ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5716451 | Neural progenitor cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◣ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

GRK6
MTRNR2L2
MSH3
DHFR
MTRNR2L8
FOXO6
MTRNR2L1
G3BP1
GET3
DACT3
EMSY
CYTH2
RBBP6
SLC25A11
RNF167
ZNF576
IRGQ
PRND
CCT2
KIFBP
TMPRSS9
OSBPL1A
FAM102A
SLC25A25
NAIF1
HGS
ARL16
SPHK2
RPL18
ZBTB2
UNK
H3-3B
CLP1
SYAP1
ETV4
RFX4
DICER1
PLTP
ZSCAN18
HMGB1
SPATC1L
IREB2
CTNND2
CROCC
PIH1D1
ALDH16A1
PELI1
FAM227A
CBY1
WBP11
C12orf60
TESK2
NGDN
PNKP
NDRG4
REEP6
PCSK4
MEA1
TMX2
MED19
NRCAM
TBRG4
HEXIM2
CEP41
OSBPL2
CDK16
ETV1
MTF2
NF2
RAB36
RSPH14
BSDC1
PTMA
DHX9
CHMP7
PSMD3
CHN2
EPHB3
PPME1
C2CD3
MTRNR2L9
PFKM
HNRNPH1
YLPM1
GPC4
RTN4
HSPH1
H2AZ2
BTG1
SDCCAG8
CEP170
INTS9
HMBOX1
HNRNPL
TMUB2
NUP214
IPO11
PWWP2A
TPCN1
IQCD
TMBIM6
KIF5A
DCTN2
NRARP
TBC1D10B
MYLPF
DYNLL1
CCDC169-SOHLH2
CCDC169
SORT1
CACNA1S
SENP8
MYO9A
ZBTB45
TRIM28
EGR3
NRL
DCAF11
DIABLO
JOSD1
GTPBP1
CARM1
TOMM40
TAX1BP3
EMC6
AP3M2
TXLNG
TRDMT1
FZD9
EHD4
SUFU
ACTR1A
PIK3R3
CDK12
SPEM1
TMEM143
SYNGR4
MAD2L1BP
GTPBP2
UFSP2
C4orf47
ABHD2
RNF26
FAM120B
MRPL34
DDA1
LFNG
TMEM41B
TUT1
SHBG
FXR2
ELL
AGO1
RGPD1
RGPD2
PTH2R
ZNF672
FGD3
C19orf67
FGFBP3
CTTNBP2NL
NWD1
SENP2
SGCA
SPAG4
ACTR2
HNRNPC
GNAT2
AMPD2
HES5
PANK4
HACL1
BTD
ZNF286A
SAXO1
RRAGA
ETV5
ZCWPW1
MEPCE
TSPYL4
DSE
C1orf127
ARHGAP19
WDR81
DHX8
FAM181A
OGA
KMT5C
TENT5C
CNOT3
HDGFL2
MRPL45
ZNF775
RPL13
ZCCHC8
TPGS1
PPP1R16B
RFX1
NUBP1
RBM23
SELPLG
ZDHHC5
NKX2-2
KPNA2
SHC1
CKS1B
USP44
STAG3
GPC2
TEPSIN
NDUFAF8
TCTN3
PODNL1
DCAF15
C8orf58
PIN4
ZFC3H1
THAP2
ANKRD6
RFX2
ETFB
TOMM40L
APOA2
VEZT
FGD6
HES6
WBP1
INO80B
LSM10
ZSCAN20
ABCB4
TRIM2
MEX3D
RBM39
SLC25A44
PIF1
TEX50
CDC5L
RNF169
TUBB
MDC1
LRRN1
IFRD2
SPRY4
CHD6
MSANTD4
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
DMWD
GNA12
NEURL4
RPS13
MUC1
NOTCH1
PIK3C2A
POLDIP3
NOL4
BMF
CCDC61
ZSCAN2
PLEKHB1
CTBP2
TP53INP1
RAB5B
BAIAP2
PC
MPRIP
HYAL1
NAA80
HYAL3
RRP9
PARP3
MYCL
BANP
WDFY2
CRISPLD1
PSME2
EMC9
RNF31
PAIP2B
MICOS13
HSD11B1L
DDR1
DNM2
LRRC23
TBC1D31
SELENOF
HS2ST1
AQP5
FBXO46
MEIOSIN
JOSD2
ASPDH
GFRA1
KIAA0895L
EVI5L
KLF1
GCDH
C12orf71
EPRS1
UVRAG
WDR49
SLC33A1
LYSMD3
SMUG1
RPS23
ATP6AP1L
SESN2
