ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277131 | KYSE-70
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◣ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NDUFB5
MRPL47
NRARP
SMCO1
MUC3A
COL23A1
TRIM48
WDR74
NOTCH1
DNMBP
FAM227A
CBY1
OR13C2
MAMDC2
TSKS
AP2A1
IFRD1
ZSCAN2
TNRC18
LOC100129484
DUX4
MED25
FUZ
CYP1A1
PXMP4
EFHC1
CYTH2
ARIH1
IQCH
AAGAB
SNAPC3
LMCD1
MTF2
HDAC9
POLB
NRCAM
RFLNA
ISL2
PTMA
YEATS2
PIK3C2A
PLA2G6
LFNG
SAXO1
RRAGA
PDIA4
UFD1
CDC45
HMGB1
MSANTD4
CYP4F11
DDX17
HMOX1
YLPM1
UBTD2
OAZ2
SH3GL3
PHACTR2
CPT1A
FOXP1
VWCE
RSF1
AAMDC
KLHL24
ABCC1
TXNRD1
CDC42EP3
CAPRIN1
HMGN1
ZNF775
KDM2A
CSRNP2
FMNL3
RIIAD1
CELF3
TCIM
FLG
ABLIM1
NKIRAS1
NR1D2
RNF187
RNF20
PIK3CA
STK31
GRK6
CCT2
TES
CHD6
ACSL6
MATR3
EXOC6
OGA
TSNAXIP1
RANBP10
KRT8
COL9A2
PRDM2
GSTO2
CEP41
KLHL5
ST6GAL1
ZFC3H1
THAP2
ZNF608
TESK2
ANXA11
ARID2
PHF5A
ACO2
DENND4A
SLC16A13
ELOVL5
MCCC1
PGK1
AKR1C2
SHC3
MUS81
CFL1
RTBDN
MAST1
CAPNS2
SLC25A36
PIPOX
FZD1
C1QTNF7
TBC1D17
AKT1S1
ZFX
NUP160
LYPLAL1
FBXL19
TMEM88B
ANKRD65
ESRRA
CATSPERZ
ANAPC15
YDJC
CCDC116
PRSS23
DDX3X
PIK3R3
FZD2
DST
SPRY4
ATAT1
ZBTB6
MMP10
TIAL1
RBBP9
NFE2L2
SLC35E2A
HGS
ARL16
ADH7
OTUD5
YES1
PYCR2
FEM1A
HACL1
BTD
SOX6
C11orf58
ENOSF1
ETV1
EXOC5
AP5M1
FOXO6
EP300
SYNCRIP
HSPH1
NAV2
SACS
SMARCA2
NES
MTRNR2L8
CDX2
METTL11B
SOX2
LRRN1
MUC1
REST
AGO1
OTX2
CACHD1
ARHGEF38
ID3
SOCS3
WFDC8
DNMT3B
FGF1
TMPRSS11E
OR5AR1
ZFHX3
PPBP
PF4
NRG1
FIGNL2
DUSP6
MTHFD1L
RMND5B
SPATA45
RPH3A
NTRK2
GDF11
DPPA5
BCOR
SFRP2
ZNF483
ANKRD1
CD99L2
TCF7L1
SLTM
SNRPN
MOBP
BTG2
FGD4
USP44
ADAM28
GSN
TALDO1
PPP1R16B
SHCBP1L
ABHD11
EDDM3B
FLAD1
FGD3
HES3
PLPP2
FAM222B
MTRNR2L1
ETV4
ICMT
PHC1
GIMAP5
SAMHD1
GXYLT2
MTRNR2L2
MSH3
DHFR
PDPN
RCN1
GADD45G
PRICKLE1
OBI1
TMCC1
ITPRIP
DHX32
SRRM4
SNX16
HESX1
GAD2
GOLGA6D
FGFR2
GPSM3
VCAN
SLC7A5
TMEM47
BFSP1
PARP1
PREX2
NFE2L3
SAMD5
LIN28B
SNURF
LZTS1
ZNF398
POSTN
TDGF1
NADK
PALM2AKAP2
FBP1
GPRC5B
TRIM24
LRRTM3
CLDN9
MFSD4B
ECE1
RFX4
FBXW11
FZR1
AMN1
MTM1
PER2
PSMD9
HPD
CAMTA1
PGPEP1
MRPL20
PLAGL1
FAM120B
ZSWIM3
ACOT8
TIMP4
KMT2B
TBC1D16
SCGB3A2
SYT2
SHISA5
CHN2
PMEPA1
DDR1
ESRP1
SORBS2
TRIM2
TNC
NCDN
KIAA0319L
WDR49
GOLGA6A
DCAF4L1
TRAPPC8
RGS3
LIMCH1
RASGRF2
GJA1
TMEM41B
KCNJ1
PSIP1
