ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771668 | N2102Ep
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◣ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

SMARCA2
MTHFD1L
ZNF483
NRG1
CD99L2
REST
LRRN1
OTX2
TMPRSS11E
SPATA45
ZSCAN2
BTG2
ECE1
MOBP
FLAD1
SAMHD1
SFRP2
SLA2
SOX6
TCF7L1
APOBEC3F
OR5AR1
RMND5B
TIMP4
ID3
FAM222B
DPPA5
ZNF343
FGF1
SNRPN
SHISA5
ARHGEF38
CACHD1
ZSWIM3
ACOT8
METTL11B
SHCBP1L
TRAPPC8
CRYGB
CELF4
DNMT3B
EDDM3B
DCAF4L1
ZNF398
HOXD13
HOXD12
GDF11
NES
PEAK1
HMG20A
IFT80
IL34
ACOXL
VENTX
PHC1
RCN1
MED12
FBP1
PARP1
GDF3
PIPOX
WFDC8
GAD2
HESX1
RASGRF2
SLTM
CAPN3
BCOR
LMCD1
TDGF1
MRPL20
DUSP6
TRIM2
SACS
NTRK2
GIMAP5
ANKRD1
NCDN
KIAA0319L
LIN28B
LEFTY2
PUF60
CDX2
FBXW11
FAM20A
ZNF608
PRICKLE1
LHFPL4
FZR1
MYSM1
CDYL
DND1
SMAGP
RPH3A
AMN1
VCAN
SEC14L5
PSMD9
HPD
SYT2
C22orf39
SNURF
MAGEB2
ZNF875
TALDO1
KRT6B
SLC23A2
MFSD4B
GLDC
TMEM43
CHCHD4
ETV1
SLC35A5
ATG3
GOLGA6D
FGD4
ABCB5
NDUFV1
ESRP1
MTRNR2L8
CLDN9
SYN3
EXT1
ZFHX3
L1TD1
TRIM24
FZD8
ISOC2
MAD2L2
DRAXIN
PYGB
PNRC1
HBG2
TRIML2
AK4
TRIT1
FXYD5
TET3
ZNF296
GEMIN7
FBXO40
UGT1A6
CNGA1
NIPAL1
NPSR1
CDC42EP4
USP44
SELPLG
GSN
LIN28A
NATD1
FRAT2
ITGB3
DOK7
PRDM14
C10orf95
JPT1
PCDHB8
PCDHB16
FZD2
PCDHGC5
PCDHGC4
TRPC4AP
PDGFA
RAD18
PITPNM2
MRPL18
LEKR1
SLAMF1
NEPRO
ALDH1A2
AGO1
NECTIN1
STX16
ZNF552
ASIP
DNMBP
FGFR2
ALDH2
SNX16
RASA1
RESF1
DPPA4
REV3L
ESX1
SMPDL3B
TRPM1
UTF1
WDHD1
SOCS4
PSIP1
NDUFAB1
GOLGA6A
MTM1
TRIP4
PCLAF
BIRC6
PREX2
ZNF318
ASH2L
CDC14B
SNX19
IGBP1
NFE2L3
EPHA4
MDN1
INO80D
TMEM167B
PTAR1
TMEM47
TCHP
LONRF3
PRODH
LOC102724788
FGD3
ZNF565
MOG
PCBP1
ZNF436
LIPK
TNFSF8
NDST1
PAK1
NACAD
NRG2
SENP2
SEC22B
TBC1D16
NAV2
SALL3
APOBEC3G
YIPF4
IER5L
SRCIN1
DIDO1
RHBDD2
RNF186
GPRC5B
ANKRD40
OBI1
CSF2RB
PPP1R16B
PCDHB13
GIGYF1
GOLGA6B
ACCS
KCNMB2
SOX14
HDAC9
GOLGA6C
PTPRN
FGF4
LYPD6B
SPIC
GXYLT2
OLFML3
AEBP2
UHRF1BP1L
UNC13B
GABBR1
SLC25A16
PLEKHA5
DDX39A
GTF2I
SP7
KCNIP4
WDR44
PPP2R3A
KRBA2
MACROH2A1
FIGNL2
BCAT1
MEIS2
YAF2
PALM2AKAP2
KRT8
DET1
CMAS
CNR2
USP7
LRRC47
ITGB5
PGPEP1
MBOAT2
MAP6
BEND3
DLST
SLC38A9
PSMG3
KIAA1522
B3GALT5
ANP32A
MBNL3
SAMD5
ZNF90
HES3
ICMT
LRRTM4
HECW1
NADK
LRAT
DDX43
PRUNE2
CSHL1
ZNF335
MRS2
METTL7A
CHFR
TMC5
RMND1
ARMT1
NKX1-2
MCCC1
CCDC169-SOHLH2
