ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852813 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◣ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NRARP
SRP68
LFNG
ARID2
GABPB2
RIIAD1
CELF3
PLPP2
NTN5
CCPG1
C15orf65
PTMA
NAV2
TES
C2CD4D
PIPOX
NOTCH1
PYM1
DGKA
ZMAT4
SMCO1
LRP12
FAM227A
CBY1
MTF2
WFDC8
GGH
ZNF335
LRRTM2
CTNNA1
ADAM28
ARPIN-AP3S2
ARPIN
GRK6
PXYLP1
CLUAP1
CDX2
TSKU
SH3BP4
HDAC4
CDH18
VWCE
IL21
NFIB
KIAA0040
MATR3
ANKRD6
TMCC1
HGS
ARL16
ECT2
SNAPC3
ZSCAN2
PRR15
PER2
IFRD1
VWA2
TARS3
ZBTB45
DCSTAMP
LOXL3
DOK1
ID2
PLEKHG1
SYBU
PLCH1
NDUFB5
MRPL47
TASP1
LMCD1
ZNF775
LPP
CDK5R1
MED25
FUZ
ZNF750
HMGB1
MUC1
CCT2
HES1
ODF4
HMGN1
GSN
CLDN14
YEATS2
ESRRA
CATSPERZ
MYEOV
EPHB3
SINHCAF
KIAA2012
EPHX3
SAPCD2
RNF217
KCNN2
EPYC
LRIG1
STK31
HES5
PANK4
SRGAP1
GSTP1
KDM2A
VASH2
C1QTNF7
SEPTIN9
LTK
CCL26
ALDH1A1
SIX2
ESYT3
ETV3
MARCKS
SLC20A2
SLCO5A1
IQCH
AAGAB
GEMIN4
SLC12A7
BCL9
SH3GL3
CRYGD
CRYGC
SNX27
KMT2B
CEMIP
BMPR2
ZDHHC3
EXOSC7
AUH
TMEM41B
DPYSL3
TLR4
CLEC4F
ERMN
SACS
UPF1
CYP1A1
H4C14
H4C15
LTBP1
TGIF1
RAB23
HDAC9
TIA1
NEBL
KLF7
RORC
KRT8
TMPRSS7
SYNCRIP
LOC100506422
YWHAQ
PTGR1
FBXL19
AKIRIN2
MUS81
CFL1
LYPLAL1
TJP2
DNAJB1
HSF2
SPRY4
POLB
SYNE2
LY6G6D
KIF21B
TRMT12
DHX8
ARIH1
STAU2
MACROH2A1
SOX2
PTP4A3
CEP85L
SLC25A36
ST7
SLC9C1
CYTH2
MSANTD4
VEZT
FGD6
HAO2
CHN2
CPVL
ZSCAN10
METTL11B
DDX17
SDHC
TMEM132A
HOXA9
ESRP1
ST6GAL1
CALHM4
CBX1
POGZ
ZDHHC5
HNRNPLL
EHD4
WIPI1
OAZ2
LRATD2
TLE3
CD46
ST3GAL4
STAG3
GPC2
TMPRSS4
GTF3C3
ABL2
PRSS23
HAUS6
PHF5A
ACO2
DOCK9
CRISPLD1
GBX2
PDIA4
SPDYE14
SPDYE10P
FOXJ3
MAT1A
CSRNP2
HNRNPDL
ENOPH1
TMUB2
SLC16A13
RNF20
MKRN3
HTR1A
PMEPA1
PPIA
ONECUT2
SMARCA2
NADK
ZNF687
FGF19
HES6
ABHD11
ELAPOR1
C1orf194
POLI
BAHCC1
TBL1XR1
PXDC1
UBE2G1
MOBP
NIBAN2
SRRM4
BCL2L11
CPSF4L
PPDPF
SOX14
CLEC9A
ZFC3H1
THAP2
ALDH1B1
DAGLB
MTDH
JUP
ETV1
TRAK2
STRADB
TNFAIP2
LAMC1
RAB30
ANKHD1-EIF4EBP3
ANKHD1
ATXN1
CTTNBP2NL
CPA5
NARF
TRIB1
SC5D
ZBTB8OS
RBBP4
APOBEC3F
KLHL24
BORCS6
HSD3B1
FGD3
ZNF304
NUP160
SLC33A1
TIAL1
TRPC3
EYA1
SHF
MGST3
LMO3
ZNF358
H3C8
H2BC10
ARID5A
CPT1A
S100A2
SF3A2
PLEKHJ1
LIMK2
APOD
KCNE3
CLCN3
ZBP1
TMEM17
DISC1
TMEM205
CCDC159
RAB3D
ANKRD44
MBLAC1
RBM20
ID3
MTA2
ALDH3A1
ZNF608
ZNF428
SYTL2
GADD45A