TMEM256
NLGN2
XPC
LSM3
SP1
NUP62
IL4I1
ATF5
PPP2R1A
TCF4
DOHH
ZNF195
H3C15
H3C14
H2AC19
H2AC18
ZFYVE1
CDC25A
CLPB
KHDRBS1
COMT
TMEM91
B9D2
MAMSTR
DUSP1
LRRC45
CENPX
FGD4
ZNF358
ZNF548
ASMTL
NEMP1
DDX17
TPST2
CCN2
H2BC8
H2AC8
KBTBD6
VPS26C
ZBTB20
SEL1L
NDUFB5
MRPL47
SOCS3
MOSPD3
CLIP1
TAF13
PRCC
NDUFS8
MRPL24
HBP1
CPA4
RNF5
AGPAT1
GGPS1
ARID4B
CDH2
KDM2A
VPS37B
ERGIC2
MAFG
WDR59
UBE2S
RPL27
KNTC1
PDP1
BLOC1S4
HIF1AN
JAG1
TRAPPC3
RPUSD4
FAM118B
NDUFA5
TICRR
ELK1
HEXIM1
KHSRP
NSUN3
DHFR2
ZNF48
BABAM1
CELSR3
ILF3
SRRM1
HDAC9
IER5L
TAGLN3
TRIOBP
BRCA1
MPV17L2
FAM219A
DNAI1
CRB2
TSNAXIP1
RANBP10
SPAST
NAA40
TRMT1L
SWT1
ZNF823
EHBP1
SYMPK
FOXA3
CD2BP2
SINHCAF
FAM185A
TOR2A
TRAF7
ATF4
MARCHF9
CDK4
SRF
SLC35E2B
RAB5C
WBP1L
MUS81
CFL1
ALDH2
LUC7L2
FMC1-LUC7L2
FMC1
SF1
PYCR3
MMRN1
NASP
NNMT
TREX1
NFATC2IP
MEGF8
EPC2
KIFC1
VIM
ITGB1
NBEAL1
GID4
ATPAF2
NCLN
IQCG
RPL35A
ADAT1
MMACHC
SIX2
VEPH1
COPZ1
RAG2
IFTAP
PHF23
GABARAP
CCDC146
PIP4P1
RBM15
SLC35B4
LPIN2
ZSWIM4
DNM1L
KBTBD3
AASDHPPT
BBS7
RPS11
DGLUCY
CCNT1
SDCBP
IP6K2
GHITM
CIC
PCF11
UBXN4
RPS6KA5
NUMB
SMARCAL1
PHB2
UBE4B
H2AX
RPL29
LIN52
ALDH6A1
ZNF653
ARIH1
PCDH8
PRKRIP1
ING4
RLF
ELP5
CTDNEP1
ZNF547
TRAPPC2B
SPC24
BFSP1
CAMTA1
DNAH1
COX8A
IPO4
SPRING1
RNFT2
PRPF38A
ORC1
EXOSC5
BCKDHA
PITX3
GBF1
PPP1R35
SORBS2
SMARCAD1
PPP1R15A
PLEKHA4
CALR3
C19orf44
LMNA
VGF
ABCG1
CNIH4
TMEM109
TUBA1A
E2F1
KATNB1
PI4K2A
DTD2
GNB2
PKNOX1
IFRD1
MID1
ZMAT2
ZBTB38
C1orf189
PANK2
ZNF189
MRPL50
ERCC6L2
CDK5RAP3
EMC3
PDXP
TSPYL1
POLRMT
GADD45A
SCOC
MTCH2
MEX3B
GOLGA5
USP1
TCERG1
FOS
DAD1
INTS4
ESYT1
FLAD1
ADAR
TRAK2
STRADB
SIRT4
PHF12
MXD1
KRT23
PPP6R3
SAC3D1
MTMR12
TLE3
JPT2
UBQLN4
LAMTOR2
UBR2
TENT5B
GADD45B
MAP2
RND1
EEF1AKNMT
MAGI1
STRADA
PTP4A1
CNN3
DISP3
CFAP20
ID4
SMARCB1
SRP14
PUM3
BBS12
RAB8A
PRKAG2
PRICKLE3
STAP2
MPND
LMAN2L
PCNX3
MAP3K11
LARS1
ZNF513
WDR87
SIPA1L3
MAP2K7
HIBADH
CDC6
UBE2F
PDE4B
PAIP2
ZFP36L1
RRBP1
ORAI3
POLR3H
CLEC11A
SIDT2
ZSWIM1
FBXL19
ANK2
CDK5RAP2
VMP1
PTRH2
CX3CL1
EIF3F
WDR19
MECP2
SCHIP1
KANSL1L
TCIM
KMT5A
PCBP2
PKD2L1
SNRPD2
QPCTL
ARFGAP2
FBXL12
TTF2
TNMD
FANCC
PCM1
OSBP
TULP2
NUCB1
FRAT1
NUMA1
LRTOMT
DDX39A
PRPF19
ATG2A
KIF3C
PGM2L1
RC3H2
NAA35
E4F1
DGUOK
PSENEN
LIN37
RPS26
PMM1
ERCC1
ZFHX3
TRIM48