SOX14
ST18
MAD2L2
DRAXIN
TTYH1
HBG2
FRAT2
C1orf127
POU5F1
GPC4
IER5L
SOX5
SELPLG
PLEKHG1
FBXO40
IFT80
ZNF343
SASH1
GET3
ZSCAN10
DOK7
OSBPL1A
FZD8
MED12
GOLGA6B
OR2T1
NDUFS5
CYP2S1
SCAF4
NDST1
HHIP
BEND3
RASAL2
DGLUCY
APOBEC3F
KIFBP
FGF2
CTNND2
SHF
KCNN2
RASA1
MYCL
ONECUT2
GDF3
TPST2
FAM180A
RBFOX2
CELF4
ZNF335
HOXD13
HOXD12
GOLGA6C
PNRC1
NANOG
MDN1
ETS1
PDCL
ACVR1
SLC35A5
ATG3
UTF1
SH3BP4
CCDC200
DICER1
TRIB2
SLC20A2
PEAK1
HMG20A
ALDH7A1
WNT5B
B3GALT5
BCL9
TOX3
CRYGB
RTN4
OLFML3
PRR15
LINGO1
CDC14B
PLEKHB1
SPHK1
DAGLB
HES1
ZNF436
MYSM1
TUBB
MDC1
SRSF7
IL34
EXT1
REV3L
SLC39A8
UNC13B
PCBP1
TOMM40
PYGB
LEFTY2
KDM2B
C1orf198
GNAI2
DTNA
ADAR
CCN2
CER1
C8orf58
EPHB3
SYN3
DHDDS
SLA2
FOXD1
SGMS2
ADA2
EPB41L1
SRCIN1
L1TD1
ZNF304
LYPD6B
PRDM14
NECTIN1
LRAT
MAP6
ECT2
LRTM1
DDX43
MMACHC
KDM3A
ZNF532
ZNF536
ABCB5
GTF2I
CARHSP1
CACNA1S
OCSTAMP
ERMN
LMNA
AASS
MACROH2A1
SLC33A1
TRIML2
VPS37B
WBP1L
VENTX
CAPN3
PGBD5
TIAM1
UNK
H3-3B
KLF3
CSF2RB
DLL1
PCYT1B
CHFR
HES5
ZNF296
PANK4
GEMIN7
TJP2
FRG2C
CXADR
NPSR1
ANKRD6
PUF60
AEBP2
SMIM14
SNX19
BCAT1
CCDC169-SOHLH2
CCDC169
JPT1
RGPD1
DACT3
FAM181A
WDFY2
SLC10A2
NWD1
ZNF195
SRP68
AUH
SALL3
MAGEB2
PAFAH2
LIN28A
SMAD3
ANK2
FXYD5
GLI2
MRS2
KRT6B
RAX
SLC46A1
LIPK
CRISPLD1
LRRTM4
PPP2R3A
LHFPL4
LRIG1
ZNF781
IL7R
NXPH2
NDUFV1
TRDMT1
PIN4
USP7
CACNA2D1
TMC5
CTBP2
ALDH1A2
MAST4
NTN5
STOX2
ITGB3
ZNF565
DPYSL3
FZD9
INO80D
MARCKS
RGPD2
PACSIN2
DIDO1
SENP2
TIAM2
TSPAN14
GABRQ
DHRS3
PDE1B
SLCO5A1
NEBL
BORCS6
INSM1
SALL4
EMSY
GABBR1
FAM20A
CCDC33
ACOXL
KLF6
TP53INP1
TGIF1
ABCC2
MOG
C20orf96
VOPP1
SIK1B
SIK1
RMND1
ARMT1
CDYL
GBX2
TNRC6A
TRPC4AP
OSBPL2
ATP6V1G1
CELSR3
ETFB
ESX1
TAGLN3
ANKRD40
NDUFAB1
H3C15
H3C14
H2AC19
H2AC18
SMPDL3B
IL21
TMPRSS9
AASDH
NKX2-2
DPH6
GCNT2
TMEM43
CHCHD4
DND1
SORT1
G3BP1
ZBTB45
SPATA22
LONRF3
DPPA4
GABPB2
SLC2A14
ZNF814
SYAP1
FAM24B
GLDC
GCSAM
SLC3A2
PCDHB8
PCDHB16
LEKR1
SLFN12
KLF7
DET1
TMUB2
PXDC1
SIX2
PTAR1
LRRTM2
CTNNA1
TET3
ISOC2
LLGL1
TRMT2A
RANBP1
RNF19A
FRG2
ZFYVE1
ACSL1
TP53
AK4
RNASE9
GABRB3
ARID5A
ZNF428
CDH10
ACCS
EPB41L2
SLAMF1
SPATC1L
SEC14L5
CCDC130
PCDH1
CHD7
PRRC2B
CCDC88C
FRS2
PDE4B
EPHA4
MID1
ABL2
TSPAN5
TMPRSS7
TLL2
BAHCC1
PREP
WDHD1
SOCS4
PPP1R18
NRM
ITPK1
ARMC12
RNF43
PCDH18
PITPNM2
