ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047416 | hESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◣ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

BFSP1
DICER1
FIGNL2
SACS
OSBPL1A
PDPN
WFDC8
PGPEP1
CAMTA1
DDR1
CACNA1S
PLEKHB1
FAM181A
SOCS3
C1orf127
PRR5L
POSTN
ZFHX3
IFRD1
METTL11B
TMPRSS9
IL7R
NES
NWD1
DTNA
NFE2L1
SIK1B
SIK1
MTRNR2L8
GFRA1
CUBN
MUC1
TPST2
COL17A1
CTNND2
GPC4
DNMT3B
TP53INP1
CCDC81
TNP2
PRM3
LIMCH1
PAFAH2
CHN2
LRTM1
PKNOX2
TTYH1
CTBP2
PTTG1IP
AHNAK
PCYT1B
ITPRIP
ABAT
AGO1
ZBTB18
SLC35D1
KIF6
NKX2-2
FAM120B
TOX3
ANO3
CFAP77
FAM107A
FZD9
MTO1
LFNG
ACVR1
FZD3
TAS2R60
PTGS1
PREP
TTYH2
LOC645177
C12orf77
VEPH1
SPIRE1
RGS12
RNF175
DHX9
AKAP9
VIM
MTM1
SLC34A2
TRIM62
HMGB1
TNC
HDAC9
NUP214
PDE4B
LRRC2
BPNT2
TMPRSS7
NRCAM
EPB41L2
FRMPD2
ZNF775
ARHGEF37
USP44
MTF2
JPT2
LRRN1
MMRN1
DNMBP
PLEKHG1
LRRTM3
KIF21A
WNT5B
NEK3
GAS2L3
OSBPL2
PTPRD
MYO15A
RGS3
LZTS1
DGLUCY
OCSTAMP
TCF20
NDUFS5
PTGS2
BIRC2
ATXN7
CRB2
ETFB
ZNF593
C1orf232
PPP1R16B
PIPOX
TFDP2
TRDMT1
ST18
PRTFDC1
LCOR
MUC20
MAP2
SPATC1L
EMID1
ZNF474
GBX2
CLIP1
CHD7
DSCAML1
THRB
KCTD6
CYB5R2
TMEM114
PLAGL1
SAMD5
OR5AR1
PALM2AKAP2
AP5S1
PPM1L
GPSM3
PATL2
SELPLG
MYCL
POU3F4
PRKAG2
C8orf58
ZFAND6
NEDD9
HES3
ICMT
RFX4
ALDH3B1
LYSMD3
CX3CL1
GXYLT2
BTBD11
VSTM2L
DCT
AGMO
SORBS2
MARK2
RNF165
RRAGD
SALL2
C9orf153
BAIAP2
TAB2
SASH1
MID1
TMEM132B
PRSS23
BTBD3
CRISPLD1
LMCD1
TMEM47
OR56B1
SOX6
STOX2
PCDH18
ZNF69
IGFBPL1
FGD4
DHX32
PKIG
PREX2
ARHGAP24
TIAM2
TAGLN3
CNN3
DLG2
PPP2R2B
STK31
TCF12
IPO11
TRIM8
SLAIN1
WDR49
PRKCA
SLC10A2
CCDC88C
ARMC12
TCTEX1D4
CENPA
PLK3
CXADR
PAPLN
MSH5
CLIC1
SPEM1
PES1
TCN2
SERTAD2
NDRG4
FRRS1
CPA4
TMCC1
LMNA
MEX3A
RARB
NUDT2
KLHDC8B
APBA2
PURB
ABHD11
IGF2BP1
ARID5B
EFCC1
CFAP92
FAM102A
ZFC3H1
THAP2
CDON
CROCC
PEA15
ONECUT1
GPM6B
CACHD1
BCL9
ZNF346
ZNF367
SORT1
SLC4A8
SENP8
MYO9A
GJA1
ADA2
RING1
HSD17B8
ETFDH
C4orf46
FAM227A
CBY1
HGD
MTUS1
FGF13
PACRGL
ADGRL3
DNAI2
ATP1B4
CELF2
SH3BP4
SOX2
ZNF254
ERBB4
COL4A2-AS2
CPA5
SPATA13
VXN
KIF26B
GRK6
TMPRSS5
ERICH6B
APPL2
FECH
C21orf62
ANKRD6
SYAP1
SLC6A9
PAM
DNAH1
ALDH7A1
ZBTB20
TRDN
PDE4D
SPTLC3
ZHX3
WBP1L
TMSB10
LRIG3
GPR82
DTX4
RUFY3
ZNF304
GSN
MAP1B
INAFM2
PDHA2
MGAM
C1orf189