LPAR6
CLIC5
DDX58
TNRC18
LOC100129484
UBQLN4
LAMTOR2
GPSM3
RIMBP2
CELF2
HEBP2
GDF5
CEP250
UBE2T
DDX43
MEX3D
MCM7
AP4M1
TANC1
GPR1
FAM120B
DLL1
PTHLH
PSMG4
VGF
FNBP1L
GRIK3
NRCAM
HIP1R
ITGB4
CLRN3
SH2B2
ANP32E
TBC1D16
FMNL3
MSRB3
OPN3
CHML
CHD6
MANSC1
IGF1
MCCC1
SPHK1
PIF1
DMRTA2
CDC42EP3
EPB41L4B
TMEM68
TGS1
PGK1
CELSR3
SLC2A4
LPCAT4
NCOA4
MTA3
KCNG3
TSPAN13
UGT1A5
MNT
HMOX1
CLK3
ROPN1B
GRAMD2A
MDM4
MRO
GADD45G
FMN1
FTH1
SH3PXD2B
PTPRO
PDIK1L
NHSL1
LOC389199
AFAP1
MEGF9
SAXO1
RRAGA
FGFRL1
MFSD6
WDFY2
ZSCAN9
TPD52L1
ZNF277
DOCK4
SH3PXD2A
ERV3-1-ZNF117
ERV3-1
LGR6
CA8
SEC16B
GTF2IRD1
DLX5
SNTB1
ZNF184
MAEA
CRYGB
ANAPC15
CNP
STK32C
LRRC27
INSM1
ETV6
PARVG
USP6NL
SCN1A
UNK
H3-3B
SYNE3
ZNF273
EIF3E
CEMIP2
THEM4
BAZ2A
CDR2
PAN2
IL23A
HACL1
BTD
ZBTB6
ZNF180
OR4N4
GABRR2
TUBB
MDC1
H3C6
SELE
CALN1
GIMAP5
SRSF7
PCDHB8
PCDHB16
TLX3
H2AZ2
ZSCAN31
THEMIS
MAP4K4
LYPD6B
ZCCHC12
LDB1
ZFYVE21
XRCC3
ZNF718
ZNF595
KLF6
TTC23L
CCDC33
TRIM13
RFX5
YPEL1
OR4C6
SYT2
EMSY
TOMM40
FOXO6
KNTC1
GPX6
TDGF1
GLI2
MIDEAS
PTX3
BTG1
VAV3
TUFT1
TUT7
ZNRF3
RNF157
C20orf96
BAZ1B
TLN2
ANXA2
SCRT1
ZC3H7A
TPRG1
ADAMTS19
PROSER2
NKIRAS1
RPL15
USP22
ZNF195
DPP3
NEFH
ID1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CITED2
SDHD
MAFG
ADRM1
BBS7
ZNF106
SNAP23
CCDC88A
ZBTB38
CEP68
ACTB
PSMB7
BRINP2
MIDN
FAM136A
RNF38
LIMCH1
SPATA12
PRUNE2
ZNF250
CIART
MGAT5B
LZTS1
HSBP1L1
FAM72C
FAM72D
RRBP1
ARHGEF38
ZFP62
PLEKHG4B
ZNF107
FOXD1
VOPP1
PWWP2A
TCF4
LNX1
NFE2
RBP1
CDK5RAP2
POLR2M
RAB11B
HNRNPAB
MAST4
TAX1BP3
EMC6
PPFIBP2
FIGLA
NTMT1
WIPF1
SLC1A3
RNF145
ELK3
SASH1
KCNA6
PRKX
SLC9A2
STAT3
LMO4
PDP1
HSPA13
DUSP7
TMEM211
BMERB1
NAXD
OARD1
NFYA
EIF4A2
NAP1L4
DIO2
PNRC1
GREB1
FAM76B
CEP57
HECTD4
LMO2
SEMA6C
EPHX1
HDDC2
TRMT2A
RANBP1
PPME1
C2CD3
MRPS2
C9orf116
TAF1A
POC1A
SLC25A11
RNF167
TLE1
RFLNA
EXPH5
AGO1
ZSWIM4
CDCP2
GPER1
PLS1
DST
FAM91A1
ARMC3
NELFCD
TOMM40L
APOA2
EID1
SACM1L
STMN1
FILIP1L
SDE2
CCNJ
PON2
RERE
POFUT1
PLAGL2
DNMBP
GOLGB1
NDUFS5
OSBPL1A
LINGO4
PLXNB2
H2AJ
PARP1
CASTOR2
HOXC8
ZBTB2
CDIN1
ZCCHC14
VCAM1
PELATON
WDR36
KANSL1L
CSRNP3
ZNF92
SLC35E2B
BAG3
DMRT3
GET3
TESK2
SLC7A11
PPP1R14D
EGR3
ZBED5
TXNDC16
YWHAG
ZFP69B
FAM83A
CAPRIN1
RAI14
BARHL2
AMELX
ACSS3
CTSV
LGALS9
SFPQ
EXOC5