CCDC169
AIRE
ZNF814
CAAP1
SYNPO2
ZNF781
JARID2
PDCL
SGMS1
CCDC130
SPHK1
ZFYVE1
H3C15
H3C14
H2AC19
H2AC18
FGF6
REXO4
ADAMTS13
ABCC2
PDE1B
AADACL3
KLHL4
IFIT3
MUC1
PPBP
PF4
AUH
GSPT2
GJA1
CDC42EP3
PRR15
LINGO1
RAX
CSGALNACT1
DHX32
ZFP3
KCNJ1
KRTAP5-9
AQP2
TMEM9B
HELLS
LYPD1
GYG1
TIAM1
SLC20A2
KLF17
LHCGR
TSPAN18
SLFN12
DENR
UPF1
LOC102723623
GOLGA6L22
GOLGA6L1
RAPGEF5
SESTD1
CCDC33
COPZ1
MTF2
ADAR
SOCS3
KDM2B
F11
GADD45G
MVB12A
GABRQ
PCDH1
NFKB2
CCL2
STAC3
PCGF6
MMACHC
OR6C3
FAM24B
LRRC74A
DUSP12
CFAP410
SCGB3A2
MGAT4C
SASH1
IL21
AP2B1
CDC25A
SCAF4
FAM180A
RIF1
GAST
WDR49
PLAGL1
DNAJB1
SGMS2
SOX2
HHIP
OCSTAMP
AASS
NEUROG3
SLC46A1
RNASE9
ZNF664-RFLNA
ZNF664
CCDC92
SOX15
SLC7A5
ABL2
TRIM16L
SALL4
SYTL2
PLPP3
ZNF438
SDHC
MT1E
ETV4
EPB41L4B
IQCF2
LHFPL5
CLPS
SLC39A8
MINAR1
CCDC167
KCNN2
TBC1D1
ZNF649
ATP6V1G1
GABRB3
GRAMD2B
PBDC1
SERINC3
HSBP1L1
CFLAR
LRGUK
RNASE10
ZNF536
ETNK2
SOAT1
CDH26
KAT8
TINAGL1
ZC3H12B
TLL2
ARSL
ELOVL6
KLHL5
SLN
PDPN
POU5F1
NANOG
PRRC2B
CEP135
FAM126A
SLC35F6
CCNT1
DNAJC7
CCDC85A
NKIRAS2
GCSAM
PPP1R18
NRM
AGL
SOX5
DHRS3
SRSF4
ZNF624
CDH4
PRMT2
PXDC1
ZMAT2
IL22RA2
SMAD3
RAB25
ARHGAP36
GPC4
SHF
ZNF600
RAB40AL
CCDC172
TP53
MAD1L1
RAD54L2
GPR149
ZNF202
FHL1
NAXD
ERVH48-1
C1R
VSIG10
PMEPA1
CER1
CCL26
FZD5
PRKAA1
MS4A12
SRRM4
C19orf25
TRPM3
SULT6B1
PRR14L
TBC1D23
TUT4
SLC13A2
FAM200B
GATA3
HOXB1
GJA10
MRPS25
HYOU1
CECR2
THOC2
THBS2
ATP5F1E
HLA-F
SMIM14
RTN4
DCLK1
VOPP1
KRTAP3-1
SVOPL
NUP205
ETS1
EPHB3
SPATA22
PROM1
MSH6
IGSF1
PNLDC1
PADI4
DCXR
SLC35E4
RASAL2
LEFTY1
SLC2A11
SERPINB6
DERA
IFRD1
ACSL1
RPS10-NUDT3
RPS10
EPB41L1
RPSA
PIN4
DEFB107B
DEFB107A
NEB
EFCAB8
SURF6
SPP1
ELAC2
LOC150051
EEA1
GALNT8
ZIC5
CAVIN3
HCAR2
ZSCAN12
OR2S2
ZNF532
ANK2
MSX2
SUCLA2
BCKDK
BIN2
TMEM68
TGS1
RGSL1
KMT2B
LAPTM5
POLR1F
SMIM11B
SMIM11A
TNRC6A
TFAP2C
SUB1
RIMBP2
CHD1L
MOV10
TAF13
CLEC7A
GPR160
MRGPRX3
CACNA2D1
PAN2
IL23A
CDH10
MECOM
PRSS41
DPH6
LRRC4C
TMEM220
SPAG9
LPCAT4
IHH
RPL8
ZNF517
ITPK1
GPR179
PCDHGB2
PCDHGA5
GGTLC2
TMEM229B
IRF6
KIF19
FAM83F
TRIM34
ZMIZ2
TRIB2
ZNF200
S100A13
LANCL3
SIGLEC11
DPYSL3
INSM1
CHD7
UBAP2
CXCR1
NCOA7
ABCC10
CHCHD3
EMD
CYP2S1
SLC10A2
KLF5
MAP2K5
TRIM64B
SORBS2
CCN2
RIPK4
FAM153B
ZNF729
TIAM2
SPRY4
JAG1
GLIPR2
STMN1
CD9
