSNK1E
NR1D1
MRPS16
IGFL2
HOOK1
HEPHL1
COL5A2
ZNF770
GSTO1
DDX41
PHF8
H4C14
TSPAN32
SMG1
SLC25A45
SHF
FRMD8
COX19
C1orf105
C11orf21
OAF
ETHE1
ETFA
BCAR3
ZBTB7C
SDF4
CASD1
B3GALT6
SMIM31
DKK3
INSIG2
GJB4
SPRING1
RNFT2
PKIB
NOX1
AKTIP
TMEM126B
STPG1
NIPAL3
DLG2
S100A16
RASGRF2
EIF2AK2
DAGLA
ANTXR2
BUD13
ENKUR
TMC7
SH3BP4
HSBP1L1
AMHR2
AKR1E2
MAZ
ITGA2
VPS37D
KBTBD8
CORO1A
NEK3
HAL
TMEM89
GTF2H2
EMP1
CALR3
C19orf44
NCAPD2
MRPL51
PDXDC1
HINT1
ELF3
RPL38
NCOA4
FAM193B
CYTH3
UBAP2L
SYMPK
RHCG
FOXA3
DLL3
C1orf43
ACSF2
HOXB9
BTBD3
TRMT1
RTTN
PLXNC1
NACC1
B3GNT3
STAT6
RUBCNL
PHKG2
CBLB
ARIH1
TFIP11
MKRN2OS
MKRN2
CNBP
UBE2J1
TCIM
NR5A2
KRT6B
CFAP45
ANK3
TOB2
TEP1
MRPL53
ZC3H15
GTF2IRD1
SLC35B4
MINPP1
LAMB3
ERGIC1
PPARGC1A
DLX4
AGFG1
ZFAND6
SMUG1
TM7SF3
NEK7
YWHAB
RNF7
PKP4
CCDC148
C4orf36
SIT1
POLD4
FEM1A
CLSTN1
LEKR1
KCNQ1
IDH1
G3BP2
CAAP1
ZSWIM3
NOTCH2
HOXC8
ARMH3
ACOT8
TRMT61B
PMVK
PADI3
ICA1
TFEC
GOLGB1
CBLIF
ARHGAP32
ABCB11
TM9SF4
GSPT1
GDPD3
FABP2
RASSF8
MUC13
MTFP1
DYNLT3
WDR36
STX18
HOXA6
SELENOP
OR10H1
CHPT1
RIPK4
OPRL1
LKAAEAR1
APBB2
AMN1
USP54
SLC17A9
AGR2
TMEM230
NXPH2
MTHFD1L
TOP3B
SUPT7L
SLC4A1AP
CYP4X1
CLIP2
TET3
CGREF1
PDE5A
KLRC2
GALNT5
F2RL1
TYMSOS
TYMS
THAP10
SLC38A1
SLAMF8
PDE4A
LRRC49
CPA6
CCNL1
ATP5MPL
TMEM248
SKIL
MT1B
MRPS15
CCAR2
TNRC18
ITGB4
FBXO48
CLIC4
CHD2
APLF
ADGRL1
WDFY1
SPO11
NOTCH1
MBNL1
RAPGEF6
GRK2
ATL2
ANKRD17
ZNF438
SLC7A5
KRCC1
CCNI
USPL1