AP5M1
SCNM1
LYSMD1
RPUSD4
FAM118B
C6orf132
ZNF736
CRYAB
HSPB2
C11orf52
MSX2
CTDSP1
MALT1
NAGPA
MRPS30
ZNF630
RNF115
POLR3C
CACHD1
RAB36
RSPH14
GOLIM4
CD2BP2
CTH
WASHC3
VANGL2
DGKD
PELI1
GPR137
HOXD3
HES2
ESPN
S100A16
TMX2
MED19
PAIP2
R3HCC1
KCNMA1
RBFOX2
MAP2
HEXIM2
TMEFF1
TCIM
SLC39A8
SDCCAG8
CEP170
CNKSR3
ZCCHC8
POU2F1
C15orf40
AGTPBP1
LRRC8A
KYAT1
ETS2
SLC9A8
AMN1
ACSL6
MID1
SUFU
ACTR1A
JMJD7-PLA2G4B
JMJD7
PTK2
KRT15
NFX1
MUC15
VEPH1
MOSPD3
SHROOM3
HK2
CBX2
FZD2
GP5
COPS7A
KMT5A
OR5AP2
STK4
ETV4
GXYLT2
GOLGA6B
ZSCAN16
ZNF506
ZNF720
PACSIN3
CAST
GDPD1
ISL2
GOLPH3L
STC2
PKMYT1
KRTAP3-1
NASP
C6orf118
GRB10
PPP1CB
ZFHX3
CDC7
PHF3
PHLPP1
ADAR
CUEDC1
CNOT11
IP6K2
MAT2A
NAA40
TMEM44
CHRNA1
WBP11
C12orf60
SRPRA
PIWIL1
CSRP3
ECE1
SCAF4
DYRK1B
PEX11G
MICAL3
AGPAT3
DIPK1A
RIN2
NOTUM
FGFBP1
ERGIC2
PIMREG
DIABLO
VPS50
HEPACAM2
EGFLAM
NNT
DUSP12
RTBDN
MAST1
CHD1L
PRKAB2
HILPDA
PPFIBP1
SERTAD4
DDX5
CEP95
PTPRK
ARNT
QSOX2
LPIN1
RGS7BP
SNAI2
MT1X
PHC2
DDX3X
FBRS
EXOC6
SUMO2
NPDC1
GPR15
NACAD
SCAF11
SLC12A9
EPHB4
ZNF680
HOXA7
RTN4
CXADR
HSPH1
PCDHB13
AP3M2
PLXNB1
PEBP1
DIPK2A
RPS6KA2
PHF12
CACYBP
SLC30A8
GSX1
VPS37B
PRKRIP1
ACTR2
IGSF9
ESPNL
CLDN20
SESN2
NR4A1
MAPKAPK3
CISH
RABGAP1L
KIAA1671
LUC7L
CCDC88C
FZD1
VRK2
ICE1
CHMP4B
CYTH1
CYP17A1
SKIL
DGUOK
GAD2
AKAP9
KIAA0895L
ZFAND3
ITGB1
TRIM38
USPL1
EIF4A1
S100A5
S100A4
S100A3
PRKDC
MCM4
HOXB4
HOXB3
CTSK
ITPRIP
YLPM1
CD300LB
PRR19
PAFAH1B3
MKRN2OS
ARHGEF18
PRRC2B
EXOSC2
STON1-GTF2A1L
STON1
SPO11
ASNS
MMD
THSD4
MAMDC2
KDM3A
AKR1C2
ICOS
RGL1
PDE6A
ERBB4
PDCD6
ANO6
NRSN1
ACLY
PI4KB
HOMER2
IFT80
RCOR2
SMC4
PGM2L1
ZNF124
ILVBL
COX8A
NEK2
RAB5C
KLF12
PTP4A1
PRDM1
ZBTB7C
SUSD2
FAM181B
RGS3
KRT23
DLX1
RAB2A
TNFSF9
SOCS3
ETV5
SUN1
H1-7
ADAM10
FAM166C
OTOF
IL7R
TNIP1
ST8SIA1
MYL12A
FGF18
LLGL1
ZMAT2
ARF4
RSF1
AAMDC
ZBTB26
USP30
EFHC1
NUP93
SCD
SVOP
FDXR
USP25
CHD2
FERMT1
CHST12
LEF1
C7
PRSS56
WIPI2
PRB4
NUFIP2
ADD2
DMWD
OGA
CCNG2
HID1
LRATD1
TFAP2A
DNM1L
BMF
RPA2
ZNF268
SPIN1
ZNF524
FIZ1
ZBTB10
YES1
DUSP6
GNA12
KDM5B
CEP295NL
RNF152
SIRT1
CACNB3
KPNA4
GNB1
GATA3
TPM1
BACH2
HSD17B12
TWIST2
ATOH8
PCBP1
MMACHC
SMARCAD1
HBP1
DNAH1
ZNF292
RAPGEF2
PDE7A
METTL9
TPK1
MLLT6
RXRG
FAM114A1
PIM1
ZZEF1
CYB5D2
HES3
ICMT
SOX5
CDC14B
AASDH