PTBP1
ZSWIM8
CHCHD1
U2SURP
MORF4L2
POLK
CERT1
PSMC4
PGM1
CEMP1
ALK
PCYT1B
NXPH2
NEBL
TMEM114
MTRNR2L10
GPBP1
EFHC1
MED25
FUZ
BAHCC1
PTTG1IP
SRPRA
SLC4A2
CDK5
ZBTB5
DDX49
COPE
HSPA1B
EIF3L
ANKRD54
PDK3
WBP2
DGAT1
EFCAB6
CUL3
TBC1D23
RUFY3
TSPAN19
LRRIQ1
MGAM
TEX2
UBL7
PGAP2
PGP
BUB3
BRICD5
CENPC
TSPAN17
ARMC12
RERE
C10orf120
FRMPD2
ABCA5
NR2F1
HNRNPUL1
DUSP7
RPS24
POLR3A
CCNG1
WIPI1
RACGAP1
EFR3B
CAMK2D
C16orf91
RALGAPA2
ACTN4
SACS
NES
LRRTM3
LRFN3
CHD2
ZBTB37
MRPL17
DBN1
ZNF138
TRAPPC6A
BLOC1S3
PPM1E
EGLN2
PPP4R3B
SASH1
BORCS6
ABAT
TMEM132B
RSF1
AAMDC
PKIG
FABP7
FOSB
GPR180
COQ5
ZNF417
RNF10
DUSP6
ZNF254
ANKHD1-EIF4EBP3
ANKHD1
TCF7L2
EP300
ERICH6B
USP30
EIF4A1
DAZAP1
GPR3
KBTBD7
KDM4B
RGS3
NARF
SDE2
TM9SF4
MRPL2
KLC4
YIF1A
TMEM151A
WDR74
ITGB8
SCAF11
KIF27
NBPF1
FAM98A
BRD3OS
ZSCAN9
EXOSC9
LRP2
ANK3
IKZF1
NEK6
SSR4
IDH3G
LYRM7
SLC39A9
ERH
FH
HP1BP3
TMEM151B
NFKBIE
AP3D1
CCDC181
EPB41
FAM187A
EFTUD2
CCDC103
PKD1
DPP3
MCM10
PPP1R21
GPAT4
L3MBTL2
DOT1L
ZNF593
C1orf232
SNX1
CIAO2A
XAB2
PCP2
DNAJC12
METTL16
DHX16
C9orf85
ABHD17B
TUBB4B
ZNF862
NPAT
ATM
CAPZA2
TTYH1
CHD8
COL4A2-AS2
ZSCAN31
SPTBN1
WDPCP
DNTTIP2
MDH1
UBALD1
TAB1
SNAPC3
DTNA
ESRRA
CATSPERZ
NEDD9
VXN
TMEFF1
ZNF140
CBX5
ANKRD36
ABI2
HNRNPA1
DMXL1
USF3
WASHC3
ZBTB48
CXXC1
PARS2
ETFDH
C4orf46
ADNP
ILF2
C2orf80
STAU1
RBM22
MAP3K13
ENSA
DDX27
ACTL6A
AKTIP
PSMC5
FTSJ3
SAP30BP
RECQL5
LRRTM2
CTNNA1
NATD1
ZNF738
PGLS
PPP3R1
CREM
EPHB1
UBE2C
STARD4
RPUSD1
MFN2
KAZALD1
CHTF18
LMCD1
FZD7
ALDH3B1
NME1
ADGRB2
ZNF764
NBAS
LYPLA1
CDCA4
GPN3
FAM216A
TMEM115
STX12
P3H1
SUCLG1
ID3
FZD2
TIAM1
LOC150051
AKAP9
LDB1
PEX11G
ZNF416
FEM1A
MRPS14
TPRKB
COG3
NDUFAF5
ESF1
USP54
UPF3B
UBA52
RMND1
ARMT1
PDIA4
CEP63
ANAPC13
SLC26A8
MAPK14
TNRC6B
MAGT1
COX7B
SPARC
CACUL1
SMPD2
PPIL6
FZR1
RING1
HSD17B8
HNRNPR
RPL21
RPL9
LIAS
PCBP3
RFWD3
ALG8
DPYSL5
EBNA1BP2
CFAP57
ATG5
UFD1
CDC45
CCDC130
NUDT2
ANP32E
INTS12
GSTCD
ZNF709
KIF24
ZNF84
RFC2
BAG6
APOM
ISY1-RAB43
ISY1
TM2D2
ADAM9
SLX4
FICD
ARL13B
RNF40
CCDC189
SPSB2
UBL5
EIF3D
SYNCRIP
DENR
PES1
SALL2
MEGF9
ACYP2
TMEM258
FEN1
SARNP
ORMDL2
PSME4
VTA1
NMBR
JAM2
PMVK
FTSJ1
SPATA24
GTF2H2
POLR2E
CHMP5
BAG1
RBX1
PLAGL1
ZNF304
SAPCD2
ARF4
ZNF106
SNAP23
GDF5
CEP250
TUBG1
RETREG3
YPEL1
IFI6