FAM189A2
PPP1R8
OR6J1
DTX2
ZCCHC3
TKT
BFAR
TTLL6
PHF19
KLF6
OAT
SUCO
DRD1
WBP1L
GLI2
PTPN12
ST18
NCALD
ADCK1
TOX3
LMAN2L
RPS14
SLC25A35
RANGRF
ADA2
SLC2A10
RIPOR3
TACC2
ACSBG2
PLAC8
SFT2D3
TSGA10IP
SLC2A14
TMEM266
MSL2
PPP1R17
ABHD11
TMEM87A
GANC
USP48
EIF4EBP2
MANSC1
EZH1
WNT5B
PCSK1
RPE65
POSTN
ARHGAP19
GLRB
SPEN
PPP1R3B
FBLN1
IL20
OR1E3
TPCN2
DYDC2
DYDC1
SYNDIG1L
NRCAM
CSDE1
MYF5
MPI
TMCC1
REX1BD
EEPD1
ZDHHC1
CNOT11
PLAAT3
OVCH1
TNFSF4
ZYG11A
VMO1
GLTPD2
PPP5C
HOXA11
LBP
GCLC
ITIH1
DTD1
ARID5A
SPRY2
MAGEB17
PMS2
AIMP2
SLC22A23
C16orf78
AHCYL2
PCDHB5
OLAH
DACT3
GPC6
HOXB2
GCNT2
HSD17B14
FOXP1
DCLRE1C
ITM2B
GRM4
TNP1
EGFR
SPATA12
CLCC1
ADGRA1
KRT82
PGAP6
NEBL
TAGLN3
SELENOT
IQSEC2
CAPN10
MARCHF2
PFKP
COLEC11
FRS2
TFE3
KLRC1
GINS3
RNF213
RAP1A
RPUSD3
RGS3
SLCO4C1
DGLUCY
ZBTB2
PSEN2
DUSP16
RAB42
RBFOX2
TRIM5
TRIM22
SP9
LILRA3
ZSCAN10
AASDH
PIK3C2A
ANO10
ABHD5
RTP3
NIT2
MTA2
GUCA1A
RNF19A
MTHFD1
RORC
CMTM4
PLEKHA7
OR1A1
ITPRIP
LGR6
C1orf167
OAZ3
MUC3A
MED4
CASP2
TMEM139
CA8
SP4
KRT18
KLF3
UPRT
LRRC59
TBCA
PITX2
NFIX
MYOM1
ERICH3
SLC36A1
ETV6
TRIM54
BRINP1
HLCS
DNTT
ANKRD66
HGC6.3
LIFR
LRRTM3
PLIN2
MRPS15
SCGB1D1
SLC3A2
RNF24
USP50
PGBD5
SPTLC2
CNBP
TTC39B
ZNF25
GPAA1
EXOSC4
RAB19
SLC37A3
CMC2
SCD5
NGRN
FGFR4
ZNF391
RBM20
SH2D4B
THY1
AJAP1
SYBU
COX8C
SPATA4
BBC3
S100A16
ZCCHC12
STOM
DIRAS3
DST
PPARGC1B
STOX2
NSD1
OR8B3
IPMK
CISD1
NLGN1
INPP5F
NODAL
TMEM53
ARMH1
UTS2
PER2
COL23A1
HLTF
ATG9B
ABCB8
PPP2R2C
TSPAN14
ZNF260
RFX4
TJP2
MIDEAS
RND1
HEY2
KDM4A
SP5
TMC1
NSMAF
TMEM41B
RIMKLB
CCR8
RIIAD1
OLIG3
PPARG
DUX4
SKIDA1
MLLT10
ADAM18
RASSF8
PHC2
TEAD4
MAEL
ILDR2
SUPT4H1
SRSF7
VSNL1
DIAPH1
HMGCL
RAB7A
VPS37B
APOBEC3D
APOBEC3C
ARSG
MFSD6
TFPI
CLCF1
GFRA4
PLD5
SLC16A8
SBSN
GAPDHS
ADGRF2
DHDDS
SLC24A1
PLA2G4D
H3-2
TGIF2-RAB5IF
TGIF2
RPL23A
RAB34
HROB
EMSY
GP5
SET
GTF3C4
DDX31
BARX1
LBH
GLUL
ZNF584
ISL1
GREB1
PLD2
IGFBPL1
SLC16A12
KCNA1
FOXD1
PBLD
HNRNPH3
MB21D2
THEM4
SLC5A5
FOXC1
ARID2
AIFM1
LRP5L
RPL32
PRSS8
HADH
RNF43
FRMD3
KRT77
UBASH3B
CCDC141
HAUS6
MFF
ATR
FOXE1
NMNAT3
CTNNA3
GGTLC1
GPSM3
CAMTA1
TRIM39
PNISR
IFITM3
IFITM1
TEX49
DES
NBPF9
CTBP2
RBPJ
TBC1D9
TTLL7
SLC9A4
SLC6A12
ID1
KMT5C
FUBP1
DNAJB4
FZD10
YBEY
MCM3AP
CCT2
ARAP3
FMN1
MDK
SYT16
RNF17
TRAF2
NHEJ1
ATP9B