ZSCAN10
MEF2C
CXCR4
SRSF7
TIAM1
LOC150051
NUFIP2
RERE
TMEM41B
RASAL2
CXCL2
ENOX1
MGST1
PLEKHG3
PHC2
DLL1
NUAK1
ADGRL2
ANK3
CDIN1
FOXP2
MOSPD3
EPB41L1
PSME3IP1
PTH2R
FSIP1
VPS37B
UFD1
CDC45
C2orf80
ZNF362
NDUFB5
MRPL47
KCNN3
EBAG9
MAPK8
CYP1A1
FRS2
GNAI2
TSPAN14
RGMA
PHF5A
ACO2
GADD45G
LRP2
SAXO1
RRAGA
KDM3A
PTPRZ1
PDE1B
BMX
CCN2
ETV4
VAMP8
VAMP5
NADK2
BTBD17
COL14A1
PIK3C2A
HLTF
CEP41
STRA6
G3BP1
JAKMIP2
SAPCD1
SPATA22
LLGL1
KLF3
ANKRD40CL
NFASC
FRRS1L
MYH7B
GSS
SERPINB12
MKRN3
BMPR1B
FLVCR1
TMEM150C
SPATA2
SDCCAG8
CEP170
EGR3
BCAT1
NOSTRIN
GAS8
DBNDD1
LDLRAD4
CDK5RAP2
KRTAP19-2
KRTAP19-1
DACT3
GLCCI1
FIGN
SLC6A1
PRND
FZD2
VMP1
PTRH2
TUB
ACSS1
TSPAN19
LRRIQ1
NR2F1
NAV2
RIPOR2
C20orf96
IKZF1
TOMM40
YIPF3
POLR1C
SLC3A2
SYT2
PTPRA
COA8
BAG5
MMP10
PRLR
BEND3
DOCK9
LOC100509620
CTNNA2
LRRTM1
C1orf198
CLEC18B
ID3
FOXP1
FRZB
ZNF609
CLEC18A
ARIH1
XYLT1
PHLPP2
KLHL38
RORA
TEX2
NEK6
TBXAS1
KYNU
HIPK2
GEMIN8
N4BP3
PTPN18
TNP1
ZNF195
MED25
FUZ
ADAM20
ABCB4
EDN2
SLC29A2
FOCAD
TOP2A
ABCG1
PCDH8
CDH17
KDM2A
IGFBP2
PYGB
B3GALT5
GET3
TESC
ZSCAN2
TNIK
ABCA5
WDR74
CD2BP2
ANP32B
DPP4
NKAIN4
DDAH1
PIK3R3
CCT2
ZSCAN18
PER2
GAA
FGD3
RAI14
RPH3A
MAP2K5
TUBB
MDC1
NR4A3
DDX17
HMOX1
UBE2Z
AASDH
CARHSP1
UNK
H3-3B
RIIAD1
CELF3
SHC3
ID4
SRP9
ARHGEF26
RNF19A
PANK2
PHYHIPL
RAB36
RSPH14
SLC2A10
CDK6
OLFM4
DOK5
PMEPA1
SHROOM1
SERINC2
MYLK4
HIP1R
ZCCHC8
ELOVL6
CLEC3A
FBXO10
NIN
MBP
CAPRIN1
IFIT3
KLHL36
GRHL2
DMBX1
TRIM2
ABCA1
ARHGEF38
VASH2
CHD9
CLEC18C
FGFRL1
PSRC1
PCDH11X
FGF10
DMD
RNF43
SLC6A8
PNCK
LRRC8B
ECM1
RGS20
RBFOX2
NRXN1
RIPOR3
FGFR3
XAF1
BBC3
BCL2L11
MAPK10
SGCA
CA14
FMN2
DHRS12
TNMD
ADPGK
JAM3
PHKB
ITFG1
FLJ44635
COL11A1
ZFYVE1
ITGB8
NNMT
GDPD2
RAB30
ELMO1
MAMDC2
ERMN
SCGB3A2
ACTR3
HACL1
BTD
BCAR1
SLC16A13
JAG1
FZD7
RHOJ
ADGRA1
APC2
NR2F2
CTTNBP2NL
SNRPN
OR6C3
AKAP6
VCAN
MAST4
ZNF292
RDH12
ZNF608
STK32C
LRRC27
DCDC2C
HDAC4
GNAT2
AMPD2
ZSCAN9
CPE
ME2
SHF
GLI2
GALNT12
MAP6
LNX1
FRMD4A
PDE1A
LOC389895
ZCWPW1
MEPCE
LIN28A
PLP1
MALRD1
TKTL1
ZNF428
NBEAL1
DHRS3
EMSY
TMEM255A
PTMA
PPBP
PF4
LAMP5
DYRK1B
DOP1B
SLC25A11
RNF167
CARD14
CHD1
NXPH2
HSPH1
ARF4
CNKSR2
PRKRIP1
FOXJ1
TAFA5
ASPN
LIX1
C12orf71
NCKAP5
FREM1
TNFRSF21
ITPRID1
GABBR1
SLC7A5
LAMA4
ONECUT2
PIAS1