VEPH1
LRGUK
DUSP12
C10orf95
ZNF875
CCL2
UPF1
ZBTB2
CCL26
WDR44
IGBP1
C22orf39
SPIRE1
PRKAG2
NUAK1
ETV6
TTYH2
KCNIP4
ZSCAN9
YIPF4
ARSL
KRTAP3-1
RBM20
RAB23
TRPM1
IFIT3
PSME3IP1
EXOSC9
TGIF2-RAB5IF
TGIF2
APOBEC3D
APOBEC3C
VASH2
FAM200B
JAG1
VEZT
FGD6
PHC2
NRXN1
SUCO
RHBDD2
TMEM114
CNGA1
PRND
ELOVL6
PLCH1
ITGB5
ZNF552
NATD1
RIF1
VANGL2
FGFRL1
CDC42EP4
SPAG9
PRKCA
NACAD
STX16
GADD45A
LRRC47
GFRA1
TNFSF8
DEFB114
DEFB113
LEFTY1
MNT
SAPCD2
NEK3
LOC150051
SYBU
ADGRL2
TRIP4
SLC25A11
RNF167
PAN2
IL23A
CNN3
PAK1
DLST
TLE3
RAPGEF5
FZD5
DENR
CD2BP2
MEIS2
PRR5L
NEDD9
IFI16
ANP32A
PDE4D
AHNAK
GSPT2
ZFP3
CYB5R2
BAIAP2
LCOR
TUT1
MVB12A
RARB
RAB30
COPZ1
SDCCAG8
CEP170
MIDEAS
OR6C3
IGFBPL1
RIMBP2
NEPRO
TCF4
STRA6
COL17A1
HDAC4
F11R
GSAP
RAB36
FZD7
TFE3
SLC2A10
CRB2
TRIT1
BBC3
TLE1
CDC25A
DTX2
GRHL2
ZMAT2
DNAJB1
TCF12
HLTF
RPL27
PDHA2
YAF2
WDR36
THRB
NIPAL1
RNF186
PES1
ZNF254
AHCYL2
SPATA12
MEF2C
HOXB1
DPP3
ZBTB40
UBAP2
TFDP2
CUBN
AKIRIN2
ZNF358
DHX8
PKNOX2
MEX3D
PTGS1
EGR3
TLX3
HELLS
GPR179
CTTNBP2NL
AKAP9
MOSPD3
PDGFA
ZCCHC3
RAB17
MTUS1
KIAA1522
LNX1
PTTG1IP
RESF1
PWWP2A
DISP3
NFE2L1
CPA5
ERGIC2
HSBP1L1
FZD3
CFAP20
FGF6
ANKHD1-EIF4EBP3
ANKHD1
CLCF1
RPL23A
RAB34
IPO11
SLC23A2
MTHFD1
CCDC167
SCOC
TNP2
PRM3
NUDT2
SINHCAF
RNF213
FGF19
PRUNE2
ABAT
IGFBP2
JPT2
ZNF202
ARSG
TCAF1
S100A16
TMEM132B
ADGRA1
TBC1D23
VIM
SKIDA1
CAPZB
SPIC
KIF21A
TCN2
SDHC
MAP2
GAST
CCDC81
TFAP2A
TIA1
MBNL3
CNMD
RAI14
SMARCAD1
LYPD1
ARHGAP24
KNTC1
RIPOR3
PIF1
PEA15
RGS12
ID1
PYGM
PLEKHA5
LIMK2
ETV5
NCOA7
BAAT
CEP63
ANAPC13
MAP2K5
TCTEX1D4
SENP8
MYO9A
STK32C
LRRC27
ZMAT4
LRP12
NEUROG3
SEPTIN9
CCNT1
HECW1
ARF4
AKIRIN1
SYTL2
FAM153B
CAAP1
NKX1-2
PTPRN
KIAA2012
MEX3A
SEC22B
ASH2L
TSGA10IP
ZNF474
RERE
DNAJC7
ZIC5
ZFAND6
KLHL4
PAIP2
BRINP2
CUEDC1
EPB41L4B
TRPM3
GLIPR2
DHX9
TMSB10
RSPH14
ADRM1
PLPP3
FAM126A
DDX39A
DSCAML1
PRODH
LOC102724788
CHMP7
APOBEC3G
TCHP
SHROOM3
LPP
MTRNR2L9
KLF17
SYNPO2
SPHK2
RPL18
ID2
SMAGP
BIN2
LRP2
NFIB
ABCC10
FHL1
CSGALNACT1
RAD18
TNP1
METTL7A
SACM1L
UGT1A6
PCDHB13
ROR1
KCNMB2
PYM1
DGKA
ZSWIM4
NUP214
ALDH2
TKT
RBBP6
PIMREG
MUC20
LITAF
ERBB2
SLC6A8
PNCK
EHD4
ZNF763
CDK5RAP2
FAM107A
TUBA1C
SOAT1
SLC4A8
RPL8
JUP
ANO3
ZBTB18
FGF4
BFAR
FAM102A
YWHAQ
C2CD4D
ZNF664-RFLNA
ZNF664
SULT6B1