PDPK1
PI15
ARID2
BCOR
SMAD3
ZBED4
HES5
PANK4
ZBTB26
SON
GART
SFRP2
SMARCAD1
PJA2
WASF3
INPP5F
CELSR3
TUBA1C
FZD8
RBM20
COMT
NAT16
THAP11
NUTF2
CENPT
ADAR
C7orf33
CDH7
GADD45A
CHI3L1
ZBTB2
CAPS
ADARB1
HGS
ARL16
CSRNP3
NSD3
LETM2
TESMIN
TESK2
LRIG1
TNFRSF11B
COLEC10
PCNX1
DUSP6
PLCH1
VRK2
TMEM169
PECR
POMGNT1
DCPS
ALOX5AP
WDFY2
GSAP
DDX5
CEP95
FAM174A
ARHGAP18
APOLD1
CDK12
CRIP2
PLCE1
GABRR2
SIX2
PTCH1
VWA5B1
PMFBP1
SLC33A1
CSPG5
ABL2
CLCN5
KIFBP
KIAA1958
C9orf147
GSE1
TMEM94
ENPP2
FGF2
DGKB
CHMP7
PBXIP1
TTF1
BANK1
MTCH2
CST2
HECTD2
PCDH1
OR5A2
TREX1
SMC3
TENM3
TPCN1
IQCD
MAPK1
EPHA4
FAM81B
FABP7
NDST1
TUT1
TSPAN5
SPHK1
SPARCL1
RBBP6
RAG2
IFTAP
FGFR2
GNG2
ZNF358
KIF2C
PALLD
TACC1
IFI16
PYDC5
CDH10
TRABD2B
VEZT
FGD6
FJX1
ADNP
FRMD5
FHL1
PWWP2A
CDH2
ISCA1
HHIP
IRF2BP2
RTL8B
ZNF709
UQCRQ
GDF9
MNT
ST7
MTHFD1L
SPRY4
ZNF219
TMEM253
GK2
UBE2K
CLASP2
REST
CMC1
ITGB3
LITAF
BBS7
ZNF737
TFEC
CNTN6
PPME1
C2CD3
BAZ2B
PRMT8
FAM149A
KCNJ1
BSDC1
NREP
RUBCNL
SPDYA
STOML3
FAM155A
KLF6
PELI1
BZW2
ANKMY2
TLK1
REM2
CRYBG2
SNAPC3
RIMBP2
PTPRE
ANK2
UBQLN4
LAMTOR2
CDK16
YPEL3
TBX6
FRY
UFSP2
C4orf47
GAST
PYGM
GCNT2
ATN1
DNAJA2
BSX
TMX4
LANCL2
ETV1
MYO9B
HAUS8
LYPD6B
SLC7A11
RALGDS
CCDC174
FOXO6
CCDC167
MCM10
FRAS1
CALD1
WNT6
JHY
KDM2B
UBAP2
SNX1
CIAO2A
TSPYL4
DSE
ZSCAN31
ATF7IP
NAV1
BRINP3
ITPK1
ENO1
MRPL44
SSH2
EFCAB5
C3orf49
SYBU
RAB15
ZNF385B
NCALD
PPP1R18
NRM
DCDC1
RAPGEF5
CFAP20
ANGPT1
SHROOM2
ERGIC2
TNIP3
MRTFB
ARL14EPL
COX14
SPECC1L
CCDC33
TEX50
PTK2B
CCDC171
JAM2
LRAT
CRB1
MARCKS
MRPS2
C9orf116
SMPDL3A
RBM38
MICAL3
ZNF704
ESRRG
HSPA13
ZBTB38
VAV2
FAR2
ABLIM1
IL12B
HACD4
TRIP10
MFSD14A
CYTH2
BORCS6
KCMF1
PACSIN2
SH3PXD2A
THRA
PRICKLE2
CEP295NL
A2M
MUSTN1
ITIH4
ADGRD1
FIBCD1
FAM204A
AGO3
PCOLCE2
COX8A
ACOX3
TRMT44
BCL11B
PKD1L2
TREM1
MSANTD4
ZNF627
RBPJ
SLC17A9
CBY2
H2BU1
H2AW
RABGAP1L
CALM2
MS4A4A
IRX5
NF2
WBP11
C12orf60
TEPP
REV3L
TP53
ZNRF3
CALCRL
WRAP53
ZNF548
ARMC4
INSM1
NFAT5
ZNF180
CHD2
ENOX2
PGBD5
GP5
TMEM143
SYNGR4
TENM4
GLIPR1
TOP2B
NKX6-3
NCLN
COL4A2
COL4A1
TRAM1
CCDC130
KNTC1
SCOC
ZNF763
CORO2B
SPHK2
RPL18
RCN1
ACSL6
KLHDC8A
PEX11G
SFPQ
SPPL2B
LSM7
NKX2-8
TOX
LTBP1
MCCC1
MOB1B
PHF23
GABARAP
KHDRBS1
SCML4
FGFR1
PLXNB2
WLS
DPH6
NMU
CTSZ